DY258714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A1D_HUMAN (Histone H2A type 1-D OS=Homo sapiens GN=HIST1H2AD PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.010e-27 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTTK 454 K K + + +RSSRAG+QFPVGR+HR L+ + RVGA A VYLA++LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ K T+ Sbjct: 6 KQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A_URECA (Histone H2A OS=Urechis caupo PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.320e-27 Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 116 KDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 445 K K + SRSSRAG+QFPVGRIHR L+ A R+GA A VYLA+++EYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K Sbjct: 9 KAKGKSKSRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.320e-27 Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 2 Query: 122 KKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTKD 457 KK+P+SRS +AG+QFPVGRI R+LK A RVG A VYLA++LEYL AEVLELAGNA++D K RI PRH+ LAIR DEEL L+ G TIA GGV+P+I+ L+ K T + Sbjct: 22 KKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAE 133
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.320e-27 Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 2 Query: 122 KKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTKD 457 KK+P+SRS +AG+QFPVGRI R+LK A RVG A VYLA++LEYL AEVLELAGNA++D K RI PRH+ LAIR DEEL L+ G TIA GGV+P+I+ L+ K T + Sbjct: 22 KKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAE 133
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana GN=At5g02560 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.320e-27 Identity = 67/112 (59.82%), Postives = 87/112 (77.68%), Query Frame = 2 Query: 122 KKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 454 KK+P+SRS ++G+QFPVGRI R+LK + RVG A VYLA++LEYL AEVLELAGNA++D K RI PRH+ LA+R DEEL TL+KG TIA GGV+P+I+ L+ K ++ Sbjct: 21 KKKPVSRSVKSGLQFPVGRIGRYLKKGRYSK-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSE 131
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.724e-27 Identity = 68/108 (62.96%), Postives = 83/108 (76.85%), Query Frame = 2 Query: 125 KRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 445 K+ SRSS+ G+QFPVGRI R LK+ A RVGA A VYLA++LEYL AEVLELAGNA++D K RI PRH+QLA+R DEEL L+ G TIA GGV+P+IH+ L+ K Sbjct: 14 KKATSRSSKGGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPK 120
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 1.724e-27 Identity = 69/108 (63.89%), Postives = 83/108 (76.85%), Query Frame = 2 Query: 125 KRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINK 445 K+ ISRSS+AG+QFPVGRI R LK+ A RVGA A VYLA++LEYL AEVLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K Sbjct: 14 KKAISRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGMVTIASGGVMPNIHNLLLPK 120
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A_STRPU (Histone H2A, embryonic OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 2.251e-27 Identity = 67/113 (59.29%), Postives = 85/113 (75.22%), Query Frame = 2 Query: 116 KDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTT 451 K + + +RSSRAG+QFPVGR+HR L+ A RVG A VY+A++LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA GGV+P+I L+ K T Sbjct: 9 KARTKAKTRSSRAGLQFPVGRVHRFLRKGNYAK-RVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A_NEUCR (Histone H2A OS=Neurospora crassa GN=hh2a PE=3 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 2.251e-27 Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 110 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTT 451 K K SRSS+AG+ FPVGR+HR L+ A RVGA A VYLA++LEYL AE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ TIA GGV+P+IH++L+ K T Sbjct: 10 KASGSKNAQSRSSKAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKT 123
BLAST of DY258714 vs. ExPASy Swiss-Prot
Match: H2A_NEOFI (Histone H2A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hta1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.251e-27 Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 110 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTT 451 K K SRSS+AG+ FPVGR+HR L+ A RVGA A VYLA++LEYL AE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ TIA GGV+P+IH++L+ K T Sbjct: 9 KASGSKNAQSRSSKAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKT 122 The following BLAST results are available for this feature:
BLAST of DY258714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258714 ID=DY258714; Name=DY258714; organism=Citrus clementina; type=EST; length=1195bpback to top |