DY258796

Overview
NameDY258796
Unique NameDY258796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15417 contig Ccv1_Contig15417:408..1242. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.767e-31
Identity = 78/218 (35.78%), Postives = 121/218 (55.50%), Query Frame = 3
Query:   18 EFGWDKDLAKKIWCFGPETI-GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            E+G D+D AK +     ET+ G N  +D   G+QYLNE+ + ++ GF+ A +EG LA+E  RG+   + D  +H D +HRG  QVIP  +R IY   L A   LLEP+  + +  P+  +G +   +  +RG + EE+Q+ G  +  IK   PV E FGF++ +R+AT G+A        ++ +      P     Q++ +IR+RKGLK +     DY
Sbjct: 1047 EYGMDRDDAKAV-----ETVKGTNFFLDKTVGLQYLNEVMELLIEGFEEAMEEGPLAKEPCRGVKVSLVDAEIHEDPVHRGPAQVIPAIKRAIYGGMLLADTHLLEPMQYIYVTVPQDYMGAVTKEIQGRRGTI-EEIQQEGDTVI-IKGKAPVAEMFGFANDIRSATEGRAIWTTEHAGYERV------PEELEEQIIREIRERKGLKPEPPKPEDY 1251          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.837e-31
Identity = 82/215 (38.14%), Postives = 113/215 (52.56%), Query Frame = 3
Query:   24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            GW+KD AK I     +    N+ +DM KGVQYLNE  + ++ G   A + G LA+E ++ +   + DV LH DAIHRG  QVIP  R  + A  L A   LLEP+  + I  P   +G   S +  +RG V +      T    +   +PV E FGFS  +R+AT G+A     F  ++++      P S    +V+ IRKRKGLK QM    DY
Sbjct:  526 GWEKDEAKNI----KDISTTNIFIDMTKGVQYLNETMELILEGLHEALQGGPLADEPVQNMKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGILYAGDSLLEPIQKISITVPTDQMGNATSQIQGRRGSVLDITSEGDT--ITVVGRVPVAELFGFSGDIRSATEGRAMWNTEFAGFEIV------PNSLVKDVVIAIRKRKGLKEQMPRPEDY 728          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METS3 (Elongation factor 2 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.882e-30
Identity = 73/207 (35.27%), Postives = 120/207 (57.97%), Query Frame = 3
Query:   18 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGL 638
            E+G DK+ A+K+W    +    ++ ++  +G+QYL+E+K+ ++ GF+ A  +G LA+E   G+ F++ D  LH DA+HRG  QV+P  R  IYAS ++A P LLEP+  V I  P+  +G     +  +RG + +  Q     +  I++ +PV E FGF+  +R+A  G    +C++     MS     P    +Q+V +IR+RKGL
Sbjct:  524 EYGLDKEEARKVW----DVYNRSVFINATRGIQYLDEVKELLIEGFESALNDGPLAKEIAMGLKFKLHDAKLHEDAVHRGPAQVLPAIRNAIYASMMSAGPTLLEPMQKVFINTPQDYMGPCTREIQNRRGQIVDMGQE--GDMATIESKVPVAEMFGFAGDIRSAAEG----RCLWS--TEMSGFERLPREMQNQIVKEIRQRKGL 718          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.327e-30
Identity = 83/217 (38.25%), Postives = 116/217 (53.46%), Query Frame = 3
Query:   18 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            E G DK+ AK I          N+ +D  KG+QYLNE  + V+ GF+   + G L  E +  +   + D  LH DAIHRG  Q+IP +R+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG V   M   G  L  I+A +PV E FGF+  +R+AT G+A     F  +D++      P S  +++V  IR+RKGLK  +   SDY
Sbjct:  523 ELGMDKEQAKGI----AGIFNSNIFIDQTKGIQYLNETMELVLDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPASRQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG-VILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDVV------PSSILTEIVGQIRERKGLKKDLPKASDY 727          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 79/215 (36.74%), Postives = 113/215 (52.56%), Query Frame = 3
Query:   24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            G +KD AKKI          N   DM KG+QYLNE  + ++ GF    K G L++E   G+  ++ D  LH DA+HRG  QVIP +R+ I A+ L A   L EP   V IQ P++ +GG    +  +RG + +      T +   KA  PV E FGF+  +R+AT G+A     F  ++ +      P S  +++V  IRKRKGLK  +    D+
Sbjct:  525 GLNKDEAKKI----VNIFESNAYFDMTKGIQYLNETMELIIEGFTEVMKAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQVPQEQMGGATKEIQGRRGVIIDMTSEGDTTVIESKA--PVSELFGFAGDIRSATEGRAMWSTEFAGFEPL------PMSLMTEVVTGIRKRKGLKAALPQAEDF 727          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.164e-29
Identity = 77/215 (35.81%), Postives = 122/215 (56.74%), Query Frame = 3
Query:    3 KILSE--EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLK 641
            KI+ E  + G D + AK++ C        N++++M +G+ +L+E+K+ ++ GF+ A + G LA E  +G+  ++ D VLH DAIHRG  Q+IP AR  I  + + A P LLEP+  V I  P+  +G     ++ +RG +  +M++ G  +  IKA  PV E FGF+  +R AT G+      F  ++ +  D  E      QL+  IR+RKGLK
Sbjct:  522 KIVQELIKAGMDPEEAKRVMCI----YEGNVLINMTRGIVHLDEVKELIIQGFKEAMRNGPLAAEKCQGVKVKLMDAVLHEDAIHRGPAQMIPAARFGIRDAMMQANPVLLEPMQFVYINTPQDFMGAAMREISNRRGQIL-DMEQEG-DMAIIKAKCPVAEMFGFAGAIRGATQGRCLWSIEFAGYEKVPRDMQE------QLIKQIRERKGLK 724          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METAC (Elongation factor 2 OS=Methanosarcina acetivorans GN=fusA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.133e-29
Identity = 81/217 (37.33%), Postives = 117/217 (53.92%), Query Frame = 3
Query:   18 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            + G +K+ AK I          N+ +DM KG+QYLNE  + V+ GF+   + G L  E +  +   + D  LH DAIHRG  Q+IP AR+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG +   M   G  L  I+A +PV E FGF+  +R+AT G+A     F  +D++      P S  + +V  IR+RKGLK ++   SD+
Sbjct:  523 DLGMEKEEAKGI----VGIFNSNIFIDMTKGIQYLNETMELVLDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPAARQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG-IILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDVV------PSSILNDIVGQIRERKGLKKELPKASDF 727          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_ARCFU (Elongation factor 2 OS=Archaeoglobus fulgidus GN=fusA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.133e-29
Identity = 75/196 (38.27%), Postives = 109/196 (55.61%), Query Frame = 3
Query:   84 NMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            N+  D+ KG+QYLNE  + ++ GF+ A + G +A E   GI  ++ D  LH DA+HRG  QVIP  R  I+A+ L AKP LLEP   + I  P+  +G +   +  +RG +  EM+  G  +  I A  PV E FGF+  +R ATSG+A        W    +   L P +   + V+++RKRKGLK +M    D+
Sbjct:  539 NLFCDVTKGIQYLNETMELILEGFREAMRAGPIAREPCMGIKVKLVDCKLHEDAVHRGPAQVIPAVRSAIFAAILQAKPALLEPYQKIFITVPQDMMGAVTREIQGRRGQIL-EMKTEG-DMVTIIAKAPVKEMFGFAGAIRGATSGKAI-------WSTEHAGFELVPQNLFQEFVMEVRKRKGLKLEMPKPEDF 725          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METMT (Elongation factor 2 OS=Methanococcoides methylutens GN=fusA PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.207e-29
Identity = 79/215 (36.74%), Postives = 115/215 (53.49%), Query Frame = 3
Query:   24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            G DKD AK+I     +    N   DM KG+Q+LNE  + V+ GF    K G L++E   G+  ++ D  LH DA+HRG  QVIP +R+ I A+ L A   L EP   V IQ P++ +GG    +  +RG + +      T +   KA  PV E FGF+  +R+AT G+A     F     +  +PL P +  +++V  IR+RKGLK  +    D+
Sbjct:  525 GLDKDEAKRI----ADIFESNAYFDMTKGIQHLNETMELVLEGFVEVMKAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQTPQEQMGGATKEIQGRRGIIIDMTSEGDTTIIESKA--PVSELFGFAGDIRSATEGRAMWSTEF-----VGFEPL-PTNMITEVVSGIRERKGLKKDLPQAQDF 727          
BLAST of DY258796 vs. ExPASy Swiss-Prot
Match: EF2_METBF (Elongation factor 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=fusA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.051e-28
Identity = 80/217 (36.87%), Postives = 116/217 (53.46%), Query Frame = 3
Query:   18 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKGQMTPLSDY 668
            + G +K+ AK I          N+ +DM KG+QYLNE  + ++ GF+   + G L  E +  +   + D  LH DAIHRG  QVIP +R+ I A  L A   LLEP   V +Q P+  +GG    L  +RG +   M   G  L  I+A +PV E FGF+  +R+AT G+A     F  +D++      P S  + +V  IR+RKGLK ++   SD+
Sbjct:  523 DLGMEKEEAKGI----VGIFNSNIFIDMTKGIQYLNETMELILDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQVIPASRQAIQAGMLMADDTLLEPYQKVFVQVPQLLMGGATKELQGRRG-IILNMSTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDIV------PTSIQNDIVGQIRERKGLKKELPKASDF 727          
The following BLAST results are available for this feature:
BLAST of DY258796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
EF2_METKA5.767e-3135.78Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]
EF2_METPE9.837e-3138.14Elongation factor 2 OS=Methanosphaerula palustris ... [more]
EF2_METS34.882e-3035.27Elongation factor 2 OS=Methanobrevibacter smithii ... [more]
EF2_METMA8.327e-3038.25Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_METBU2.423e-2936.74Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_METJA3.164e-2935.81Elongation factor 2 OS=Methanocaldococcus jannasch... [more]
EF2_METAC4.133e-2937.33Elongation factor 2 OS=Methanosarcina acetivorans ... [more]
EF2_ARCFU4.133e-2938.27Elongation factor 2 OS=Archaeoglobus fulgidus GN=f... [more]
EF2_METMT9.207e-2936.74Elongation factor 2 OS=Methanococcoides methyluten... [more]
EF2_METBF2.051e-2836.87Elongation factor 2 OS=Methanosarcina barkeri (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CA08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258796 ID=DY258796; Name=DY258796; organism=Citrus clementina; type=EST; length=835bp
CTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGATCTTGCCAAGAAA
ATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACATGGTTGTGGATAT
GTGCAAGGGAGTTCAGTACTTGAATGAAATTAAGGATTCAGTTGTTGCTG
GGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAAAACATGAGG
GGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCCGATGCTATCCA
CAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGTCATTTATGCAT
CCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCTACTTGGTGGAA
ATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGTGTTCTTAACCA
GAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGGTACCCCACTTT
ATAACATCAAGGCATACCTCCCGGTCGTTGAGTCTTTTGGATTTTCCAGC
ACTTTGAGAGCTGCAACCTCTGGACAGGCATTCCCTCAATGTGTGTTTGA
TCACTGGGACATGATGTCATCTGATCCATTGGAGCCGGGATCCCAGGCTT
CACAACTTGTTTTGGATATTAGGAAGAGGAAGGGTTTGAAAGGACAGATG
ACCCCCCTCTCTGATTATGAAAACAAGCTGTAAGCGCTTTTGCCATTATC
GATTGCTGGCCACTAGATTCATTTTTTTGCTGCCTTTGGTTTTGGTCCGT
TTTTTCCTTTGAAGGAAACAAGGTTAACTTTTTTGAATTTTGTTTTGGGA
ACCTCTGTTTTTTTAAATTGGGACCTCTCTATTTC
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