DY258713

Overview
NameDY258713
Unique NameDY258713
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1104
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.920e-18
Identity = 70/213 (32.86%), Postives = 106/213 (49.77%), Query Frame = 3
Query:  123 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPT----HNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKK----GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN---FQDNWIYWV 728
            ++  +AEF++T LF++  + + +  +K T+  A    G+  IA   G  +   V   A ISG H+NPAVTFGL L  ++++   +FY I Q LG+I    ++K    GL +      +                  TF LVYTV+ +A D K+      +  +AP+ IGF V    LA    +G  +NPARS G AV       + D+WI+WV
Sbjct:   53 YRPGIAEFVATFLFLYISILTVMGVSKSTSKCAT--VGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWV 261          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.920e-18
Identity = 70/209 (33.49%), Postives = 100/209 (47.85%), Query Frame = 3
Query:  135 LAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTH--------NXXXXXXXXXXXXXXXXXTFGLVYTVYATAA----DPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYW 725
            LAEF  TL  V+   GS +A N   +D  +    +  I +  GFA    +   + ISG  +NPAVT G    G++ IL GI + I Q +G++V + ++K      ++PT                           T  LV+ V   A     DPK   +  +AP+AIG  V A +     F+GGS+NPARSFGPAV S  +  ++IYW
Sbjct:   35 LAEFFGTLFVVYIVSGSTLAANFAVSDPIVR---VCLICLVQGFAFAAIIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKA-----SLPTFYERDLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPK---ISRVAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAVFSDTWHRHYIYW 232          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.814e-18
Identity = 66/202 (32.67%), Postives = 97/202 (48.02%), Query Frame = 3
Query:  138 AEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK-----VVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            AEF  T   +F  + + I   +           L+ IA   G A+ V V    +ISG H+NPAV+  + + G +     + Y  AQ+LGSI ASF +K     V  G + VP                    TF L++ + A A DP   ++  +  +A+G  +  N L AGP +G SMNPAR+ GPA+A+G +   W+Y V
Sbjct:   99 AEFFGTFTLIFTVLSTIIMDEQHKG-----VESLLGIATSAGLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGMYHPVNPGIVTVPK------VGTVEAFFLEFVTTFVLLFIITALATDPN--AVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGRYTQIWVYLV 287          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: NIP33_ORYSJ (Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica GN=NIP3-3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.981e-18
Identity = 66/211 (31.28%), Postives = 103/211 (48.82%), Query Frame = 3
Query:  111 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK-----VVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            S+   K   AEF  T + +F  + + I   +  +   L     + IA   G A+ V V    +ISG H+NPA++  +A+ G +     + Y  +Q+LG++ ASF +K     V  G + VP                    TF L++ + A A DP   ++  +  +A+G  V  NIL AGP +G SMNPAR+ G A+A+G +   W+Y V
Sbjct:   63 SVPLLKKVSAEFFGTFILIFTVLSTIIMDEQHKSIETL-----LGIATSAGLAVTVLVLSLIHISGCHLNPAISIAMAVFGHLPSAHLLPYISSQILGAVAASFAVKGLYHPVNPGIVTVPN------VGTVEAFFVEFIITFFLLFIITALATDPN--AVKELIAVAVGATVMMNILVAGPSTGASMNPARTIGAAIATGRYTQIWVYLV 260          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.981e-18
Identity = 68/215 (31.63%), Postives = 102/215 (47.44%), Query Frame = 3
Query:  105 SFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG---GLAVPTHNXXXXXXXXXXXXXXXXX----TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            S S+   +  +AEF+ T   VF G  S +    M  D  +   G   IAI  G  + V +    +ISG H+NPAVT   A  G+  +     Y I+Q++GS +A+  L+++ G    +    H+                     TF L++ +   A D +  ++G +A +AIG  V  N+L A P S  SMNP RS GPA+  G ++  WIY V
Sbjct:   48 SVSVPFLQKLIAEFLGTYFLVFTGCASVVV--NMQNDNVVTLPG---IAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNR--AIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYGCYKGIWIYLV 255          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 6.505e-18
Identity = 73/207 (35.27%), Postives = 103/207 (49.76%), Query Frame = 3
Query:  126 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPT---HNXXXXXXXXXXXXXXXXXTFGLVYTVYA-TAADPKKGSLGTIAPI--AIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            +A  AEF++T L+VF GVGS + +       AL PS ++ IAI       +AV +    SG H NPAVT    +G  I++   + Y  AQL+G+ V + LL  V  G    T   +                  T  LV  V+A T +    GS  T+  I  A+G ++G +      F+G SMNPARSFGPA+  G F  +W++WV
Sbjct:   25 RALFAEFLATGLYVFFGVGSVMRW-----PTAL-PS-VLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATMIGISVALGHLIGIH------FTGCSMNPARSFGPAIIIGKFTVHWVFWV 218          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 8.496e-18
Identity = 68/215 (31.63%), Postives = 103/215 (47.91%), Query Frame = 3
Query:  105 SFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG---GLAVPTHN----XXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            S S+   +  +AE + T   +FAG  +A+A N     A   P     IAI  G  + V V    +ISG H NPAVT   A  G+  +     Y I+Q++GS +A+  L+++ G    +    H+                     TF L++ +   A D +  ++G +A +A+G  V  N++ AGP SG SMNP RS GPA+    ++  WIY V
Sbjct:   45 SISVPFLQKLMAEVLGTYFLIFAGC-AAVAVNTQHDKAVTLPG----IAIVWGLTVMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFVIEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYSCYRGLWIYIV 252          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.110e-17
Identity = 60/198 (30.30%), Postives = 90/198 (45.45%), Query Frame = 3
Query:  135 LAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            +AE I T   +F+G G  +  N +       P     I +  G  + V +    +ISG H NPAVT   A+  +        Y  AQL GS++AS  L+++                           +F L++ +   A D +  + G +A IA+G  +  N+  AGP SG SMNPARS GPA+  G ++  W+Y V
Sbjct:   46 IAEMIGTYFIIFSGCG-VVVVNVLYGGTITFPG----ICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSR--ATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIV 236          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 4.217e-17
Identity = 63/212 (29.72%), Postives = 97/212 (45.75%), Query Frame = 3
Query:   87 FGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIY 722
            FG       L   +  +AE + T + +F+  G  I+  +++        GL+  A+  G ++ V V    +ISG H+NP++T   A+ G         Y  AQ LG+  A+ L+ V   G+                       T  +V+   A    P + +LG +    IG ++   +L  GP SGGSMNPARS GPAV + +F+D WIY
Sbjct:   33 FGCLPYDIDLNPLRIVMAELVGTFILMFSVCG-VISSTQLSGGHV----GLLEYAVTAGLSVVVVVYSIGHISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAAT-LVGVSVYGVNADIMATKPALSCVSAFFVELIATSIVVFLASALHCGPHQ-NLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVVAWDFEDLWIY 237          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 9.394e-17
Identity = 60/198 (30.30%), Postives = 90/198 (45.45%), Query Frame = 3
Query:  135 LAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            +AE I T   VF+G G  +  N +       P     I +  G  + V +    +ISG H NPAVT   A+  +        Y  AQ  GS++AS  L+++                           +F L++ +   A D +  ++G +A IA+G  +  N+  AGP SG SMNPARS GPA+  G ++  W+Y V
Sbjct:   46 IAEMIGTYFIVFSGCG-VVVVNVLYGGTITFPG----ICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFGTTPADSPARALVAEIIISFLLMFVISGVATDNR--AVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGVYKHIWVYIV 236          
The following BLAST results are available for this feature:
BLAST of DY258713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
PIP11_MAIZE2.920e-1832.86Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
AQPB_DICDI2.920e-1833.49Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
NIP32_ORYSJ3.814e-1832.67Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica G... [more]
NIP33_ORYSJ4.981e-1831.28Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica G... [more]
NIP11_ARATH4.981e-1831.63Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1... [more]
AQP6_HUMAN6.505e-1835.27Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
NIP12_ARATH8.496e-1831.63Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2... [more]
NIP42_ARATH1.110e-1730.30Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]
NIP71_ARATH4.217e-1729.72Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]
NIP41_ARATH9.394e-1730.30Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3AF06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258713 ID=DY258713; Name=DY258713; organism=Citrus clementina; type=EST; length=1104bp
CTTATCTTCTTCTTTTTAAGAAAGACTCGAGAGAGTTTTTTTTTCCCTAT
TCTCTAGCTCTTTCTTGATCAACAATGGCTATTGCCTTCGGCCGCTTCGA
TGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTATCTTGCTGAGTTTATCT
CAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCTCGGCCATTGCTTTCAAC
AAGATGACAGCAGATGCAGCACTTGATCCATCAGGGCTAGTAGCCATCGC
TATTTGCCATGGATTTGCTCTATTTGTCGCAGTTGCAATTGGTGCTAACA
TCTCAGGTGGCCACGTCAACCCAGCCGTCACCTTTGGATTGGCTCTTGGT
GGCCAAATCACCATCCTCACTGGCATCTTCTACTGGATTGCCCAACTTCT
TGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGTTGTCACTGGAGGCTTGG
CAGTTCCTACCCACAATGTTGCTGCTGGAGTTGGAGCCATTGAAGGAGTT
GTGATGGAGATCATCATCACATTTGGTTTGGTCTACACGGTCTATGCCAC
GGCAGCTGACCCCAAGAAGGGATCATTGGGCACCATTGCACCCATTGCCA
TCGGTTTCATTGTCGGTGCCAACATCCTGGCCGCCGGCCCATTCTCCGGT
GGTTCCATGAACCCGGCCCGTTCCTTCGGGCCTGCCGTTGCCAGCGGCAA
CTTTCAGGACAACTGGATCTACTGGGTTGGCCCTCTCATTGGCGGCGGCC
TTGCCGGGCTTCTCTATGGCAATGTGTTCATGCACTCTGAACATGCACCC
CTATCTAATGACTAATTAATTAATAAGTAAAACTTTGTTTAAAAGTTAAT
TAAATCATTTTGATCCCCCGGCTTTTGGCTCTTTCTTTTTTGAAAAAAAG
AAAGGAAACCAGCTTTGGGCCTTTTCTCCTTTTCTTCTTTAGTTTCTTGG
GAACCCCTCTTTTTAAAACCATTTGGTTTTGGGAGGGGTGAAAAAAATCC
TTTGGTGGGGGGGGGTCCCATTTGGGGGCTTTTTCTCGAAAGAGAAAGGG
GAGGGGGAAGGGGGAAAAAAATGGTTGTAAAGCACCCCCCCTTTTATTTC
TTTT
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