DY258812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.018e-14 Identity = 41/121 (33.88%), Postives = 71/121 (58.68%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDE 365 K L+AGGGA ++E+S+ + S+ + G + + + +YA+ALE+IP L +NAG ++ +LR KHA GE G+++ G I + V +P +V +A+ ATE ++L +D+ Sbjct: 411 KKKFLIAGGGAPEIEVSQQVTAFSKTLTGITSYCVRAYAEALEIIPYTLAENAGLHPISIVTELRNKHA--QGE-INSGINVRKGAITNILQENVVQPLLVSTSALTLATETVVMLLKIDD 528
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.018e-14 Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDE 365 K L+AGGGA ++EIS+ L +ESR++ G + +A+ALEVIP L +NAG ++ V+ +LR +H G+ + G +++ + +P +V +AI A+E IL +D+ Sbjct: 407 KERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQEFAQALEVIPTTLAENAGLNSIKVITELRSRH---ENGDVNEGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDD 524
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.018e-14 Identity = 45/133 (33.83%), Postives = 78/133 (58.65%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHAL----PTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK-NPK 383 ++ T+V GGGA++ +S YL + + + Q I+ +A++L V+P+QL NA DA+D+++KL+ H P+ + Y G+D+ + ++ V EPA+ KI I ATE+A IL +D+ + NP+ Sbjct: 404 ESGTIVPGGGAVESALSIYLDNIAATMGSRKQLAISEFAESLLVVPKQLAVNAALDASDLVSKLKAYHHAAQTDPSKKSYAYSGLDLFNNKVRNNLEAGVLEPAIAKIKCIKFATESAITILRIDDKITLNPR 536
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.247e-14 Identity = 42/117 (35.90%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLIL 353 ++ ++ GGGA ++E++K++R+ + + GK Q I ++AKALE + L +NAG D D++ KLR H +G +D+ TG + + V EP + NAI A TEAA +I+ Sbjct: 387 RDGKVIPGGGAAEIELAKHIRRLATRVGGKEQLAIEAFAKALEGLAVTLVENAGLDPIDMVMKLRAAH--EREDGKYLSIDLATGDLVNMREKGVIEPVSILANAIKAGTEAATIIM 501
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.247e-14 Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEG-----APYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 +++T+VAGGGA++ +S YL + + + Q I +A AL +IP+ L NA DAT+++ KLR H + + G+D+ G I ++ V EPA+ K+ I ATEAA IL +D+ +K Sbjct: 407 ESNTVVAGGGAVESALSVYLEHLATTLGSREQLAIAEFADALLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSSMGLDLVNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIK 535
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 6.853e-14 Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANF-VWEPAVVKINAINAATEAACLILSVDETV 371 +VAGGGA++ E++ LR+ +R++ GK Q I +A+ALE IP L + AG + L LR +HA G+D G IAD V EP VK + +A EAA IL +D+ V Sbjct: 413 IVAGGGAVESELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQALMDLRARHAKGLVNS---GIDAVNGKIADDMMKINVIEPVRVKSQVLKSAVEAATAILKIDDLV 529
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.853e-14 Identity = 46/131 (35.11%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAP-------YGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK-NPK 383 +V GGGA+++ +S L +R + K Q + + +AL +IP+ L NA DAT++++KLR HA P G+D++ G + ++ V EP V KI ++ ATEAA IL +D+ +K NP+ Sbjct: 408 VVPGGGAVEIALSIKLEDFARTLGTKEQTAVAEFCEALNIIPKVLAANAAQDATELVSKLRALHAASQSSDDPAKKELKNCGLDLSLGKVRNNVKAGVLEPMVSKIKSLRFATEAAITILRIDDMIKLNPQ 538
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.950e-14 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 ++ +VA GGA ++E++ L + ++ + GK Q I ++A+AL+VIPR L +NAG D + L K+ H +G GVD+ G AD V P V AI +A+EAA +IL +D+ + K Sbjct: 403 EDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH---KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.169e-13 Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALP------TGEGA----PYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 L+ GGGA +M +S LR+ + G Q + A+EVIPR L N G + +LR KHA +G G +G+D TG + D VWEP VK+ I A E+AC+IL +D+ V K Sbjct: 422 LLPGGGATEMAVSVGLRKAGLKLEGIQQGPFLAVGDAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYEDSETSGNGTFPKCNWGIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIVSGSK 554
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.994e-13 Identity = 44/129 (34.11%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ ++V GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D++ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532 The following BLAST results are available for this feature:
BLAST of DY258812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258812 ID=DY258812; Name=DY258812; organism=Citrus clementina; type=EST; length=1269bpback to top |