DY258723

Overview
NameDY258723
Unique NameDY258723
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1138
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: GPX4_BOVIN (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Bos taurus GN=GPX4 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.543e-38
Identity = 77/156 (49.36%), Postives = 108/156 (69.23%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDI 743
            +S+++F+ KDIDG+ V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN EIKEFA   +  +F +F K+ VNG +  P+++++K      G LG+ +KWNF KFL+DKNG V++RY P   P  IEKD+
Sbjct:   39 RSMHEFSAKDIDGRMVNLDKYRGHVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNAEIKEFA-AGYNVKFDLFSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: BSAA_STAAW (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MW2) GN=bsaA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.543e-38
Identity = 75/158 (47.47%), Postives = 103/158 (65.19%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 755
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E  +     +   FP+  K+DV G +  P++++L ++  GF  + +KWNF KFLVD+ G V++R+ P   P QIE++I+KL+
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: BSAA_STAAS (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MSSA476) GN=bsaA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.543e-38
Identity = 75/158 (47.47%), Postives = 103/158 (65.19%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 755
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E  +     +   FP+  K+DV G +  P++++L ++  GF  + +KWNF KFLVD+ G V++R+ P   P QIE++I+KL+
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: BSAA_STAAR (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MRSA252) GN=bsaA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.543e-38
Identity = 75/158 (47.47%), Postives = 103/158 (65.19%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 755
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E  +     +   FP+  K+DV G +  P++++L ++  GF  + +KWNF KFLVD+ G V++R+ P   P QIE++I+KL+
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: BSAA_STAAN (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain N315) GN=bsaA PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.543e-38
Identity = 75/158 (47.47%), Postives = 103/158 (65.19%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 755
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E  +     +   FP+  K+DV G +  P++++L ++  GF  + +KWNF KFLVD+ G V++R+ P   P QIE++I+KL+
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: BSAA_STAAM (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=bsaA PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.543e-38
Identity = 75/158 (47.47%), Postives = 103/158 (65.19%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 755
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E  +     +   FP+  K+DV G +  P++++L ++  GF  + +KWNF KFLVD+ G V++R+ P   P QIE++I+KL+
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: BSAA_STAAC (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain COL) GN=bsaA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.543e-38
Identity = 75/158 (47.47%), Postives = 103/158 (65.19%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 755
            +++YDF V+   G    L  +KG V+LIVN AS CG T S +  L  LYEKYK QGF IL FPCNQFGGQEPGS  E  +     +   FP+  K+DV G +  P++++L ++  GF  + +KWNF KFLVD+ G V++R+ P   P QIE++I+KL+
Sbjct:    2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: GPX4_PONPY (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Pongo pygmaeus GN=GPX4 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 7.656e-38
Identity = 77/156 (49.36%), Postives = 107/156 (68.59%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDI 743
            +S+++F+ KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN EIKEFA   +  +F +F K+ VNG +  P+++++K      G LG+ +KWNF KFL+DKNG V++RY P   P  IEKD+
Sbjct:   39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: GPX4_HUMAN (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Homo sapiens GN=GPX4 PE=1 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 7.656e-38
Identity = 77/156 (49.36%), Postives = 107/156 (68.59%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDI 743
            +S+++F+ KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN EIKEFA   +  +F +F K+ VNG +  P+++++K      G LG+ +KWNF KFL+DKNG V++RY P   P  IEKD+
Sbjct:   39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193
[Close]
BLAST of DY258723 vs. ExPASy Swiss-Prot
Match: GPX4_CALJA (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Callithrix jacchus GN=GPX4 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 1.306e-37
Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 3 
Query:  282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDI 743
            +S+++F+ KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN EIKEFA   +  +F +F K+ VNG +  P+++++K      G LG+ +KWNF KFLVDKNG V++RY P   P  IEKD+
Sbjct:   39 RSMHEFSAKDIDGHTVNLDKYRGFVCIVTNVASQUGKTQVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGTLGNAIKWNFTKFLVDKNGCVVKRYGPMEEPQVIEKDL 193
The following BLAST results are available for this feature:
BLAST of DY258723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
GPX4_BOVIN1.543e-3849.36Phospholipid hydroperoxide glutathione peroxidase,... [more]
BSAA_STAAW1.543e-3847.47Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAS1.543e-3847.47Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAR1.543e-3847.47Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAN1.543e-3847.47Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAM1.543e-3847.47Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAC1.543e-3847.47Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
GPX4_PONPY7.656e-3849.36Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX4_HUMAN7.656e-3849.36Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX4_CALJA1.306e-3750.00Phospholipid hydroperoxide glutathione peroxidase,... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3AG11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258723 ID=DY258723; Name=DY258723; organism=Citrus clementina; type=EST; length=1138bp
GATTGATTCACTTAAATTCCATCTCAATGGCTTCTTATTCGATGCCTTTC
TCTGCAGCTTTCTCCTCACCTTTACGGCATTTCACACAAAACAAAACATG
CCCTGCTGCATGGGCTTCATCAATGGCGGCTTCATGGACTCCTACTAATT
CAATCAAATCATCAATTGGGTCCGCTAAACCAGGCTTTCTTCAACATGGG
CTGTTTTCCCAATCTTCAAATTTGCCTGGGTTTTTCGTGAAACGTCGTTC
CTTTGGTGTTCACGCTACAGCTGCTACTGAGAAGTCTTTATATGACTTCA
CCGTCAAGGATATTGATGGTAAAGATGTTCCTCTTAGCAAGTTTAAGGGC
AAAGTTCTGTTGATTGTGAATGTCGCTTCAAGATGTGGCTTGACACCATC
TAATTACTCGGAGCTCTCTCACTTATATGAGAAGTACAAGACTCAAGGAT
TTGAGATTCTAGCTTTCCCTTGCAATCAATTTGGTGGGCAAGAGCCTGGA
TCAAACCCTGAGATCAAGGAATTCGCTTGTACTAGGTTTAAGGCAGAATT
TCCCATATTTGACAAGGTTGATGTAAATGGACCAAACACAGCTCCAGTTT
ACCAGTTTTTGAAGTCAAGTGCTGGGGGATTTTTAGGCGACCTTGTCAAG
TGGAACTTTGAGAAGTTCTTAGTGGACAAAAATGGTAAAGTCATCGAGAG
ATATCCACCAACTACCTCGCCTTTCCAAATTGAGAAGGACATCCAGAAGC
TTGTTGTGGCATGAATCTTGACTTGAGCTGCTTGGCCATGTCTCAGATGT
ATCGACGAGATAGAAAACGAATATATGTATATGTATATTTCTGAATCGGG
CATCACATAAATGAATTTTTCCCTGCCTCCCCTGAAATGTTGTAAGTTTT
TTAATTTCCAAAATATTTAAAAAATTGGTAATAATTTCCTTTGCCAATAA
AAAAAAAAAAAAAAAAAAAACCCCAACTTTCTTTGAAAAAATTTGGAATT
AAAAAAAAAAGCATTTGCTTAACAATTTTGGTTGCAAAAAAACAGGGGTC
CCTTACCCAGTCAAAAAAAAAAATACTTTATTTTGCCCCCCCCCCCCAAA
AAACCCCCCCAAAAAAAGGGAAATCCTAAATTAAAAAG
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