DY258812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 3.634e-15 Identity = 41/119 (34.45%), Postives = 74/119 (62.18%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ GGGA ++E++ LR + +++G+ Q + ++A +LE++PR L +NAG D+ D L LR H + G+++ +G + D+F V EPA K A+ +A+EAA L+L +D+ + Sbjct: 409 VLPGGGATEVEVASRLRDFADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLRSAH--ENDDDEHIGLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDII 525
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.634e-15 Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K L+AGGGA ++E++ L + SR + G + + +Y+ ALEVIP L +NAG + + +LR +HA G+ G+++ GGI++ V +P +V I+A+ ATE IL +D+ V Sbjct: 414 KKRALIAGGGAPEIELAVRLAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRHA--QGDKMA-GINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVV 533
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 3.634e-15 Identity = 44/123 (35.77%), Postives = 73/123 (59.35%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K L+AGGGA ++E++ L + SR ++G + I ++A A+EVIP L +NAG + + +LR +HA GE G+++ GGI++ V +P +V ++A+ ATE IL +D+ V Sbjct: 420 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHA--QGEKTT-GINVRKGGISNILEEQVVQPLLVSVSALTLATETVRSILKIDDVV 539
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 4.746e-15 Identity = 46/120 (38.33%), Postives = 70/120 (58.33%), Query Frame = 3 Query: 12 TLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 +L GGGA +M +S L ++++ + G Q+ + A A+E IPR L NAG D +L++LR KHA G+D + G I D + +WEP V+K ++ A E+ACL+L VD+ V Sbjct: 411 SLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHA---QGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIV 527
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.746e-15 Identity = 47/123 (38.21%), Postives = 67/123 (54.47%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 LV GGGA +M ++ L ++S+A+ G Q+ + A+ALEVIPR L N G +L LR KH + E +GV+ TG + D +WEP VK+ A E A L+L +D+ V K Sbjct: 407 LVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQESCE--TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHK 527
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.198e-15 Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 LV GGGA +M ++ L ++S+A+ G Q+ + A+ALEVIPR L N G +L LR KH E +GV+ TG + D +WEP VK+ A E A L+L +D+ V K Sbjct: 407 LVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCE--TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHK 527
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.198e-15 Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 LV GGGA +M ++ L ++S+A+ G Q+ + A+ALEVIPR L N G +L LR KH E +GV+ TG + D +WEP VK+ A E A L+L +D+ V K Sbjct: 407 LVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCE--TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHK 527
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 82.4185 bits (202), Expect = 6.198e-15 Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 LV GGGA +M ++ L ++S+A+ G Q+ + A+ALEVIPR L N G +L LR KH E +GV+ TG + D +WEP VK+ A E A L+L +D+ V K Sbjct: 407 LVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCE--TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHK 527
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.198e-15 Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 LV GGGA +M ++ L ++S+A+ G Q+ + A+ALEVIPR L N G +L LR KH E +GV+ TG + D +WEP VK+ A E A L+L +D+ V K Sbjct: 407 LVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCE--TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHK 527
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 6.198e-15 Identity = 45/132 (34.09%), Postives = 78/132 (59.09%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHA----LPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 ++ LVAGGGA++ +S +L ++ ++ + Q + +A AL +IP+ L NA D+TD++ KLR H+ +P + + G+D+ G I D+ + EPA+ K+ ++ ATEAA IL +D+ +K K Sbjct: 407 ESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIKLDK 538 The following BLAST results are available for this feature:
BLAST of DY258812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258812 ID=DY258812; Name=DY258812; organism=Citrus clementina; type=EST; length=1269bpback to top |