DY258800

Overview
NameDY258800
Unique NameDY258800
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1044
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.253e-15
Identity = 54/187 (28.88%), Postives = 92/187 (49.20%), Query Frame = 1
Query:   16 NNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 576
            NN  EY+ LV +  +   I  Q+ AF  GF+     + +Q+F  +EL+ LL G  E+ +     ++ ++  GY  + P I    E++ + T +++    QFVTG+ R+P GG A +     +     +  P T +            LP+  TC N LKLP Y +KEI+  +L+ A+  G   + ++
Sbjct:  735 NNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSGMPEI-DVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNL-----------LPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA 909          
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: SUDX_DROME (E3 ubiquitin-protein ligase Su(dx) OS=Drosophila melanogaster GN=Su(dx) PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.761e-15
Identity = 57/191 (29.84%), Postives = 87/191 (45.55%), Query Frame = 1
Query:    1 ENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561
            E V   N EEYI+L+ +  +  GI +Q + F  GFN+V  +  L+ F   EL+ +LCG +++    W+   +  H      Y   S  +V   + + E   +++    QFVTG  R+P GG A L               N            +  LP   TC N L LPPY + + + +KL +AI E +G
Sbjct:  773 ERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQRNTIYRH------YNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAEL------------MGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEG 945          
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.218e-15
Identity = 55/182 (30.22%), Postives = 82/182 (45.05%), Query Frame = 1
Query:   19 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRE-LWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561
            N  EY  L +D  +   I    E+FR GF  V +  S ++F   EL+ L+CG  E   + + L    ++  G+   SP +    EI+ E    QQR    FVTG+ R+P  G+  +  +++ +R                  S  D LP   TC N + L  Y  KE +  KL+ A+ E QG
Sbjct:  672 NKHEYFRLWMDFYLNRSIAPGFESFRNGFFHVIEGNSFRLFGSEELEQLVCGSNEQSLDVSMLRSVTRYQGGFDDNSPVVQWFWEILSEMEYPQQRKLLHFVTGSDRVPATGVTTIPFRISRIR------------------SGADRLPLSHTCFNEICLHEYKDKETLRNKLIIALEESQG 835          
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: NEDD4_HUMAN (E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens GN=NEDD4 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 1.061e-14
Identity = 57/181 (31.49%), Postives = 86/181 (47.51%), Query Frame = 1
Query:   19 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561
            N +EYI LV+       I +QM AF+ GF ++     ++IF  +EL+ L+CG  ++ +     EH K+ +GY+A    I    + +     +++    QFVTG  R+P  G A L         + S  P +    T       + LP   TC N L LPPY + E ++ KL  AI   QG
Sbjct: 1147 NKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDV-DVNDWREHTKYKNGYSANHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAEL---------YGSNGPQSF---TVEQWGTPEKLPRAHTCFNRLDLPPYESFEELWDKLQMAIENTQG 1314          
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: NED4L_PONAB (E3 ubiquitin-protein ligase NEDD4-like OS=Pongo abelii GN=NEDD4L PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.385e-14
Identity = 55/181 (30.39%), Postives = 84/181 (46.41%), Query Frame = 1
Query:   19 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561
            N  EYI LV+       + +QM AF  GF ++  I  ++IF  +EL+ L+CG  ++ +     +H  + +GY    P I    + +     +++    QFVTG  R+P  G A L         + S  P      T     + + LP   TC N L LPPY T E + +KL+ A+   QG
Sbjct:  787 NKREYIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCGLGDV-DVNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAEL---------YGSNGPQLF---TIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 954          
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: NED4L_MOUSE (E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus GN=Nedd4l PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.385e-14
Identity = 55/181 (30.39%), Postives = 84/181 (46.41%), Query Frame = 1
Query:   19 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561
            N  EYI LV+       + +QM AF  GF ++  I  ++IF  +EL+ L+CG  ++ +     +H  + +GY    P I    + +     +++    QFVTG  R+P  G A L         + S  P      T     + + LP   TC N L LPPY T E + +KL+ A+   QG
Sbjct:  832 NKREYIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCGLGDV-DVNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAEL---------YGSNGPQLF---TIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 999          
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: NED4L_HUMAN (E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens GN=NEDD4L PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.385e-14
Identity = 55/181 (30.39%), Postives = 84/181 (46.41%), Query Frame = 1
Query:   19 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561
            N  EYI LV+       + +QM AF  GF ++  I  ++IF  +EL+ L+CG  ++ +     +H  + +GY    P I    + +     +++    QFVTG  R+P  G A L         + S  P      T     + + LP   TC N L LPPY T E + +KL+ A+   QG
Sbjct:  803 NKREYIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCGLGDV-DVNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAEL---------YGSNGPQLF---TIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 970          
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: HUL5_YEAST (Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae GN=HUL5 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.385e-14
Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = 1
Query:   16 NNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 576
            +N+  Y++ V D  +     + + AF  G + +     +++F   EL  L+ G R+  +   L  + ++  GY  +   IV+  E++ EF  +++  F +FVT  P+ P  G   L+PK  I            + GT         LP+  TC N LKLP Y  K I+ +KL+YAI+ G   FDLS
Sbjct:  742 DNVLLYVTKVTDYKLNKRCFKPVSAFHGGLSVIIAPHWMEMFNSIELQMLISGERDNIDLDDLKSNTEYG-GYKEEDQTIVDFWEVLNEFKFEEKLNFLKFVTSVPQAPLQGFKALDPKFGI-----------RNAGTEKYR-----LPTASTCVNLLKLPDYRNKTILREKLLYAINSG-ARFDLS 910          
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.809e-14
Identity = 59/191 (30.89%), Postives = 83/191 (43.46%), Query Frame = 1
Query:    4 NVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 576
            +V   N  +YI  + D  +   I+    AF  G   +     L++F  HE + LL G     +   L  + K+  GY+  S  I    E+M  F P ++    +FVT   R P  G   L P   I +    T+   A  G        + LPS  TC N LKLP Y     M +KL+YAI+   G F+LS
Sbjct:  958 SVTNENKMQYIHAMADYKLNRQIVPFSNAFYRGLTDLISPAWLKLFNAHEFNQLLSGGNHDIDVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEPSERCLLLKFVTSCSRAPLLGFKYLQPTFIIHKVSCDTSLWAAIGGQDV-----ERLPSASTCYNTLKLPTYKRASTMREKLLYAITSNAG-FELS 1142          
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: NEDD4_MOUSE (E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus GN=Nedd4 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 2.363e-14
Identity = 56/181 (30.94%), Postives = 85/181 (46.96%), Query Frame = 1
Query:   19 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561
            N +EYI LV+       I +QM AF+ GF ++     ++IF  +EL+ L+CG  ++ +     EH K+ +GY+     I    + +     +++    QFVTG  R+P  G A L         + S  P +    T       D LP   TC N L LPPY + + ++ KL  AI   QG
Sbjct:  715 NKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDV-DVNDWREHTKYKNGYSMNHQVIHWFWKAVWMMDSEKRIRLLQFVTGTSRVPMNGFAEL---------YGSNGPQSF---TVEQWGTPDKLPRAHTCFNRLDLPPYESFDELWDKLQMAIENTQG 882          
The following BLAST results are available for this feature:
BLAST of DY258800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
HACE1_MOUSE1.253e-1528.88E3 ubiquitin-protein ligase HACE1 OS=Mus musculus ... [more]
SUDX_DROME4.761e-1529.84E3 ubiquitin-protein ligase Su(dx) OS=Drosophila m... [more]
HUL4_ASHGO6.218e-1530.22Probable E3 ubiquitin-protein ligase HUL4 OS=Ashby... [more]
NEDD4_HUMAN1.061e-1431.49E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens ... [more]
NED4L_PONAB1.385e-1430.39E3 ubiquitin-protein ligase NEDD4-like OS=Pongo ab... [more]
NED4L_MOUSE1.385e-1430.39E3 ubiquitin-protein ligase NEDD4-like OS=Mus musc... [more]
NED4L_HUMAN1.385e-1430.39E3 ubiquitin-protein ligase NEDD4-like OS=Homo sap... [more]
HUL5_YEAST1.385e-1429.95Probable E3 ubiquitin-protein ligase HUL5 OS=Sacch... [more]
UPL7_ARATH1.809e-1430.89E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis th... [more]
NEDD4_MOUSE2.363e-1430.94E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CB04FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258800 ID=DY258800; Name=DY258800; organism=Citrus clementina; type=EST; length=1044bp
GAAAATGTTGACATTAATAACTTGGAGGAATACATATCCTTGGTAGTTGA
TGCCACTGTCAAGACAGGCATCATGCGGCAAATGGAAGCTTTTAGAGCTG
GCTTCAATCAGGTCTTTGACATCACATCATTACAAATATTTACTCCTCAT
GAATTGGACCATCTGCTTTGTGGCCGTAGAGAGTTGTGGGAGCCTGCGGC
ACTTGCTGAGCATATAAAATTCGATCATGGATACACTGCCAAGAGTCCTG
CAATTGTTAACTTACTAGAGATCATGGGAGAATTCACACCAGATCAGCAG
CGTGCCTTCTGTCAGTTTGTTACTGGTGCACCTCGTCTTCCACCGGGTGG
GTTGGCGGTGCTGAATCCAAAGCTTACCATTGTCAGAAAGCATTCTTCAA
CTGCACCTAATACAGCATCAAACGGAACCGGGCCTTCGGAATCAGCGGAT
GACGACTTGCCAAGTGTCATGACTTGTGCCAATTACCTGAAGCTTCCTCC
TTACTCTACCAAGGAAATTATGTACAAGAAACTGGTTTATGCAATAAGCG
AAGGGCAGGGATCTTTTGATCTGTCATGAGTTCTCGAAACTAACCGATGG
ACCTTTGTATACTAATATTTGTGTCATCAAGTCAATTCTCTTACCTGGGG
ATTATTCATCTTTGAAAGTAGCATCATATTTCAGTCAAATAATGGCTGCT
TTTCACTGCCCTTGTATCAATGTTCACATCATTGGCAAGTTGATTTTTTT
TTTGTTTCAGGTCAGACTTCAGGCTGCCACAGTGCCCCACTCTCTCAACA
AAGATTTGAAGAGGGAAATTGTGGAGCAGTTTTTTGGCTGCTGCTAGGAC
TTTGGATATTAATAAGAAAACTTAAATTTTTTTTTTTGTCTTTTTTCCCC
TCATTGAACAATTTATTGCCTGCCGAAGTCCAACTAACCTTGTATGGCAT
AAAAATGAAGGGGAAGGAAAAAAAAAATTTGGTTAAATGGAATCCCCTTT
ATTTAAACCCCCAATTTCCTTTTCCATTTAAAATTCTTTTGAAT
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