DY258812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.276e-17 Identity = 52/123 (42.28%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ AGGGA EI+ LR ++ I G+ Q I +A A+E IPR L +NAG D D+L KLR +HA YG+++ TG I D N V EP V AI +ATEAA +IL +D+ + Sbjct: 401 EDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHA---KGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVI 520
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.882e-17 Identity = 48/123 (39.02%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ +VAGGGA ++E+++ LR + + G+ Q + ++A ALE+IPR L +N+G D DVL +LR KH G+ G+D+ G + D V EP VK A+ +ATEAA +IL +D+ + Sbjct: 405 EDGKVVAGGGAPEVEVARQLRDFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKH--EDGQ-VTAGIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVI 524
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.882e-17 Identity = 51/127 (40.16%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 6 NSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 N LV GGGAI+ME+S +L + S +I G Q + A ALE IP+ L N G D + +LR KH EG + G++ N+G I D VWEP VK+ A E+AC++L +D+ V K Sbjct: 407 NPKLVPGGGAIEMEVSSHLEKISSSIEGLHQLPFRAVAYALEAIPKTLAQNCGVDVVRNITELRAKH---NQEGNKFIGIEGNSGKITDMGEANVWEPIAVKLQVYKTAIESACMLLRIDDVVSGLK 530
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.071e-17 Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ +VAGGGA ++EI+K L+ + +I+G+ Q ++++A+ALE++P+ L +NAG D+ DVL LR H E G+D+ G I D V EP VK AI +A EAA +IL +D+ + Sbjct: 396 EDGKVVAGGGAPEIEIAKRLKDYADSISGREQLAVSAFAEALEIVPKTLAENAGLDSIDVLVDLRAAHE----ESTYMGIDVFDGKIVDMKEAGVIEPHRVKKQAIQSAAEAAEMILRIDDVI 514
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.071e-17 Identity = 50/120 (41.67%), Postives = 71/120 (59.17%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGA-PYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 L GGGA +M +S L +++R+I G +Q+ + A A+E+IPR L N G + L +LR KHA EG +G+D TG + D VWEP VK+ +I A E+ACL+L VD+ V Sbjct: 405 LSPGGGATEMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKHA----EGQHSFGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIV 520
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.130e-16 Identity = 49/124 (39.52%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEG-APYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ +VAGGGA ++E++ +R + + G+ Q ++A ALEVIPR L +N+G D D+L +LR+ H EG YGVD+ +G +A V EP VK AI +ATE A +IL +D+ + Sbjct: 403 ESGKVVAGGGAPEIEVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHE----EGKTTYGVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDVI 522
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.516e-16 Identity = 48/127 (37.80%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 ++ ++AGGGA ++E+S L + ++ + GK Q I ++A+AL+VIPR L +NAG D + L K+ H +G G+D+ G AD V EP VK AI +A+EAA +IL +D+ + K Sbjct: 403 EDGKIIAGGGAAEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH---KEKGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAAQK 526
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.287e-16 Identity = 48/127 (37.80%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 ++ ++AGGGA ++E+S L + ++ + GK Q I ++A+AL+VIPR L +NAG D + L K+ H +G G+D+ G AD V EP VK AI +A+EAA +IL +D+ + K Sbjct: 403 EDGKIIAGGGASEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH---KEKGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.287e-16 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = 3 Query: 24 GGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 GGGA++ E++ L + + ++ G+ Q I ++AKALE+IPR L +NAG D + L KL+ +H GVD++ G+ D A V +P VK +A+ +A E A +IL +D+ + + K Sbjct: 407 GGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEHEKGR---ISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKK 523
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.287e-16 Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ ++ GGGA + E+S LR+ + ++ G+ Q + ++A+AL++IPR L +NAG D D L LR +H GE A G+D TG + D V EP VK AI +ATEAA +IL +D+ + Sbjct: 401 EDGKVLPGGGAPETELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRH--DGGEFAA-GLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVI 520 The following BLAST results are available for this feature:
BLAST of DY258812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258812 ID=DY258812; Name=DY258812; organism=Citrus clementina; type=EST; length=1269bpback to top |