DY258770

Overview
NameDY258770
Unique NameDY258770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1247
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.164e-20
Identity = 53/152 (34.87%), Postives = 85/152 (55.92%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYI-----EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 441
            +K +N+LLD++    + DFGLA+      TH++T + GT+G++APEY+  G+ +EK DV+ +GV++LE+  G R          +   LL  V            +D  ++  ++     E E  ++++V LLCTQ SP  RP M EV+RML
Sbjct:  441 IKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFV----PETGHLLQRVWNLYTLNRLVEALDPCLKDEFLQVQGSEAEACKVLRVGLLCTQASPSLRPSMEEVIRML 588          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.066e-19
Identity = 55/149 (36.91%), Postives = 88/149 (59.06%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKL-MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 444
            VK+ANILLD+ F A V DFGL+K   D   THV+TAV+G+ G++ PEYL+  + +EK+DV+ +GV++LE++ G+   D +     + V L++W             +D  + G    EEV++  +V   C   + +ERP M +++  LE
Sbjct:  613 VKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPS--LPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLLWNLE 759          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.066e-19
Identity = 56/166 (33.73%), Postives = 89/166 (53.61%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG---DGLAERWEEWQKEE 489
            +K ANILLDE   A V DFG +KL+      +TT V+GT+G++ PEY +TG  +EK+DV+ +GV+L+EL++GQ+A    R        L+ +             +D  +      +E+++  ++A  CT+    ERP+M EV   LE    +    +W +   EE
Sbjct:  541 IKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFER--PQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLEALRVEKTKHKWSDQYPEE 704          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.066e-19
Identity = 60/149 (40.27%), Postives = 86/149 (57.72%), Query Frame = 1
Query:    4 KAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXV-DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 444
            K +NILLD E+ A + DFGLAK     D +HV+T + GT G+ APEYL+TG  + K+DV+ YGV+LLE+++G+RA D  R   +    L++W             V D+ ++  Y  EE  ++  +AL C       RP M+EVV  LE
Sbjct:  206 KTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQ--KLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLE 352          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.393e-19
Identity = 55/161 (34.16%), Postives = 88/161 (54.66%), Query Frame = 1
Query:   16 ILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVV----RMLEGDGLAERWEEW 477
            ILLD++F+A + D+GLAKL+   D  D+       G +G++APEY ST  +S K DV+G+G++LLEL+TGQ+   +          L+DWV            +D  +     +EE+ Q +++A  C    P ERP M +V      M +  G++E ++E+
Sbjct:  432 ILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAIDRSICDKGHDEEILQFLKIACSCVVSRPKERPTMIQVYESLKNMADKHGVSEHYDEF 592          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.393e-19
Identity = 57/150 (38.00%), Postives = 81/150 (54.00%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 441
            +KA+NILLD+E    + DFGLAKL D   T     T+ + GT G++APEY   G+ S KTDVF +GV+++E+ITG+   +     +++   LL WV            +D  +       E+ + I + LLC Q SP  RP M  V  ML
Sbjct:  487 LKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTTG-SRSEILRCIHIGLLCVQESPASRPTMDSVALML 635          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.819e-19
Identity = 54/145 (37.24%), Postives = 82/145 (56.55%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVV 432
            VK  NILL+E F+  + DFGL++    + +THV+T V GTIG++ PEY  T   +EK+DV+ +GV+LL +IT Q   D     N +   + +WV             D ++ G+Y    V + +++A+ C   S M RP MS+VV
Sbjct:  703 VKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVID----QNREKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVV 843          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.819e-19
Identity = 54/149 (36.24%), Postives = 89/149 (59.73%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 444
            VK+ NILLDE F+A + DFGL++     +++HV+T V GT G++ PEY  T + +EK+DV+ +G++LLE+IT Q   + A    +++  + + V            VD ++ G Y    V + +++A+ C   SP+ RP MS VV+ L+
Sbjct:  699 VKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQA----NENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMSHVVQELK 843          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.819e-19
Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXV-DSDMEG--NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQK 483
            VK  NILLD ++EA++ DFGLAKLM     +    + V G+ G+IAPEY  T   +EK+DV+ YGV+LLE+++G+ A +       D + +++WV            V D  ++G  + I +E+ Q + +A+ C   SP+ERP M EVV +L     +   EEW K
Sbjct:  901 VKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVE---PQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLLMEVKCSP--EEWGK 1061          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.819e-19
Identity = 62/193 (32.12%), Postives = 102/193 (52.85%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTWIVDSTSHIQPDELS 579
            VK  NILLDE++ A V DFG ++ ++   TH+TT V GT G++ PEY  T + ++K+DV+ +GV+L+ELITG++ F + R   +++  L+               VDS ++     E+V  + ++A  C      +RP M EV   LE    +    E   EE   ++     + +++W VD T+     +LS
Sbjct:  547 VKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMR--PEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELERIRSSPEDLELHIEEEDEEECAMEINMDDSWSVDMTAPASLFDLS 737          
The following BLAST results are available for this feature:
BLAST of DY258770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
CRK42_ARATH8.164e-2034.87Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y2393_ARATH1.066e-1936.91Probable receptor-like protein kinase At2g39360 OS... [more]
WAK3_ARATH1.066e-1933.73Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
APK1B_ARATH1.066e-1940.27Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y1719_ARATH1.393e-1934.16Probable inactive receptor kinase At1g27190 OS=Ara... [more]
CRK28_ARATH1.393e-1938.00Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y5181_ARATH1.819e-1937.24Probable LRR receptor-like serine/threonine-protei... [more]
Y5169_ARATH1.819e-1936.24Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH1.819e-1937.95Probable LRR receptor-like serine/threonine-protei... [more]
WAKLI_ARATH1.819e-1932.12Wall-associated receptor kinase-like 22 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BE09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258770 ID=DY258770; Name=DY258770; organism=Citrus clementina; type=EST; length=1247bp
GTGAAAGCCGCTAATATATTGTTGGATGAGGAATTTGAAGCTGTTGTTGG
AGATTTCGGGTTGGCTAAACTCATGGATTACAAAGACACACACGTTACAA
CCGCTGTACGTGGAACAATCGGACATATAGCTCCAGAGTACCTCTCTACT
GGAAAGTCGTCAGAGAAGACTGATGTTTTTGGGTATGGAGTCATGCTTCT
TGAACTCATCACGGGGCAGAGAGCTTTTGATCTTGCTCGGCTTGCTAATG
ACGACGACGTTATGCTGCTTGATTGGGTAAAAGGACTTCTGAAAGAGAAG
AAGTTGGAACAGTTGGTTGATAGCGACATGGAGGGCAACTACATTGAGGA
AGAAGTGGAGCAGCTGATCCAGGTTGCTCTTCTGTGCACACAAGGGTCCC
CAATGGAGCGACCGAAGATGTCAGAGGTGGTAAGAATGCTGGAAGGCGAT
GGATTGGCTGAAAGATGGGAGGAATGGCAGAAAGAAGAGATGTTCCGGCA
AGATTTTAACCATACACCACACCCCAATAATACTTGGATTGTCGACTCAA
CTTCTCACATCCAGCCAGATGAATTGTCTGGTCCTAGATGATATGGAAGT
CTTCTTGATGTGCTTTTTGTATGTGAAAGTGATATTTATAACATTTGTGC
ATATAGGTTCCTTCTTCTTTTTCCCATTTTAATGTCCAGTTTATATTACA
AATTGTACTTGTTTAGGCAATGTTGTAATTTTCTATAGGGTTGCCAAAGT
CTATCGAGGAACTTTAAGTGCTAGCAAACAAGCGGGCATCCTTGTCATGT
CATCTGTGTATTCCAATTTTAGCTAAAATGGTATGAAAATAAGGAGTATA
TGTTTTCTTAACACAACCTTTAAACTTTCTATTTTTTTTTTTAGTTTCCT
GCCGGTGATTTTATCAAAAAAGATAAAAATTTTGGGGGTCAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAACCCCACTTTCCTTGTAAAAAGTTGGCCA
TTAAAAAAAAAGCATTTGCTTATTAATTTTGTGGGCACCGGAACAGGGGC
TCCTTCACCGTCCAAAAAAAAAATCAATTATTTTTTCCCCCCCCCCCCCG
TAAATCCCCCCCTAAAGGGGAAGTCCCTATAATAACAGGGGGCCCCAAAA
GGCTGTTTTTTCTCCTCGGCGGCCCACCCCCCCCCGTCCCCCCCCCGTTC
CCTCCTCCTAACAAAAACTTTCCCTTCTTGAGTAGAGTATTTTATAC
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