DY258713

Overview
NameDY258713
Unique NameDY258713
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1104
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 183.726 bits (465), Expect = 1.643e-45
Identity = 97/214 (45.33%), Postives = 126/214 (58.88%), Query Frame = 3
Query:  108 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLG--------TIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYW 725
            FS  + +AY AEF ST LFVF  VGS I+   +T D   D S L+A A+   F LF AV I A++SGGHVNPAVTF  A+GG IT+ + IFYW +Q+LGS  A  +L  ++ G AVPT                   TF +VYTV+  A DP+ G  G         +  + +G + GA +LAAG  +G SMNPARSFGPAV SG++ +  +YW
Sbjct:   12 FSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH-VAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYW 224          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.391e-44
Identity = 92/212 (43.40%), Postives = 132/212 (62.26%), Query Frame = 3
Query:   93 RFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            +F    S+ + + Y++EFIST  FV A VGS ++  K+ A     P G++  AI +  AL  +V I  N+SGGHVNPAVTF +A+ G+I++ T +FYW +Q++ S++A  +LKV      VP +                   F LVYTV+ TA+DP++G    + PI IGF+ GAN+LAAGPFSGGSMNPA +FG A+  G+F++  +YWV
Sbjct:   12 KFQGVLSMNALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQAVYWV 222          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.439e-41
Identity = 97/216 (44.91%), Postives = 126/216 (58.33%), Query Frame = 3
Query:  108 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSG-LVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVY--------ATAADPKKGSLGT-IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYW 725
            FS  S ++YLAEFIST LFVF  VGSAI+   +T       +G LVA A+   F LF AV I A++SGGHVNPAVTF  A+GG+I + + +FYW +QLLG+  A   L + + G  VPT                   TF LVYTV+        +   D K+    T +  +A+G   GA +LAAG  +G SMNPARSFGPAV SG+F++  +YW
Sbjct:   14 FSAPSLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHFKNQAVYW 229          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.714e-40
Identity = 98/253 (38.74%), Postives = 133/253 (52.57%), Query Frame = 3
Query:   75 MAIAFGRFDDSFS------LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADA-ALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFM-HSEHAPLSN 809
            MA    +  DSF       +G  +A LAE + T LFVF GV +A+A         A+  + L A+AI H  A  V V  G ++SGGH+NPAVT GL + G IT L  + Y  AQLL S  A  LL+ ++GG+  P H                  TF L++  YA   DP +  +  I P+  G IVGAN LA G F+G SMNPARSFGPA+A+G++ ++W+YW+              ++F+    H PL N
Sbjct:    1 MAKLMNKLVDSFEHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESLFLVQKMHEPLLN 252          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 4.630e-40
Identity = 93/234 (39.74%), Postives = 129/234 (55.13%), Query Frame = 3
Query:  114 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADA-ALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFM-HSEHAPLSN 809
            +G  +A LAE + T LFVF GV +++A         A+  + L A+AI H  A  V V  G ++SGGH+NPAVT G+ + G IT L  + Y  AQLL S +A  LL+ ++GG+  P H                  TF L++  YA   DP +  + TI P+  G IVGAN LA G F+G SMNPARSFGPA+A+G + ++W+YW+              ++FM +  H PL N
Sbjct:   22 VGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATGVWTNHWVYWIGPLLGGSLAGFVYESLFMVNKTHEPLLN 254          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.119e-39
Identity = 88/202 (43.56%), Postives = 114/202 (56.44%), Query Frame = 3
Query:  123 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            F+  L E + T LFVF GVG+A+  +  T   +     L A+A+     + V    G +ISGGHVNPAVT  LA+GG +T+     Y  AQ+L S  A FLL+ +TGGLA P H                  TF L++ +YAT  DP+K  L    P+  G +VGAN +A    SG SMNPARSFGPAVASG +  +W+YWV
Sbjct:   18 FRGVLGELVLTFLFVFIGVGAAMT-DGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWV 217          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.489e-38
Identity = 89/205 (43.41%), Postives = 115/205 (56.10%), Query Frame = 3
Query:  117 GSFKAYLAEFISTLLFVFAGVGSAIAFN-KMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            G  +A LAE + T +FVF GV + +A      A AA+  + L  +AI    A  V V  G ++SGGH+NPAVT  L   G IT      Y  AQLL S +A  LL+ +TGG+A P H                  TF L++ VYAT  DP + S+    P+  G IVGAN +A G FSG SMNPARSFGPA+A+G +  +WIYW+
Sbjct:   17 GCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDP-RSSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATGVWTHHWIYWL 220          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.647e-37
Identity = 83/216 (38.43%), Postives = 116/216 (53.70%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            +  G   +++  G  +A   E + T LFVF GV S I   K  A  A + + + A A+     + V    G ++SGGH+NPAVT  LA+GG IT+     Y  AQL GS +A  LL+ +TGG A P H                  TF L+  + AT  DP++ +     P+  G +VGAN +A G  +G SMNPARSFGPA+A+G +  +W+YWV
Sbjct:    9 LELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGK-AAGGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEWAHHWVYWV 223          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.034e-31
Identity = 84/207 (40.58%), Postives = 118/207 (57.00%), Query Frame = 3
Query:  123 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            +KA  AEF++TL+FV  GVGS I +        +D   +V I++C G ++   V    +ISGGH+NPAVT  +    +I+I   +FY IAQ LG+I+ + +L +VT     GGL V T                   TF LV+T++A+    +    G+IA +AIGF V    L A  ++G SMNPARSFGPAV  GN+ ++WIYWV
Sbjct:   35 WKAVSAEFLATLIFVLLGVGSTINWGGSENPLPVD---MVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWV 235          
BLAST of DY258713 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.326e-30
Identity = 81/207 (39.13%), Postives = 117/207 (56.52%), Query Frame = 3
Query:  123 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 728
            +KA  AEF++ L+FV   VGS I +        +D   +V I++C G ++   V    +ISGGH+NPAVT  +    +I+I   +FY  AQ LG+I+ + +L +VT     GGL V T +                 TF LV+T++A+    +    G+IA +AIGF V    L A  ++G SMNPARSFGPAV  GN++++WIYWV
Sbjct:   38 WKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVD---MVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGLGVTTVHGNLTAGHGLLVELII--TFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWV 238          
The following BLAST results are available for this feature:
BLAST of DY258713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
TIP51_ORYSJ1.643e-4545.33Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
TIP51_ARATH1.391e-4443.40Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP51_MAIZE1.439e-4144.91Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
TIP41_MAIZE2.714e-4038.74Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
TIP42_MAIZE4.630e-4039.74Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
TIP43_MAIZE5.119e-3943.56Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP41_ORYSJ1.489e-3843.41Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
TIP42_ORYSJ1.647e-3738.43Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
AQP4_MOUSE1.034e-3140.58Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_NOTAL3.326e-3039.13Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3AF06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258713 ID=DY258713; Name=DY258713; organism=Citrus clementina; type=EST; length=1104bp
CTTATCTTCTTCTTTTTAAGAAAGACTCGAGAGAGTTTTTTTTTCCCTAT
TCTCTAGCTCTTTCTTGATCAACAATGGCTATTGCCTTCGGCCGCTTCGA
TGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTATCTTGCTGAGTTTATCT
CAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCTCGGCCATTGCTTTCAAC
AAGATGACAGCAGATGCAGCACTTGATCCATCAGGGCTAGTAGCCATCGC
TATTTGCCATGGATTTGCTCTATTTGTCGCAGTTGCAATTGGTGCTAACA
TCTCAGGTGGCCACGTCAACCCAGCCGTCACCTTTGGATTGGCTCTTGGT
GGCCAAATCACCATCCTCACTGGCATCTTCTACTGGATTGCCCAACTTCT
TGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGTTGTCACTGGAGGCTTGG
CAGTTCCTACCCACAATGTTGCTGCTGGAGTTGGAGCCATTGAAGGAGTT
GTGATGGAGATCATCATCACATTTGGTTTGGTCTACACGGTCTATGCCAC
GGCAGCTGACCCCAAGAAGGGATCATTGGGCACCATTGCACCCATTGCCA
TCGGTTTCATTGTCGGTGCCAACATCCTGGCCGCCGGCCCATTCTCCGGT
GGTTCCATGAACCCGGCCCGTTCCTTCGGGCCTGCCGTTGCCAGCGGCAA
CTTTCAGGACAACTGGATCTACTGGGTTGGCCCTCTCATTGGCGGCGGCC
TTGCCGGGCTTCTCTATGGCAATGTGTTCATGCACTCTGAACATGCACCC
CTATCTAATGACTAATTAATTAATAAGTAAAACTTTGTTTAAAAGTTAAT
TAAATCATTTTGATCCCCCGGCTTTTGGCTCTTTCTTTTTTGAAAAAAAG
AAAGGAAACCAGCTTTGGGCCTTTTCTCCTTTTCTTCTTTAGTTTCTTGG
GAACCCCTCTTTTTAAAACCATTTGGTTTTGGGAGGGGTGAAAAAAATCC
TTTGGTGGGGGGGGGTCCCATTTGGGGGCTTTTTCTCGAAAGAGAAAGGG
GAGGGGGAAGGGGGAAAAAAATGGTTGTAAAGCACCCCCCCTTTTATTTC
TTTT
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