DY258812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.606e-16 Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVD 362 LV GGGAI+M +S+ L ++S++I G Q + A++LE IP+ L N G + +L +LR KHA E YGVD + G I D +W+ VK+ + A E+AC +L VD Sbjct: 406 LVPGGGAIEMALSQALSEKSKSIEGLHQLPYKALAQSLECIPKILAQNCGANTVKLLTELRAKHATNPTENYTYGVDGDNGTIVDMKQLGIWDTHSVKVQTLKTAIESACTMLRVD 521
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 9.563e-16 Identity = 47/121 (38.84%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPY-GVDINTGGIADSFANF-VWEPAVVKINAINAATEAACLILSVDETV 371 +V GGGA+++E++ L++ +R + GK Q I +YA+ALE IP L ++AG DA + L KLR H+ +G + GV++ G I + V+EP +VK I +A+EAA IL +D+ + Sbjct: 409 IVGGGGAVEVELALKLKEFARTVGGKQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLHS----QGYKFAGVNVLEGKIEEDMTKINVYEPVLVKKQVIKSASEAAISILKIDDVI 525
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.249e-15 Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ ++ GGGA + E++ LR + ++ G+ Q + ++A ALEVIPR L +NAG D D L LR +H G G+D G + D + + EP VK AI +ATEAA +IL +D+ + Sbjct: 400 EDGQVMPGGGAPETELAMQLRDFADSVGGREQLAVEAFADALEVIPRTLAENAGHDPIDSLVDLRSQH---DGGDTEAGLDAYNGDVIDMESEGIVEPLRVKTQAIESATEAATMILRIDDVI 519
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.249e-15 Identity = 46/119 (38.66%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++AGGGAI++E++ LR + +++G+ Q + +YA ALE++PR L +NAG D+ D L LR H G+ G+++ TG + D+F V E A K A+ +A+EAA L+L +D+ + Sbjct: 408 VLAGGGAIEVELASRLRNYADSVSGREQLAVEAYADALELVPRVLAENAGLDSIDTLVDLRAAH--EDGQ-VRAGLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDII 523
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.631e-15 Identity = 49/124 (39.52%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGA-PYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 LV GGGA +M ++ L ++S+ + G Q+ + A+ALEVIPR L N G +L LR KH T EG +GVD G +AD +WEP VK+ A E A L+L +D+ V K Sbjct: 406 LVPGGGASEMSVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRILTSLRAKH---TQEGCQTWGVDGEAGVLADMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIVSGHK 526
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 2.130e-15 Identity = 43/123 (34.96%), Postives = 73/123 (59.35%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K L+AGGGA ++E++ L + SR ++G + + ++A A+EVIP L +NAG + + +LR +HA GE G+++ GGI++ V +P +V ++A+ ATE IL +D+ V Sbjct: 417 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHA--QGEKTT-GINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 2.130e-15 Identity = 43/123 (34.96%), Postives = 73/123 (59.35%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K L+AGGGA ++E++ L + SR ++G + + ++A A+EVIP L +NAG + + +LR +HA GE G+++ GGI++ V +P +V ++A+ ATE IL +D+ V Sbjct: 417 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHA--QGEKTA-GINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV 536
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 2.130e-15 Identity = 43/123 (34.96%), Postives = 73/123 (59.35%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K L+AGGGA ++E++ L + SR ++G + + ++A A+EVIP L +NAG + + +LR +HA GE G+++ GGI++ V +P +V ++A+ ATE IL +D+ V Sbjct: 417 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHA--QGEKTT-GINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 83.9593 bits (206), Expect = 2.130e-15 Identity = 43/123 (34.96%), Postives = 73/123 (59.35%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K L+AGGGA ++E++ L + SR ++G + + ++A A+EVIP L +NAG + + +LR +HA GE G+++ GGI++ V +P +V ++A+ ATE IL +D+ V Sbjct: 417 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHA--QGEKTA-GINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV 536
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.782e-15 Identity = 44/121 (36.36%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDE 365 K L+AGGGA ++E+S+ L E+ ++G QF +A+ALEVIP L +NAG ++ +V+ LR +HA GE G+ + G ++++ V +P +V +AI A+E IL +D+ Sbjct: 411 KEKALIAGGGAPEIEVSRVLMSEANKLSGVEQFVYQEFAQALEVIPTTLAENAGLNSINVVTDLRNRHA--NGE-KNAGISVRRSGASNTYDEHVLQPVLVSSSAITLASECVKSILRIDD 528 The following BLAST results are available for this feature:
BLAST of DY258812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258812 ID=DY258812; Name=DY258812; organism=Citrus clementina; type=EST; length=1269bpback to top |