DY258772

Overview
NameDY258772
Unique NameDY258772
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1200
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_PONAB (Aspartate aminotransferase, cytoplasmic OS=Pongo abelii GN=GOT1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.752e-49
Identity = 103/223 (46.19%), Postives = 139/223 (62.33%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++  P+VL VVKK E  +  +   N EYLPI GLA F    + L  G D+  LKE+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLD +G++ D++ AP  S ++LH CAHNPTG DPTPEQW++IA V++ +   PFFD AYQ
Sbjct:    5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGLLNDLENAPEFSIVVLHACAHNPTGTDPTPEQWKQIASVMKHRFLFPFFDSAYQ 227          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_MACFA (Aspartate aminotransferase, cytoplasmic OS=Macaca fascicularis GN=GOT1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.752e-49
Identity = 104/223 (46.64%), Postives = 138/223 (61.88%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++  P+VL VVKK E  +  +   N EYLPI GLA F    + L  G D+  LKE+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLD +G + D++ AP  S I+LH CAHNPTG DPTPEQW++IA V++ +   PFFD AYQ
Sbjct:    5 SVFSEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIIVLHACAHNPTGTDPTPEQWKQIASVMKHRFLFPFFDSAYQ 227          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_PIG (Aspartate aminotransferase, cytoplasmic OS=Sus scrofa GN=GOT1 PE=1 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 1.366e-48
Identity = 102/223 (45.74%), Postives = 136/223 (60.99%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  A P  +  +   F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +      N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F  A       YRY+D +  GLD +G ++D++ AP  S  +LH CAHNPTG DPTPEQW++IA V++ +   PFFD AYQ
Sbjct:    5 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANDSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQ 227          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_HORSE (Aspartate aminotransferase, cytoplasmic OS=Equus caballus GN=GOT1 PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 3.043e-48
Identity = 101/223 (45.29%), Postives = 135/223 (60.54%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +      N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       Y Y+D    GLD +G + D++ AP  S  +LH CAHNPTG DPTPEQW++IA V++ +   PFFD AYQ
Sbjct:    5 SIFVEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQKIANNSSLNHEYLPILGLAEFRSCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLSRWYNGTNNKNTPVYVSSPTWENHNGVFSGAGFKDIRSYHYWDATKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQ 227          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_YEAST (Aspartate aminotransferase, cytoplasmic OS=Saccharomyces cerevisiae GN=AAT2 PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 5.190e-48
Identity = 92/220 (41.82%), Postives = 132/220 (60.00%), Query Frame = 1
Query:  175 VNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            ++ + F  + + PPD + G+ + +  D    K++LG+GAYR +  +P+VL  VK AE L+  +   N EYL I GL +     A+++FG  +   +E RV +VQ LSGTG+L ++A    ++FP   V +S PTW NH  IF +  +  + Y Y+  +T  LD  G +  I+ AP GS  +LH CAHNPTG+DPT EQW +I D I  KNHI  FD AYQ
Sbjct:    1 MSATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAFQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQ 220          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_MOUSE (Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 8.854e-48
Identity = 101/223 (45.29%), Postives = 138/223 (61.88%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  APP  +  ++  F+ D D +K+NLGVGAYRT+E QP+VL VV+K E  +  +   N EYLPI GLA F    + L+ G ++  ++E RV  VQ L GTG+LR+ A  + R++ G       + +SSPTW NH  +F+ A       Y Y+D +  GLD +G + D++ AP  S  +LH CAHNPTG DPTPEQW++IA V+Q +   PFFD AYQ
Sbjct:    5 SVFAQVPQAPPVLVFKLTADFRDDPDPRKVNLGVGAYRTDESQPWVLPVVRKVEQKIANDNSLNHEYLPILGLAEFRSCASRLVLGDNSPAIRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPIYVSSPTWENHNAVFSAAGFKDIRPYCYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAAVMQRRFLFPFFDSAYQ 227          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_SCHPO (Aspartate aminotransferase, cytoplasmic OS=Schizosaccharomyces pombe GN=aat2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.510e-47
Identity = 98/218 (44.95%), Postives = 135/218 (61.93%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF---PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            F  +  A  D I  ++  +  D D KK+N+ VGAYR +  +P++L  VKKA  ++ E+   N EYLPI GL  F K  AE+LF  +  +L E RVA++Q +SGTG+  LAA+ IE ++    GA V IS+PTW  H+ ++    V    Y Y+D K    D+EGM++ IK+AP GS  LLH CAHNPTGIDPT EQW  I + +  + H+  FD+AYQ
Sbjct:    6 FANIEEAKADAIFKLNAQYHQDEDPKKVNMSVGAYRDDTGKPWILPAVKKASKIVEEQASFNHEYLPIAGLPRFTKAAAEVLFRPNPHLLSEDRVASMQSVSGTGANFLAASFIETFYVKHTGAHVYISNPTWPVHRTLWEKLGVTVDTYPYWDAKNRSFDYEGMLSTIKSAPEGSIFLLHACAHNPTGIDPTREQWLSIFESLLSRKHLVVFDIAYQ 223          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_RAT (Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus GN=Got1 PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 3.364e-47
Identity = 100/223 (44.84%), Postives = 138/223 (61.88%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  APP  +  +   F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +  +   N EYLPI GLA F    ++L+ G ++  L+E RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLD +G + D++ AP  S  +LH CAHNPTG DPT E+W++IA V++ +   PFFD AYQ
Sbjct:    5 SFFAQVPQAPPVLVFKLIADFRDDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQKIANDHSLNHEYLPILGLAEFRSCASQLVLGDNSPALRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPVYVSSPTWENHNGVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTEEEWKQIAAVMKRRFLFPFFDSAYQ 227          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_BOVIN (Aspartate aminotransferase, cytoplasmic OS=Bos taurus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 188.734 bits (478), Expect = 5.739e-47
Identity = 101/223 (45.29%), Postives = 134/223 (60.09%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +      N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F  A       Y Y+D    GLD +G + D++ AP  S  +LH CAHNPTG DPTPEQW++IA V++ +   PFFD AYQ
Sbjct:    5 SIFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQRIANDSSINHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQCLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFIAAGFKDIRSYHYWDAAKRGLDLQGFLNDLEKAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQ 227          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC_CAEEL (Probable aspartate aminotransferase, cytoplasmic OS=Caenorhabditis elegans GN=T01C8.5 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 8.287e-46
Identity = 95/219 (43.38%), Postives = 138/219 (63.01%), Query Frame = 1
Query:  181 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAE-NLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW-SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            +S F+G+ +APP  +   ++ +  +T   K+NL +GAYRTEE QP+VL VV + E  +  +   N EYLP+ G   F K   EL+ GA++  +KE+R   VQ LSGTG+LR  A  +        V +S+PTWGNHK +F  A     ++Y ++D     +  E  ++D+++AP  S I+LHGCAHNPTG+DPT EQW+ +A+VI+ KN   FFD+AYQ
Sbjct:    1 MSFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIANDTSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLASVCNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNLFTFFDIAYQ 219          
The following BLAST results are available for this feature:
BLAST of DY258772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AATC_PONAB2.752e-4946.19Aspartate aminotransferase, cytoplasmic OS=Pongo a... [more]
AATC_MACFA2.752e-4946.64Aspartate aminotransferase, cytoplasmic OS=Macaca ... [more]
AATC_PIG1.366e-4845.74Aspartate aminotransferase, cytoplasmic OS=Sus scr... [more]
AATC_HORSE3.043e-4845.29Aspartate aminotransferase, cytoplasmic OS=Equus c... [more]
AATC_YEAST5.190e-4841.82Aspartate aminotransferase, cytoplasmic OS=Sacchar... [more]
AATC_MOUSE8.854e-4845.29Aspartate aminotransferase, cytoplasmic OS=Mus mus... [more]
AATC_SCHPO1.510e-4744.95Aspartate aminotransferase, cytoplasmic OS=Schizos... [more]
AATC_RAT3.364e-4744.84Aspartate aminotransferase, cytoplasmic OS=Rattus ... [more]
AATC_BOVIN5.739e-4745.29Aspartate aminotransferase, cytoplasmic OS=Bos tau... [more]
AATC_CAEEL8.287e-4643.38Probable aspartate aminotransferase, cytoplasmic O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BE11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258772 ID=DY258772; Name=DY258772; organism=Citrus clementina; type=EST; length=1200bp
CGTAAAATCACATAGATGGCCTCAACAATGCTTTCAATAGCTTCTGCAAC
TCCTTCAGCTTCGCTATCGATGCACGAGAAGCTCAAGGGCAAGGTTAAGC
TTGGAAGTACCACTAATTCGACAGCAGGATTCATTAAGACTAAATCCTTT
GGTCGAGTATCTATGGTTGCTGCTGTCAATGTTTCTCGTTTTGAGGGTGT
AACGATGGCTCCCCCCGATCCAATTCTTGGAGTTTCTGAAGCTTTTAAAG
CTGACACAGATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACC
GAAGAGCTACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCT
TATGCTGGAAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGG
CTGCATTCAATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCA
GTGCTAAAGGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGG
TTCTCTTCGGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAA
AAGTACTAATATCATCTCCAACATGGGGTAACCACAAGAACATTTTCAAT
GATGCTAGAGTTCCATGGTCTGAGTACCGCTACTATGATCCAAAAACAGT
GGGTTTGGATTTTGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGTG
GATCTTTTATTCTGCTTCATGGTTGTGCTCACAACCCCACTGGCATTGAT
CCAACCCCTGAACAATGGGAAAAAATTGCTGATGTCATTCAAGAGAAAAA
TCATATCCCATTTTTCGATGTTGCCTACCAGGTATGATTTCCTGAAATCA
AGATATAAAATGAATCTCAAATGTCATCAGACCTGCTCAAATGGAAGTTA
AAGAAATTTCAAAGTTCATTCCGTAAATTTAACTCTTTGAAGAACCCCCC
CCCACAAAAAAAACCCTTTGAAGTACTTTAGGGAATTTCCAAGTGGAAAC
CCTTTACAAAGAAGCTCCCACCTGTGGAAAATTGGTTGGCCAACCCCGGG
GAAGGGGAGCTTTTCTTGTTGCTCCAATCACATAAAAAAAAAAAACCCTT
GGTTCCTTTATTCACAAAAAAGAAAATGGGAAACAAAATAAAAATGTTTT
GGCCTTGTTTTCCCCCCCCCTCTGAATATTTTAAAACAAAAAAAGGGGAG
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