DY258770

Overview
NameDY258770
Unique NameDY258770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1247
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.292e-19
Identity = 54/153 (35.29%), Postives = 89/153 (58.17%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDY--KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 453
            +K+ NIL+D ++ A V DFG+AK +D   K     + + G+ G+IAPEY  T + +EK+D++ +GV++LE++T +R  D   L   D   L+ WV            +D  ++  + +EE+ +++ V LLCT   P+ RP M  VV+ML+  G
Sbjct:  816 IKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVD-PELGEKD---LVKWVCSTLDQKGIEHVIDPKLDSCF-KEEISKILNVGLLCTSPLPINRPSMRRVVKMLQEIG 963          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.292e-19
Identity = 51/154 (33.12%), Postives = 90/154 (58.44%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM-LLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 456
            +KA+NILLD +    + DFG+A+   D++    T  V GT G++ PEY++ G+ S K+DV+ +GV++LE+++G++     ++  D  V  L+ +V            VD  + G+Y ++EV + I + LLC Q +P+ RP +S + +ML    +
Sbjct:  475 IKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQM--DGSVCNLVTYVWRLWNTDSSLELVDPAISGSYEKDEVTRCIHIGLLCVQENPVNRPALSTIFQMLTNSSI 626          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.911e-19
Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEM 492
            VK  NILLDE F+A + DFGL++      +THV+TAV GT G++ PEY  T + +EK+DV+ +G++LLE+IT +      R    +   +  WV            VD  +  +Y    V + +++A+ C   S  +RP MS+V   L+     E  +   +E+M
Sbjct:  699 VKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTR----EKPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELKQCLTLENSKRGVREDM 859          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.911e-19
Identity = 54/148 (36.49%), Postives = 83/148 (56.08%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 444
            +K++NILL + F A + DFGLA+L+   DTHVTT + GT+G+I PEY     ++ K DV+ +GV+LLEL+TG+R  D+ +     D  L+ WV             D  +      EE+  ++++A  C   +P  RP   ++V  LE
Sbjct:  870 IKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRD--LISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLE 1015          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.911e-19
Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLA 459
            +KA NILL ++  A + DFG+A++     T   T  + GT G+++PEY   G+ S K+DV+ +GV++LE+I+G++  ++ ++       L+ +             VD     NY   EV + I +ALLC Q    +RP MS +V+ML    +A
Sbjct:  477 LKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLTTSSIA 630          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 6.911e-19
Identity = 63/195 (32.31%), Postives = 101/195 (51.79%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV-MLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTWIVDSTSHIQPDELS 579
            +KA NILLD++    + DFG+A++     T  +T  V GT G+++PEY   G+ S K+DV+ +GV++LE+I+G +   L ++  D+ V  L+ +             VD     NY   E+ + I +ALLC Q    +RP MS +V+ML    +A    E +    F +       P+    +DS++H   DE S
Sbjct:  452 LKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQM--DESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIA--LAEPRPPGFFFRSKQEQAGPS----IDSSTHCSVDEAS 638          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.027e-19
Identity = 56/151 (37.09%), Postives = 92/151 (60.93%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL-DWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 444
            VK+ NILLDE +EA + D+GL K +   D+  +T      +G+IAPE      ++SEK DV+ YGV+LLEL+TG++  +     +++ V++L D+V             D  +   + E E+ Q++++ LLCT  +P++RP M+EVV++LE
Sbjct:  728 VKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESP---SENQVLILRDYVRDLLETGSASDCFDRRLR-EFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLE 874          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.027e-19
Identity = 54/155 (34.84%), Postives = 83/155 (53.55%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLA 459
            +KA+NILLDEE    + DFG+A+L D   T    T  + GT G++APEY+  G+ S KTDV+ +GV++LE+I+G++    +   +  D++   W                    +Y    + + I + LLC Q    ERP M+ VV ML+G  +A
Sbjct:  470 LKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVDKILMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVVLMLDGHTIA 624          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.027e-19
Identity = 54/148 (36.49%), Postives = 83/148 (56.08%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 441
            +KA+NILLD +    + DFG+A++     T   T  + GT G+++PEY   GK S K+DV+ +GV++LELITG++  + +    D    L+ +V            VD  M GN+   EV + I +ALLC Q    ERP M +++ M+
Sbjct:  473 LKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKK--NSSFYEEDGLGDLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMM 618          
BLAST of DY258770 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.179e-18
Identity = 53/150 (35.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:    1 VKAANILLDEEFEAVVGDFGLAKL--MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 444
            +K  NILLDE F A V DFGL+++       THV+T V+GT G++ PEY      +EK+DV+ +GV+LLE++  +      +    +   L+ WV            +DSD+  +     +E+  ++A+ C Q   MERP M++VV  LE
Sbjct:  654 IKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPI--RMQSVPPEQADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMNDVVWALE 801          
The following BLAST results are available for this feature:
BLAST of DY258770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
HSL1_ARATH5.292e-1935.29Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
CRK30_ARATH5.292e-1933.12Putative cysteine-rich receptor-like protein kinas... [more]
Y2289_ARATH6.911e-1933.94Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA6.911e-1936.49Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
CRK4_ARATH6.911e-1933.12Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK19_ARATH6.911e-1932.31Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y1124_ARATH9.027e-1937.09Probable LRR receptor-like serine/threonine-protei... [more]
CRK26_ARATH9.027e-1934.84Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK25_ARATH9.027e-1936.49Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
Y5389_ARATH1.179e-1835.33Probable receptor-like protein kinase At5g38990 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3BE09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258770 ID=DY258770; Name=DY258770; organism=Citrus clementina; type=EST; length=1247bp
GTGAAAGCCGCTAATATATTGTTGGATGAGGAATTTGAAGCTGTTGTTGG
AGATTTCGGGTTGGCTAAACTCATGGATTACAAAGACACACACGTTACAA
CCGCTGTACGTGGAACAATCGGACATATAGCTCCAGAGTACCTCTCTACT
GGAAAGTCGTCAGAGAAGACTGATGTTTTTGGGTATGGAGTCATGCTTCT
TGAACTCATCACGGGGCAGAGAGCTTTTGATCTTGCTCGGCTTGCTAATG
ACGACGACGTTATGCTGCTTGATTGGGTAAAAGGACTTCTGAAAGAGAAG
AAGTTGGAACAGTTGGTTGATAGCGACATGGAGGGCAACTACATTGAGGA
AGAAGTGGAGCAGCTGATCCAGGTTGCTCTTCTGTGCACACAAGGGTCCC
CAATGGAGCGACCGAAGATGTCAGAGGTGGTAAGAATGCTGGAAGGCGAT
GGATTGGCTGAAAGATGGGAGGAATGGCAGAAAGAAGAGATGTTCCGGCA
AGATTTTAACCATACACCACACCCCAATAATACTTGGATTGTCGACTCAA
CTTCTCACATCCAGCCAGATGAATTGTCTGGTCCTAGATGATATGGAAGT
CTTCTTGATGTGCTTTTTGTATGTGAAAGTGATATTTATAACATTTGTGC
ATATAGGTTCCTTCTTCTTTTTCCCATTTTAATGTCCAGTTTATATTACA
AATTGTACTTGTTTAGGCAATGTTGTAATTTTCTATAGGGTTGCCAAAGT
CTATCGAGGAACTTTAAGTGCTAGCAAACAAGCGGGCATCCTTGTCATGT
CATCTGTGTATTCCAATTTTAGCTAAAATGGTATGAAAATAAGGAGTATA
TGTTTTCTTAACACAACCTTTAAACTTTCTATTTTTTTTTTTAGTTTCCT
GCCGGTGATTTTATCAAAAAAGATAAAAATTTTGGGGGTCAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAACCCCACTTTCCTTGTAAAAAGTTGGCCA
TTAAAAAAAAAGCATTTGCTTATTAATTTTGTGGGCACCGGAACAGGGGC
TCCTTCACCGTCCAAAAAAAAAATCAATTATTTTTTCCCCCCCCCCCCCG
TAAATCCCCCCCTAAAGGGGAAGTCCCTATAATAACAGGGGGCCCCAAAA
GGCTGTTTTTTCTCCTCGGCGGCCCACCCCCCCCCGTCCCCCCCCCGTTC
CCTCCTCCTAACAAAAACTTTCCCTTCTTGAGTAGAGTATTTTATAC
back to top