DY258796

Overview
NameDY258796
Unique NameDY258796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_SULIL (Elongation factor 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 83/222 (37.39%), Postives = 124/222 (55.86%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL  ++  + D+
Sbjct:  524 KILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_SULIK (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=fusA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 83/222 (37.39%), Postives = 124/222 (55.86%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL  ++  + D+
Sbjct:  524 KILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_SULIA (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.27) GN=fusA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 83/222 (37.39%), Postives = 124/222 (55.86%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL  ++  + D+
Sbjct:  524 KILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 9.506e-34
Identity = 82/222 (36.94%), Postives = 124/222 (55.86%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            +IL E+  WD D AKKI          N+ V+   GVQ+L E+ D+++ GF+ A KEG LA E +RG+   + D ++H D  HRG  Q+ P  R  I+A  LT+KP LLEP+  ++I+ P   +G +  V+ +KRG +    Q     +  I A +PV ESF  +S LRAA++G+AF    F  W  +      P S    +++ IR+RKGL  ++  + D+
Sbjct:  525 RILKEQADWDYDEAKKIVAIDENI---NVFVNATSGVQHLREVMDTILQGFRLAMKEGPLAHEPIRGLKVVLHDAIIHEDPAHRGPAQLYPAVRNAIFAGFLTSKPTLLEPLQKLDIRVPMDFVGNVSGVITRKRGKILNMTQMGS--IARITAEIPVSESFELASELRAASAGRAFWGTEFSRWAPV------PDSLLLDVIMKIRERKGLPKELPKVEDF 735          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.241e-33
Identity = 85/222 (38.29%), Postives = 126/222 (56.76%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            KIL ++  WD D AKKI          N+ +D   GVQ+L EI D+++ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT+KP LLEP+  ++I+ P + LG + +V+ +KRG V   +Q     +  + A +PV ESF  +S LRA+++G+AF    F  W  +      P S    L++ IR+RKG   Q+  + D+
Sbjct:  525 KILRDQAEWDYDEAKKIVAIDENI---NVFIDATSGVQHLREIMDTLLQGFRLAMKEGPLAFEPVRGVKVVLHDAVVHEDPAHRGPAQLYPAVRNAIFAGILTSKPTLLEPLQKLDIRIPMEYLGNVTAVITRKRGKVINVVQTGN--VARVYAEIPVGESFELASELRASSAGRAFWGTEFSRWAPV------PDSILVDLIMKIRERKGKPKQLPKVEDF 735          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.621e-33
Identity = 82/222 (36.94%), Postives = 129/222 (58.11%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            KIL ++  WD D AKKI          N+++D   GVQ+L EI D+++ G++ A +EG LA E +RG+   + D  +H D  HRG  Q+ P  R  I+A+ L +KP LLEP+  ++I+ P + +G + +VL++KRG V   M + G+ +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S  + ++L IR+RKGL  ++  + D+
Sbjct:  524 KILRDQADWDYDEAKKIIAIDENV---NVLIDATSGVQHLREIMDTMLQGYRLAMREGPLAHEPIRGVKVILHDATIHEDPAHRGPAQIYPAVRNAIFAAMLMSKPTLLEPLQKLDIRVPMEFVGNVTAVLSRKRGKVL-NMTQSGS-VARILAEIPVSESYELASDLRGSTGGRAFWGTEFSKWAPV------PDSILTDVILKIRERKGLPKELPKVEDF 734          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METTP (Elongation factor 2 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=fusA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 85/217 (39.17%), Postives = 121/217 (55.76%), Query Frame = 3
Query:   18 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            E G DK+ A+ +  F    +G NM ++M KG+QYL E  + ++ GF+ A   G +  E ++GI  ++ DV LH DA+HRG  QVIP  R+ + A  L A P LLEP+  V IQ P+  +GG  S +  +RG V   M+  G  +  IKA +PV E FGF+  +R+AT G+A     F  ++ +      P +     V  IR RKGLK +M   SDY
Sbjct:  523 EAGMDKEEARNMVNF----VGTNMFLNMTKGIQYLRETMELILEGFEEAITAGPICREPVQGIKAKLVDVKLHEDAVHRGPAQVIPAVRQAVQAGILMANPTLLEPMQYVFIQVPQDQMGGAMSEIQGRRG-VILSMETEG-DMITIKAKMPVAEMFGFAGAIRSATEGRALWSTEFAGFEPI------PANMMLDTVRQIRTRKGLKPEMPTPSDY 727          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.341e-32
Identity = 85/215 (39.53%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            G DKD AK +        G NM++DM KG+QYLNE  + ++ G   A   G LA+E ++ +   + DV LH DAIHRG  QVIP  R  I    L A   LLEPV  ++I  P   +G   S +  +RG VF +MQ  G  +  +    PV E FGF+  +R+AT G+A     F  ++++      P +    +V+ IRKRKGLK QM   SDY
Sbjct:  526 GMDKDEAKNV----KHIKGTNMLIDMTKGIQYLNETMELIIEGINEALAGGPLADEPVQNLKMTLTDVKLHEDAIHRGPAQVIPAVRGAIKGGMLIAGDSLLEPVQKIQISVPMDQMGAATSQIQGRRGQVF-DMQSEGDTI-TVVGKAPVAELFGFAGDIRSATEGRAMWNTEFAGFELV------PNNLVKDVVVAIRKRKGLKEQMPTPSDY 728          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_ENCCU (Elongation factor 2 OS=Encephalitozoon cuniculi GN=EFT1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.216e-32
Identity = 77/199 (38.69%), Postives = 109/199 (54.77%), Query Frame = 3
Query:   36 DLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRK 632
            D  +KIWC+ PE    N++VD  KG+  +NEIK+ V  GF+ A  +G L  E MRG+ FE+ D VLHADAIHRG  Q++   + +     L A P L EP+Y VEI  P    G + ++L  KRG   +    PG     I   LPV ESF F+  L++ + G+A     F H+ ++  +  +P S   + V  +RK K
Sbjct:  636 DWIRKIWCYAPEVNPLNLLVDGTKGISIINEIKEHVNTGFRAAVNDGPLIGEVMRGLKFELKDAVLHADAIHRGINQLLQPVKNLCKGLLLAAGPILYEPIYEVEITTPNDYSGAVTTILLSKRGTAEDFKTLPGNDTTMITGTLPVKESFTFNEDLKSGSRGKAGASMRFSHYSILPGNLEDPNSLMFKTVEAVRKLK 834          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METMJ (Elongation factor 2 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=fusA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.518e-31
Identity = 82/215 (38.14%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            G DKD AK +          NM +DM KG+QYLNE  + V+ G++ A + G LA+E ++ +   + DV LH DAIHRG  QVIP  R  + A  L A   LLEP+  ++I  P + +G   S +  +RG VF+ +    T    I    PV E FGF+  +R+AT G+A     F  ++++      P    + +V DIRKRKGLK Q+    DY
Sbjct:  526 GMDKDEAKNVKAIE----ATNMFIDMTKGIQYLNETMELVLDGWREALRGGPLADELVQNLKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGVLMAGDSLLEPIQKIQITVPSEQMGAATSQIQGRRGQVFDMLSEGDT--MTIVGKAPVAELFGFAGDIRSATEGRAMWSTEFAGFELV------PAGIVNDVVKDIRKRKGLKEQIPRPDDY 728          
The following BLAST results are available for this feature:
BLAST of DY258796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
EF2_SULIL1.915e-3437.39Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIK1.915e-3437.39Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIA1.915e-3437.39Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULTO9.506e-3436.94Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA... [more]
EF2_SULAC1.241e-3338.29Elongation factor 2 OS=Sulfolobus acidocaldarius G... [more]
EF2_METS51.621e-3336.94Elongation factor 2 OS=Metallosphaera sedula (stra... [more]
EF2_METTP1.051e-3239.17Elongation factor 2 OS=Methanosaeta thermophila (s... [more]
EF2_METB62.341e-3239.53Elongation factor 2 OS=Methanoregula boonei (strai... [more]
EF2_ENCCU5.216e-3238.69Elongation factor 2 OS=Encephalitozoon cuniculi GN... [more]
EF2_METMJ1.518e-3138.14Elongation factor 2 OS=Methanoculleus marisnigri (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CA08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258796 ID=DY258796; Name=DY258796; organism=Citrus clementina; type=EST; length=835bp
CTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGATCTTGCCAAGAAA
ATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACATGGTTGTGGATAT
GTGCAAGGGAGTTCAGTACTTGAATGAAATTAAGGATTCAGTTGTTGCTG
GGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAAAACATGAGG
GGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCCGATGCTATCCA
CAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGTCATTTATGCAT
CCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCTACTTGGTGGAA
ATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGTGTTCTTAACCA
GAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGGTACCCCACTTT
ATAACATCAAGGCATACCTCCCGGTCGTTGAGTCTTTTGGATTTTCCAGC
ACTTTGAGAGCTGCAACCTCTGGACAGGCATTCCCTCAATGTGTGTTTGA
TCACTGGGACATGATGTCATCTGATCCATTGGAGCCGGGATCCCAGGCTT
CACAACTTGTTTTGGATATTAGGAAGAGGAAGGGTTTGAAAGGACAGATG
ACCCCCCTCTCTGATTATGAAAACAAGCTGTAAGCGCTTTTGCCATTATC
GATTGCTGGCCACTAGATTCATTTTTTTGCTGCCTTTGGTTTTGGTCCGT
TTTTTCCTTTGAAGGAAACAAGGTTAACTTTTTTGAATTTTGTTTTGGGA
ACCTCTGTTTTTTTAAATTGGGACCTCTCTATTTC
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