DY258780

Overview
NameDY258780
Unique NameDY258780
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1061
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.820e-47
Identity = 103/258 (39.92%), Postives = 145/258 (56.20%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQER 785
            D G+PQ+YR   GFG  T++ VN  G+  YVKFH+K   G+ C  D E A  VG    S A +DL+ +I  G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++
Sbjct:  184 DRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRES-AQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQ 440          
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.295e-47
Identity = 97/260 (37.31%), Postives = 151/260 (58.08%), Query Frame = 3
Query:   15 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF--MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENN-FKQPGERYRSWAPDRQER 785
            F D G+P+ YRH+ GFG  TF+ +N N +  +VKFH+K   G++ L +  EA +V   +   + +DLY+SI  G++P WK+Y+Q +       + ++P D+TK WP    PL  VG   LN+N DN+FAE E  AF P  VVPGI +S DKMLQ R+F+YGD  R+RLG N+  +PVNA +CPH+  H DG M     +  + V Y P+ ++  +    +  P   + G  +      +++ + QP   +  +  ++++R
Sbjct:  180 FSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHFKTQQGIENLTN-AEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNPFDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQR 438          
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_STRCO (Catalase OS=Streptomyces coelicolor GN=katA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 8.221e-47
Identity = 112/267 (41.95%), Postives = 145/267 (54.31%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKC-PHRNNHY--DGFMNFMHRDEEV-DYFPSRYD---PTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            +W   D GIP  YRHM+GFG  T+   N  G+  +VK+H+K   G++CL  DE A   G    SH T DL  +I  G YP W L++Q +       + F+P DVTK WP    PL+ VGRLVL++N DN FAE E  AF+P   VPGI  S DKMLQ R+FAY D  R+RLG N+  L VNAPK  P    +Y  DG M    +     +Y P+ YD    T      P+     TG  E     K+++F Q G  YR  + D ++R
Sbjct:  176 TWLMGDRGIPASYRHMDGFGSHTYQWTNARGESFFVKYHFKTDQGIRCLTADEAAKLAGEDPTSHQT-DLVQAIERGVYPSWTLHVQLMPVAEAANYRFNPFDVTKVWPHADYPLKRVGRLVLDRNPDNVFAEVEQAAFSPNNFVPGIGPSPDKMLQGRLFAYADAHRYRLGVNHTQLAVNAPKAVPGGAANYGRDGLMAANPQGRYAKNYEPNSYDGPAETGTPLAAPLAVSGHTGTHEAPLHTKDDHFVQAGALYRLMSEDEKQR 441          
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_DESVM (Catalase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=katA PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 8.221e-47
Identity = 101/257 (39.30%), Postives = 144/257 (56.03%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKE--NNFKQPGERYRSWAPDRQE 782
            D GIP  YRHM GFG  TF+ ++ + + ++VKFH +   G+K L D E    V     SH  +DLYDSI  G++P W +Y+Q +     ++  + P D+TK W     PL  VG L LN+N +N+FAE E  AFNP  VVPGI +S DKMLQ R+F+YGD  R+RLG N+ ++PVNA +CP  + H DG M    +    + Y P+ Y   +    +  P   I G        ++  + + QPG  +R   P +Q+
Sbjct:  181 DRGIPASYRHMHGFGSHTFSFISPDNQRYWVKFHLRTQQGIKNLTDAEAEAIVARDRESHQ-RDLYDSIERGDFPRWTMYVQVMPEKDAEKLPYHPFDLTKVWFHKDCPLIEVGVLELNRNPENYFAEVEQAAFNPANVVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHLIPVNAARCPVHSYHRDGAMRVDGNHGSTLAYEPNSYGEWQEQPDFAEPPLAIRGDAAHWNFREDDADYYDQPGRLFRLMTPQQQD 436          
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.402e-46
Identity = 103/258 (39.92%), Postives = 140/258 (54.26%), Query Frame = 3
Query:   27 GIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRY-----DPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQE 782
            GIP  YRHM GFG  T++ +N   K  +VKFH K   G+K L D E    +     SH  +DLY+SI  G++P+WK  IQ +  +  D +  +P D+TK WP    PLQ VG L LN+N +N+FAE E  AFNP  +V GI +S DKMLQ R+F+YGD QR+RLG N   +PVN P+CP    H DG M    +      Y P+ Y      P +      +  DV      +     ++ + QPG+ +R    D Q+
Sbjct:  183 GIPASYRHMHGFGSHTYSFLNAENKRIWVKFHLKTMQGIKNLTDQEAEAIIAKDRESHQ-RDLYESIERGDFPKWKFQIQLMTEEEADNYRINPFDLTKVWPHKDFPLQDVGILELNRNPENYFAEVEQSAFNPMNIVEGIGFSPDKMLQGRLFSYGDAQRYRLGVNSEQIPVNKPRCPFHAFHRDGAMRVDGNYGSAKGYEPNSYGEWQDSPEKKEPPLKVHGDVFNYNERE---YDDDYYSQPGDLFRLMPADEQQ 436          
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.832e-46
Identity = 101/257 (39.30%), Postives = 144/257 (56.03%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREK-ACIEKENNFKQPGERYRSWAPDRQER 785
            D G+P  YR + GFG  T++ +NK+ +  +VKFH++   G+K L+DDE    VG    S + +DL+++I  G+YP WKL IQ +         ++P D+TK WP    PL  VG   LN+N DN+F++ E  AF+P  +VPGI +S DKMLQ R+F+YGD  R+RLG N+  +PVNAPKCP  N H DG M    +    + Y P+     +    +  P   I G  +     E E+ F QP   Y   + D  +R
Sbjct:  181 DRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQGIKNLMDDEAEALVGKDRES-SQRDLFEAIERGDYPRWKLQIQIMPEKEASTVPYNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNYHRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQR 436          
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.832e-46
Identity = 102/218 (46.79%), Postives = 137/218 (62.84%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 641
            S+ F D GIP  YRHM G+G  TF LVN  G+  Y KFH+K   G+K  I  EEA ++  ++  ++ +DLY++IA GN+P W  YIQ +  +  + + ++P D+TK W     PL PVGR VLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+F+Y DT RHRLG NYL LPVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  197 SFLFSDRGIPDGYRHMNGYGSHTFKLVNAQGQPVYCKFHYKTNQGIKN-IPVEEADRLAATDPDYSIRDLYNAIANGNFPSWTFYIQVMTFEQAENWKWNPFDLTKVWSHKEFPLIPVGRFVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVN---CPYRTRVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_SCHPO (Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.392e-46
Identity = 94/220 (42.73%), Postives = 127/220 (57.73%), Query Frame = 3
Query:   12 FFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYP 671
            F D  G P  YR M+GF   T+  VN  G+ +Y K+H+    G K L + EEA  + GSN  HA QDL+++I  G+YP W LY+Q + P   +++ ++  D+TK WP   +P+Q VGR  LN+N  NFFA+ E   F+P  +VPGI  S D +LQ R F+Y DT RHRLG N+  +PVN+PKCP  N   DG MN          +PS   P    +  P
Sbjct:  185 FSDLGGTPYSYRFMDGFSSHTYKFVNDKGEFYYCKWHFITNQGTKGLTN-EEAAALDGSNPDHARQDLFEAIERGDYPSWTLYVQVMTPQEAEKYRYNIFDLTKVWPHKDVPMQRVGRFTLNQNPTNFFADIEQAGFSPSHMVPGIEVSADPVLQVRTFSYPDTHRHRLGANFEQIPVNSPKCPVFNYSRDGPMNVNGNQGNWPNYPSSIRPLAKVQYEP 403          
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 4.080e-46
Identity = 96/253 (37.94%), Postives = 144/253 (56.92%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMH-RDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRS 761
            +W + ++G P  YR M+GFGV  +  +N+ G V+YVKF WK   G+K L  ++   ++ G + +H T DLY +I  GNYP+W LY++ + P+   + D++ LD TK W    +P + VG + LN+  +NFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LPVN P     N++ +G  N     + +V+Y PSR        ++      + G  ++  I K  +F Q G  YRS
Sbjct:  194 TWVYSNLGTPASYRTMDGFGVHAYKWINQQGDVNYVKFQWKSQQGIKSLRPNK-VTEMQGKDFNHLTNDLYAAIGRGNYPKWDLYVKVLSPEALSKLDYNGLDATKVWLN--VPDRKVGTMTLNRLPENFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLTSVNNHNQNGLSNNAQLSNGDVNYEPSRKLNLAEDNQFKAVETKLVGTVQQKAISKPRDFYQAGVLYRS 443          
BLAST of DY258780 vs. ExPASy Swiss-Prot
Match: CATA_VIBF1 (Catalase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=katA PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.080e-46
Identity = 107/258 (41.47%), Postives = 143/258 (55.43%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM----NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREK-ACIEKENNFKQPGERYRSWAPDRQ 779
            D GIP  YRHM GFG  TF+ +N + +  +VKFH+K   G+K L D E A  +G    SH  +DL +SI   ++P+W L +Q +         ++P D+TK WP    PL  VG   LN+N  NFFAE E  AFNP  VVPGI +S DKMLQ R+FAYGD QR+RLG N+  +PVNAP+CP  + H DG M    NF      + Y P+          +  P+  + G        E E+ F QPG+ +R    ++Q
Sbjct:  180 DRGIPATYRHMHGFGSHTFSFINSDNERFWVKFHFKSQQGIKNLSDAEAAQVIGQDRESHQ-RDLLESIDNQDFPKWTLKVQIMPEADAATVPYNPFDLTKVWPHKDYPLIEVGEFELNRNPQNFFAEVEQSAFNPANVVPGISFSPDKMLQGRLFAYGDAQRYRLGVNHQHIPVNAPRCPVHSYHRDGAMRVDGNF---GSTLGYEPNNEGQWAEQPDFAEPALNLDGAAAHWDHREDEDYFSQPGDLFRLMTAEQQ 433          
The following BLAST results are available for this feature:
BLAST of DY258780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_BORBR4.820e-4739.92Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_PSEAE6.295e-4737.31Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATA_STRCO8.221e-4741.95Catalase OS=Streptomyces coelicolor GN=katA PE=3 S... [more]
CATA_DESVM8.221e-4739.30Catalase OS=Desulfovibrio vulgaris (strain Miyazak... [more]
CATA_BACFR1.402e-4639.92Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATA_PROMI1.832e-4639.30Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CATA_DANRE1.832e-4646.79Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATA_SCHPO2.392e-4642.73Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1... [more]
CATA_VIBPA4.080e-4637.94Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATA_VIBF14.080e-4641.47Catalase OS=Vibrio fischeri (strain ATCC 700601 / ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BG05FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258780 ID=DY258780; Name=DY258780; organism=Citrus clementina; type=EST; length=1061bp
CATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCAC
ATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAA
AGTGCACTATGTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTT
TGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCAC
GCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTG
GAAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACT
TTGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTG
CAGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGC
GGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCT
ACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGAT
ACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGC
ACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCA
TGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACT
CGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCG
TGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGA
GATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTTCCTTATCGATGG
ATTTAAGGCTTTATGTGACCCACGTGTCACCCATGAAGTTCGCAGCCTAT
GGGTCTCTTACTGGTCTCANGGCGACAGATCTCTGGGTCAAAAGCTTAGC
TTCTCGCCTCAATGTGAGGGCAAGCATTTGAAAGGTGTCCTTGACCTGGA
ACACTTGGATGCTTTTTGACTTGCCAAGAAGGAAGCAAGGAATGGAACAC
CAAGGGTTGCACCTTTGTGAAAAAAATTTCCCATCCCATGGTTTGGCTTT
TTGTATATTTG
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