DY258800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: UBE3C_MOUSE (Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ube3c PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 3.194e-11 Identity = 55/182 (30.22%), Postives = 77/182 (42.31%), Query Frame = 1 Query: 31 YISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 576 YI LV D + I AFR G V + L++F E+ L+ G + L + GY+A P I ++ FT +++R +FVT R P G L P I NG E LP+ TC N LKLP + + ++ KL+YAI E F+LS Sbjct: 919 YIHLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPVSLEDLKSFTNYSGGYSADHPVIKIFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCI------------HNGGSDLER----LPTASTCMNLLKLPEFYDEALLRSKLLYAI-ECAAGFELS 1083
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: SMUF2_XENLA (E3 ubiquitin-protein ligase SMURF2 OS=Xenopus laevis GN=smurf2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.171e-11 Identity = 52/187 (27.81%), Postives = 83/187 (44.39%), Query Frame = 1 Query: 25 EEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLN----PKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561 +EY+ L V+ GI Q A + GFN+V L+ F EL+ ++CG ++ W+ +H T S + + + F +++ QFVTG+ R+P G L P+L + + ++ N LP TC N + +PPY T E +Y+KL+ AI E G Sbjct: 582 KEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIICGLGKIDVSDWKSNTRLKHC------TTDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNN---------------LPKAHTCFNRIDIPPYETYEKLYEKLLTAIEETCG 747
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: SMUF2_HUMAN (E3 ubiquitin-protein ligase SMURF2 OS=Homo sapiens GN=SMURF2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.171e-11 Identity = 56/194 (28.87%), Postives = 88/194 (45.36%), Query Frame = 1 Query: 7 VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRA-FCQFVTGAPRLPPGGLAVLN----PKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561 V+ N +EY+ L V+ GI Q A + GFN+V L+ F EL+ ++CG ++ W+ +H D IV EF +++RA QFVTG+ R+P G L P+L + + ++ ++LP TC N + +PPY + E +Y+KL+ AI E G Sbjct: 573 VNEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVNTRLKHCTPDSN-------IVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQ---------------IDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEETCG 744
BLAST of DY258800 vs. ExPASy Swiss-Prot
Match: SMUF2_MOUSE (E3 ubiquitin-protein ligase SMURF2 OS=Mus musculus GN=Smurf2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.292e-11 Identity = 54/190 (28.42%), Postives = 86/190 (45.26%), Query Frame = 1 Query: 19 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRA-FCQFVTGAPRLPPGGLAVLN----PKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 561 N +EY+ L V+ GI Q A + GFN+V L+ F EL+ ++CG ++ W+ +H D +V EF +++RA QFVTG+ R+P G L P+L + + ++ ++LP TC N + +PPY + E +Y+KL+ AI E G Sbjct: 577 NKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVSDWKVNTRLKHCTPDSN-------VVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQ---------------IDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEETCG 744 The following BLAST results are available for this feature:
BLAST of DY258800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258800 ID=DY258800; Name=DY258800; organism=Citrus clementina; type=EST; length=1044bpback to top |