DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PYRCJ (Probable spermidine synthase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=speE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.364e-16 Identity = 44/132 (33.33%), Postives = 76/132 (57.58%), Query Frame = 3 Query: 261 IPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV-PGWLKDP 653 +PG + I P+ + +K+ I KS YQ +++ + YG+VLILD IQ + DE Y E + H + + PNP++VL++GGG+G LRE +H +V++ + +ID+ ++ + + P + G DP Sbjct: 4 VPGPITLIEPLSGNTSLLIKINAIHSVKKSPYQEIIIADTEDYGRVLILDDYIQSSYVDEQYYHESLVHPAMATHPNPRDVLILGGGEGATLREALKHGTVKRAVMVDIDRDVVELSRAYLPQMHQGAFDDP 135
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XANCP (Spermidine synthase OS=Xanthomonas campestris pv. campestris GN=speE PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.270e-15 Identity = 39/111 (35.14%), Postives = 69/111 (62.16%), Query Frame = 3 Query: 300 GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 G A ++ L + +S +Q + ++Q++ +GK++I+DG + LT RD Y EMI+H L + PK V++IGGGD LRE+ +H VE +ID+ ++ +++FP++ Sbjct: 16 GSAIGYRISGKLDEVQSPFQKIEIYQTTDWGKLMIIDGAVMLTSRDNFFYHEMISHPALFTHAAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPEL 126
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XANCB (Spermidine synthase OS=Xanthomonas campestris pv. campestris (strain B100) GN=speE PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.270e-15 Identity = 39/111 (35.14%), Postives = 69/111 (62.16%), Query Frame = 3 Query: 300 GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 G A ++ L + +S +Q + ++Q++ +GK++I+DG + LT RD Y EMI+H L + PK V++IGGGD LRE+ +H VE +ID+ ++ +++FP++ Sbjct: 16 GSAIGYRISGKLDEVQSPFQKIEIYQTTDWGKLMIIDGAVMLTSRDNFFYHEMISHPALFTHAAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPEL 126
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XANC8 (Spermidine synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=speE PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.270e-15 Identity = 39/111 (35.14%), Postives = 69/111 (62.16%), Query Frame = 3 Query: 300 GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 G A ++ L + +S +Q + ++Q++ +GK++I+DG + LT RD Y EMI+H L + PK V++IGGGD LRE+ +H VE +ID+ ++ +++FP++ Sbjct: 16 GSAIGYRISGKLDEVQSPFQKIEIYQTTDWGKLMIIDGAVMLTSRDNFFYHEMISHPALFTHAAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPEL 126
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PROM5 (Spermidine synthase OS=Prochlorococcus marinus (strain MIT 9515) GN=speE PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.658e-15 Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 327 KILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPG 638 K+L + S +Q +++ +S YGK L+LD + RDE Y E + H L SI +L+IGGGDG RE ++S VEK D+ EID+ K K+F ++ G Sbjct: 22 KVLLKKNSKFQEILIIESDYYGKALMLDRCWMTSMRDEKYYHECLVHPALSSIKEKSRILIIGGGDGGTARECLKYSQVEKIDLVEIDEEVIKASKKFLQEIGG 125
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PROM9 (Spermidine synthase OS=Prochlorococcus marinus (strain MIT 9312) GN=speE PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.828e-15 Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 327 KILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPG 638 +IL + S YQ ++V ++ YG+ L+LDG + +DE Y E + H L SI NVL+IGGGDG RE ++ + K D+ EID+ K+ K+F ++ G Sbjct: 22 EILIKQNSKYQEIIVIENEYYGRALMLDGCWMTSLKDEKYYHECLVHPALSSIDEKSNVLIIGGGDGGTARECVKYPQISKIDLVEIDEEVIKISKKFLKEIGG 125
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THEVO (Probable spermidine synthase OS=Thermoplasma volcanium GN=speE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.694e-15 Identity = 52/132 (39.39%), Postives = 71/132 (53.79%), Query Frame = 3 Query: 258 VIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPN-PKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKD 650 +I WFSE S +V L K+DYQ + +F + +GK+L +DG +QLTERDE Y E+IT +P N P++ LVIGGGDG R + + K EID +V K+FFPD+ D Sbjct: 3 LIENWFSERYS--DNLQLSFRVSDQLLSIKTDYQRIDLFDTYDFGKLLAIDGTVQLTERDEYIYHELITMIPYHMTKNPPQSALVIGGGDGGAARRL-LDLGLNKIVNVEIDGQVVEVSKRFFPDLSSAFTD 131
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THENV (Probable spermidine synthase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=speE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.694e-15 Identity = 43/131 (32.82%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 264 PGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV-PGWLKDP 653 PG S I P+ A +K+ + +S YQ ++V + +G+ LILD IQ + DE Y E + H + + P+P +VL++GGG+G LRE+ +H +V++ + +ID +V +++ P + G DP Sbjct: 5 PGPISLIEPLSGNSALLVKINAVYVVKRSRYQEIVVADTEDFGRALILDDYIQSSYYDEVYYHESLVHPAMSTHPSPADVLILGGGEGATLREVLKHRTVKRAVMVDIDGDVVEVARRYLPQMHQGAFDDP 135
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFT (Spermidine synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=speE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.824e-15 Identity = 43/128 (33.59%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 WF+E G A +V L + +S +Q + ++ S+ +GK++++DG + LT RD Y EMI+H L + PK V++IGGGD LRE+ +H +E+ +ID+ ++ ++ FP++ DP Sbjct: 7 WFTEHFQT-TGSAIGFRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDP 133
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFM (Spermidine synthase OS=Xylella fastidiosa (strain M12) GN=speE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.824e-15 Identity = 43/128 (33.59%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 WF+E G A +V L + +S +Q + ++ S+ +GK++++DG + LT RD Y EMI+H L + PK V++IGGGD LRE+ +H +E+ +ID+ ++ ++ FP++ DP Sbjct: 7 WFTEHFQA-TGSAIGFRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFIYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDP 133 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |