DY258796
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_PARD8 (Elongation factor G OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=fusA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13 Identity = 58/190 (30.53%), Postives = 89/190 (46.84%), Query Frame = 3 Query: 78 GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYA---SQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGL 638 G +D KG E SV GF+ A K G LA G + V L + H + I A + A P L+EP+ +E+ PE+++G + LN++RG V E M+ T +KA +P+ E+FG+ + LR TSG+A F H+ +SS S A Q++ +++ R L Sbjct: 529 GTLQFIDEVKGGNIPKEFIPSVQKGFEKAMKNGVLA-----GYPLDKLKVTLIDGSFHPVDSDQLSFEIAAIQAFKNASAKAGPVLMEPIMQMEVVTPEESMGDVIGDLNKRRGQV-EGMETSRTGARIVKAKVPLAETFGYVTALRTITSGRATSSMQFSHYAQVSS------SIAKQVLTEVQGRVDL 706
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_PORGI (Elongation factor G OS=Porphyromonas gingivalis GN=fusA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.515e-12 Identity = 55/187 (29.41%), Postives = 87/187 (46.52%), Query Frame = 3 Query: 78 GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGL 638 G VD KG E S+ GFQ A K G LA + + V D H + ++ A + + A P L+EP+ +E+ PE+++G + LN++RG V E M+ T +KA +P+ E FG+ + LR TSG+A F H+ + P + A Q++ + + R L Sbjct: 528 GELQFVDEVKGGNIPKEFIPSIQKGFQRAMKNGVLAGYPLDQLKVTVIDGSFHPVDSDQLSFEIC--ALQAFKNACEKAHPTLMEPIMKLEVVTPEESMGDVIGDLNKRRGQV-EGMESSRTGARIVKAKVPLAEMFGYVTALRTITSGRATSTMTFSHYSEV------PSTIAKQVLTEAQGRVDL 705
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_PORG3 (Elongation factor G OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=fusA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.515e-12 Identity = 55/187 (29.41%), Postives = 87/187 (46.52%), Query Frame = 3 Query: 78 GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGL 638 G VD KG E S+ GFQ A K G LA + + V D H + ++ A + + A P L+EP+ +E+ PE+++G + LN++RG V E M+ T +KA +P+ E FG+ + LR TSG+A F H+ + P + A Q++ + + R L Sbjct: 528 GELQFVDEVKGGNIPKEFIPSIQKGFQRAMKNGVLAGYPLDQLKVTVIDGSFHPVDSDQLSFEIC--ALQAFKNACEKAHPTLMEPIMKLEVVTPEESMGDVIGDLNKRRGQV-EGMESSRTGARIVKAKVPLAEMFGYVTALRTITSGRATSTMTFSHYSEV------PSTIAKQVLTEAQGRVDL 705
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_BACV8 (Elongation factor G OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=fusA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.996e-12 Identity = 55/170 (32.35%), Postives = 78/170 (45.88%), Query Frame = 3 Query: 72 TIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ---LTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSS 572 T G +D KG E SV GFQ A K G LA G + VVL + H + I A + A P L EP+ +E+ PE+ +G + LN++RG V E M+ + +KA +P+ E FG+ + LR TSG+A +DH +SS Sbjct: 525 TQGGLQFIDEVKGGNVPKEFIPSVQKGFQTAMKNGVLA-----GYPLDSLKVVLKDGSFHPVDSDQLSFEICAIQAYKNACAKAGPVLTEPIMKLEVVTPEENMGDVIGDLNKRRGQV-EGMESSRSGARIVKAKVPLAEMFGYVTALRTITSGRATSSMTYDHHAQVSS 688
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_SULDN (Elongation factor G OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=fusA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.830e-12 Identity = 48/162 (29.63%), Postives = 76/162 (46.91%), Query Frame = 3 Query: 96 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGIC----FEVCDVVLHADAIHRGGGQVIP---TARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWD 560 D G + NEIK V+ + E AE G+ E D+ L+ + H + A A+P +LEP+ VE++ PE +G + LN++RG V R G + + A++P+ E FG+S+ LR+AT G+A FDH++ Sbjct: 521 DAGTGFVFHNEIKGGVIPKEYIPAVEKGCAETMSNGVLAGYPMEDIDITLYDGSYHEVDSNEMAFKLAASMGFKEGCRKARPAILEPLMKVEVEVPEDYMGDVIGDLNRRRGQVTNMGDRSGNKI--VDAFVPLAEMFGYSTDLRSATQGRATYSMEFDHYE 680
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_BACFR (Elongation factor G OS=Bacteroides fragilis GN=fusA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.336e-11 Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 72 TIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSS 572 T G VD KG E SV GFQ A K G LA + + + D H + ++ A + + A P L+EP+ +E+ PE+ +G + LN++RG V E M+ + +KA +P+ E FG+ + LR TSG+A V+ H +SS Sbjct: 525 TQGGLQFVDEVKGGNIPKEFIPSVQKGFQTAMKNGVLAGYPLDSLKVTLVDGSFHPVDSDQLSFEIC--AIQAYKNACAKAGPVLMEPIMKLEVVTPEENMGDVIGDLNKRRGQV-EGMESSRSGARIVKAMVPLAEMFGYVTALRTITSGRATSSMVYSHHAQVSS 688
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_BACFN (Elongation factor G OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=fusA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.336e-11 Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 72 TIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSS 572 T G VD KG E SV GFQ A K G LA + + + D H + ++ A + + A P L+EP+ +E+ PE+ +G + LN++RG V E M+ + +KA +P+ E FG+ + LR TSG+A V+ H +SS Sbjct: 525 TQGGLQFVDEVKGGNIPKEFIPSVQKGFQTAMKNGVLAGYPLDSLKVTLVDGSFHPVDSDQLSFEIC--AIQAYKNACAKAGPVLMEPIMKLEVVTPEENMGDVIGDLNKRRGQV-EGMESSRSGARIVKAMVPLAEMFGYVTALRTITSGRATSSMVYSHHAQVSS 688
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_HELPY (Elongation factor G OS=Helicobacter pylori GN=fusA PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.744e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = 3 Query: 108 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 635 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_HELPS (Elongation factor G OS=Helicobacter pylori (strain Shi470) GN=fusA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.744e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = 3 Query: 108 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 635 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EFG_HELPJ (Elongation factor G OS=Helicobacter pylori J99 GN=fusA PE=3 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.744e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = 3 Query: 108 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 635 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692 The following BLAST results are available for this feature:
BLAST of DY258796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258796 ID=DY258796; Name=DY258796; organism=Citrus clementina; type=EST; length=835bpback to top |