DY258772

Overview
NameDY258772
Unique NameDY258772
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1200
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATM_SCHPO (Aspartate aminotransferase, mitochondrial OS=Schizosaccharomyces pombe GN=aat1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.043e-56
Identity = 107/242 (44.21%), Postives = 154/242 (63.64%), Query Frame = 1
Query:  115 NSTAGFIKTKSFGRVSMVAAVNVSRFE---GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            N+ A      S+  V  +A+ +   F+    V M PPDPI G++EA+K D D KK+NLG G YR +  +PYVL  V++AE  +L +  +KEY PI G+ +F     +L +G     +K+ R+ + Q +SGTG+L +AA  +  ++P   + +S PTWGNHKN+F+ A +    Y+YYDP T GLD +GM++D+ +AP GS ILLH CAHNPTG+DPT  QW+ I   +Q+KNH    D+AYQ
Sbjct:   12 NTFASLKTNVSYHGVKCLASQSKRGFKVWADVPMGPPDPIFGITEAYKKDGDVKKMNLGAGTYRDDAGKPYVLPSVRQAETELLSQKLDKEYAPITGIPSFRVQATKLAYGDVYESIKD-RLVSAQSISGTGALCIAANFLASFYPSKTIYVSDPTWGNHKNVFSRAGLTVKSYKYYDPATRGLDIKGMLSDLTSAPDGSIILLHACAHNPTGVDPTKAQWDDILKTMQKKNHFALLDMAYQ 252          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 6.763e-56
Identity = 109/216 (50.46%), Postives = 143/216 (66.20%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S    V  AP DP+L V  A + D    KLNL  G YRTEE +P VLDVV++AE   L    +KEYLP+ GL  FNK++ +L+ G D+  LKE RV T Q LSGTGSLR+ A  +  +   + + + +PTWGNH  IF  A +    +RYYDPK+ GLDF+GM+ D+ AAP G+ ++L  CAHNPTG+DPT EQWEKI  +++ K+ +PFFD AYQ
Sbjct:    3 SILSSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQ-QLANDLDKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHNKESVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVVLQACAHNPTGVDPTFEQWEKIRRLVRSKSLLPFFDSAYQ 217          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AAT_HAEIN (Aspartate aminotransferase OS=Haemophilus influenzae GN=aspC PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 5.725e-55
Identity = 101/214 (47.20%), Postives = 140/214 (65.42%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            FE +  AP DPILG+ EAFK++T E K+NLG+G Y+  +    ++  VK+AE  + ++ + K YL I+G+A +N+ T  LLFG D+ V++  R  TVQ L GTG+LR+AA  I+R      V IS+PTW NH  IFN   +   EYRYYD +   LD+E ++ D+  A  G  +LLHGC HNPTGIDPTPEQW+++A +  +   +P FD AYQ
Sbjct:    2 FEHIKAAPADPILGLGEAFKSETRENKINLGIGVYKDAQGTTPIMHAVKEAEKRLFDKEKTKNYLTIDGIADYNEQTKALLFGKDSEVIQSNRARTVQSLGGTGALRIAAEFIKRQTKAQNVWISTPTWPNHNAIFNAVGMTIREYRYYDAERKALDWEHLLEDLSQASEGDVVLLHGCCHNPTGIDPTPEQWQELAALSAKNGWLPLFDFAYQ 215          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AAT_SALTI (Aspartate aminotransferase OS=Salmonella typhi GN=aspC PE=3 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 1.559e-52
Identity = 99/214 (46.26%), Postives = 138/214 (64.49%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE    K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +  P  +V +S+P+W NHK++FN A +   EY YYD +   LDFE + A +  A  G  +L HGC HNPTGIDPT EQW+ +A++  EK  +P FD AYQ
Sbjct:    2 FENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPGGTGALRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHSLDFEALQASLSEAQAGDVVLFHGCCHNPTGIDPTLEQWQVLAELSVEKGWLPLFDFAYQ 215          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AAT_SALTY (Aspartate aminotransferase OS=Salmonella typhimurium GN=aspC PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.660e-52
Identity = 99/214 (46.26%), Postives = 138/214 (64.49%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE    K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +  P  +V +S+P+W NHK++FN A +   EY YYD +   LDFE + A +  A  G  +L HGC HNPTGIDPT EQW+ +A++  EK  +P FD AYQ
Sbjct:    2 FENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPGGTGALRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHTLDFEALQASLSEAQAGDVVLFHGCCHNPTGIDPTLEQWQVLAELSVEKGWLPLFDFAYQ 215          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AAT_PSEAE (Aspartate aminotransferase OS=Pseudomonas aeruginosa GN=aspC PE=3 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 3.473e-52
Identity = 98/217 (45.16%), Postives = 140/217 (64.52%), Query Frame = 1
Query:  181 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            +S F  V MAP DPILG++EAF ADT   K+NLGVG Y  EE +  +L  V+ AE   +E    + YLPIEG+AA+++   +LLFG ++ +L   RV T Q + GTG+L+L A  ++R  P A V IS P+W NH+ +F  A  P   YRYYD  + G++  G++ D+ A P  S ++LH C HNPTG+D   + W+++ DV++ K H+PF D+AYQ
Sbjct:    1 MSLFSAVEMAPRDPILGLNEAFNADTRPGKINLGVGVYYNEEGRIPLLRAVQAAEKARIEAHAPRGYLPIEGIAAYDQGVQKLLFGNESELLAAGRVVTTQAVGGTGALKLGADFLKRLLPDATVAISDPSWENHRALFEAAGFPVQNYRYYDAASNGVNRAGLLEDLNALPARSIVVLHACCHNPTGVDLELDDWKQVLDVLKAKGHVPFLDIAYQ 217          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AAT_ECOLI (Aspartate aminotransferase OS=Escherichia coli (strain K12) GN=aspC PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 2.251e-51
Identity = 97/214 (45.33%), Postives = 136/214 (63.55%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE    K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     +V +S+P+W NHK++FN A +   EY YYD +   LDF+ +I  +  A  G  +L HGC HNPTGIDPT EQW+ +A +  EK  +P FD AYQ
Sbjct:    2 FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQ 215          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_CHICK (Aspartate aminotransferase, cytoplasmic OS=Gallus gallus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 5.546e-50
Identity = 102/223 (45.74%), Postives = 141/223 (63.23%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-----AKVLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  APP  +  ++  F+ D D +K+NLGVGAYRT+E QP+VL VV+K E L+   G  N EYLPI GL  F    + +  G D+  + ++RV +VQGL GTG+LR+ A  + R++ G       V +SSPTW NH ++F DA       YRY+D    GLD +G++ D++ AP  S  +LH CAHNPTG DPTP++W++IA V++ +   PFFD AYQ
Sbjct:    4 SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGDGSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLDDMEKAPEFSIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLFPFFDSAYQ 226          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_PANTR (Aspartate aminotransferase, cytoplasmic OS=Pan troglodytes GN=GOT1 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.235e-49
Identity = 104/223 (46.64%), Postives = 139/223 (62.33%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++  P+VL VVKK E  +  +   N EYLPI GLA F    + L  G D+  LKE+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLD +G + D++ AP  S ++LH CAHNPTGIDPTPEQW++IA V++ +   PFFD AYQ
Sbjct:    5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQ 227          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_HUMAN (Aspartate aminotransferase, cytoplasmic OS=Homo sapiens GN=GOT1 PE=1 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 1.235e-49
Identity = 104/223 (46.64%), Postives = 139/223 (62.33%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++  P+VL VVKK E  +  +   N EYLPI GLA F    + L  G D+  LKE+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLD +G + D++ AP  S ++LH CAHNPTGIDPTPEQW++IA V++ +   PFFD AYQ
Sbjct:    5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQ 227          
The following BLAST results are available for this feature:
BLAST of DY258772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AATM_SCHPO1.043e-5644.21Aspartate aminotransferase, mitochondrial OS=Schiz... [more]
AAT4_ARATH6.763e-5650.46Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]
AAT_HAEIN5.725e-5547.20Aspartate aminotransferase OS=Haemophilus influenz... [more]
AAT_SALTI1.559e-5246.26Aspartate aminotransferase OS=Salmonella typhi GN=... [more]
AAT_SALTY2.660e-5246.26Aspartate aminotransferase OS=Salmonella typhimuri... [more]
AAT_PSEAE3.473e-5245.16Aspartate aminotransferase OS=Pseudomonas aerugino... [more]
AAT_ECOLI2.251e-5145.33Aspartate aminotransferase OS=Escherichia coli (st... [more]
AATC_CHICK5.546e-5045.74Aspartate aminotransferase, cytoplasmic OS=Gallus ... [more]
AATC_PANTR1.235e-4946.64Aspartate aminotransferase, cytoplasmic OS=Pan tro... [more]
AATC_HUMAN1.235e-4946.64Aspartate aminotransferase, cytoplasmic OS=Homo sa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BE11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258772 ID=DY258772; Name=DY258772; organism=Citrus clementina; type=EST; length=1200bp
CGTAAAATCACATAGATGGCCTCAACAATGCTTTCAATAGCTTCTGCAAC
TCCTTCAGCTTCGCTATCGATGCACGAGAAGCTCAAGGGCAAGGTTAAGC
TTGGAAGTACCACTAATTCGACAGCAGGATTCATTAAGACTAAATCCTTT
GGTCGAGTATCTATGGTTGCTGCTGTCAATGTTTCTCGTTTTGAGGGTGT
AACGATGGCTCCCCCCGATCCAATTCTTGGAGTTTCTGAAGCTTTTAAAG
CTGACACAGATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACC
GAAGAGCTACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCT
TATGCTGGAAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGG
CTGCATTCAATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCA
GTGCTAAAGGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGG
TTCTCTTCGGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAA
AAGTACTAATATCATCTCCAACATGGGGTAACCACAAGAACATTTTCAAT
GATGCTAGAGTTCCATGGTCTGAGTACCGCTACTATGATCCAAAAACAGT
GGGTTTGGATTTTGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGTG
GATCTTTTATTCTGCTTCATGGTTGTGCTCACAACCCCACTGGCATTGAT
CCAACCCCTGAACAATGGGAAAAAATTGCTGATGTCATTCAAGAGAAAAA
TCATATCCCATTTTTCGATGTTGCCTACCAGGTATGATTTCCTGAAATCA
AGATATAAAATGAATCTCAAATGTCATCAGACCTGCTCAAATGGAAGTTA
AAGAAATTTCAAAGTTCATTCCGTAAATTTAACTCTTTGAAGAACCCCCC
CCCACAAAAAAAACCCTTTGAAGTACTTTAGGGAATTTCCAAGTGGAAAC
CCTTTACAAAGAAGCTCCCACCTGTGGAAAATTGGTTGGCCAACCCCGGG
GAAGGGGAGCTTTTCTTGTTGCTCCAATCACATAAAAAAAAAAAACCCTT
GGTTCCTTTATTCACAAAAAAGAAAATGGGAAACAAAATAAAAATGTTTT
GGCCTTGTTTTCCCCCCCCCTCTGAATATTTTAAAACAAAAAAAGGGGAG
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