DY258800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.693e-12 Identity = 55/185 (29.73%), Postives = 87/185 (47.03%), Query Frame = 1 Query: 7 VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561 V+ N +E++ VD + +AF AGF++V L +F P+EL ++ G ++ L ++ ++ Y A+ P I E+ E ++++ F F+TG+ R+P G+ L KL I TG ES LP TC N L LP Y+ KE + KL+ AI +G Sbjct: 888 VNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTN-YDWKELEKNTEYKGEYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSL--KLVI-------------QSTGGGESY---LPVSHTCFNLLDLPKYTEKETLRCKLIQAIDHNEG 1053
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.889e-12 Identity = 55/185 (29.73%), Postives = 86/185 (46.49%), Query Frame = 1 Query: 7 VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561 V+ N +E++ VD + +AF AGF++V L +F P+EL ++ G ++ L ++ ++ Y A P I E+ E ++++ F F+TG+ R+P G+ L KL I TG ES LP TC N L LP Y+ KE + KL+ AI +G Sbjct: 888 VNRQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTN-YDWKELEKNTEYKGEYWADHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSL--KLVI-------------QSTGGGESY---LPVSHTCFNLLDLPKYTEKETLRCKLIQAIDHNEG 1053
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 4.927e-12 Identity = 55/185 (29.73%), Postives = 84/185 (45.41%), Query Frame = 1 Query: 28 EYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLN-----PKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSF 567 EY+ LV D + + I Q+ AF G N++ + IF EL+ L+ G E+ + L + ++ YT SP I E++ F+ + F QFVTG ++P G L +L I + + S + LPS TC N L LP Y +KE + ++L+ AI E F Sbjct: 3489 EYVDLVADHILTSAIRPQINAFLEGLNELIPRELVSIFNDKELELLISGLPEI-DFDDLKANTEYT-SYTVGSPVIRWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGSP----------------ERLPSAHTCFNQLDLPEYQSKEQVQERLLLAIHEANEGF 3655
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: K0317_HUMAN (Protein KIAA0317 OS=Homo sapiens GN=KIAA0317 PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 4.927e-12 Identity = 48/181 (26.52%), Postives = 81/181 (44.75%), Query Frame = 1 Query: 31 YISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDL 573 Y++L+ + + + ++E F G N++ L IF +EL+ L+CG ++ A + + + + ++ T ++ QF TG+ +LPPGG A L P I+ P+ S LP+ TC N L LP Y + E +++ L AISEG F + Sbjct: 659 YLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGDISVSDFKAHAVVVGGSWHFREKVMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQII--------------AAPTHST---LPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGM 822
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: K0317_MOUSE (Protein KIAA0317 OS=Mus musculus GN=Kiaa0317 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 6.435e-12 Identity = 48/181 (26.52%), Postives = 81/181 (44.75%), Query Frame = 1 Query: 31 YISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDL 573 Y++L+ + + + ++E F G N++ L IF +EL+ L+CG ++ A + + + + ++ T ++ QF TG+ +LPPGG A L P I+ P+ S LP+ TC N L LP Y + E +++ L AISEG F + Sbjct: 659 YLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGDINVSDFKAHAVVVGGSWHFREKVMRWFWAVVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQII--------------AAPTHST---LPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGM 822
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 6.435e-12 Identity = 54/185 (29.19%), Postives = 85/185 (45.95%), Query Frame = 1 Query: 7 VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561 VD N +Y+S +D + E F+ GF +V + L+ F P EL + G + ++ ++ K++ GY P I + + T D+++ F F+TG RL G+ K+ IV + P T S + D P+ +TC N L LP YST E M + L AI+ +G Sbjct: 847 VDQTNKRDYVSKYIDYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPEELMTAIIGNTD-YDWKQFEQNSKYEQGYQKSHPTIQLFWKAFHKLTLDEKKKFLFFLTGRDRLHARGIQ----KMEIVFR----CPETFS---------ERDHPTSITCHNILSLPKYSTMERMEEALQVAINNNRG 1013
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.435e-12 Identity = 55/190 (28.95%), Postives = 89/190 (46.84%), Query Frame = 1 Query: 1 ENVDI--NNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL-WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561 +NV + +N +E++ V+ + + AF +GF +V L++F P EL ++ G WE L E + Y+A P + E EF ++++ F F+TG+ R+P G+A L + STA S ++ LP TC N L LP YS+KEI+ +L A+ +G Sbjct: 877 DNVTVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEE--LEETAIYKGDYSATHPTVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVI------QSTA------------SGEEYLPVAHTCYNLLDLPKYSSKEILSARLTQALDNYEG 1046
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: UBE3C_HUMAN (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 1.434e-11 Identity = 55/182 (30.22%), Postives = 78/182 (42.86%), Query Frame = 1 Query: 31 YISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 576 YI LV D + I + AFR G V + L++F E+ L+ G + L + GY+A P I ++ FT +++R +FVT R P G L P I NG E LP+ TC N LKLP + + ++ KL+YAI E F+LS Sbjct: 919 YIHLVADYRLNRQIRQHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPISLEDLKSFTNYSGGYSADHPVIKVFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCI------------HNGGSDLER----LPTASTCMNLLKLPEFYDETLLRSKLLYAI-ECAAGFELS 1083
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.872e-11 Identity = 53/187 (28.34%), Postives = 83/187 (44.39%), Query Frame = 1 Query: 19 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSF 567 N EY+ L+V+ + T + QM+AF GF+++ + IF EL+ L+ G ++ W+ A E+ H Y+A +P I + F ++ QFVTG ++P G L + R + + D LPS TC N L LP Y E + +L+ AI+ G F Sbjct: 3854 NKHEYVRLIVEHKLITSVKDQMKAFLTGFHEIIPEELIAIFNEQELELLISGLPDIDIDDWK--ANTEY----HNYSAGAPQIQWFWRAVRSFDKEELAKLLQFVTGTSKVPLNGFKELEGMNGVSRFNIHR-----------DYGSKDRLPSSHTCFNQLDLPEYENYETLRSQLLKAITAGSDYF 4023
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: NEDD4_DROME (E3 ubiquitin-protein ligase Nedd-4 OS=Drosophila melanogaster GN=Nedd4 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.445e-11 Identity = 53/192 (27.60%), Postives = 83/192 (43.23%), Query Frame = 1 Query: 4 NVDINN--LEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVL----NPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561 N+D+ N +EYI LV++ + QM +F GF + + ++IF HEL+ L+CG + + + E+ + Y I + F+ + + QFVTG R+P G L P++ + K + PN + P TC N L LPPY + KL+ AI QG Sbjct: 828 NIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLNLIKIFDEHELELLMCGIQNI-DVKDWRENTLYKGDYHMNHIIIQWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGT--PN--------------NFPRAHTCFNRLDLPPYEGYLQLKDKLIKAIEGSQG 1002 The following BLAST results are available for this feature:
BLAST of DY258800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258800 ID=DY258800; Name=DY258800; organism=Citrus clementina; type=EST; length=1044bpback to top |