DY258812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_HUMAN (T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.994e-13 Identity = 44/129 (34.11%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ ++V GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D++ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 2.604e-13 Identity = 40/121 (33.06%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDE 365 K L+AGGG+ ++E ++ L + +R + G+ I ++++ALE+IP L +NAG +A V+ +LR +HA GE G+++ G + + V +P +V I+AI A E +I+ +D+ Sbjct: 405 KQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHA--NGEKTA-GINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDD 522
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.401e-13 Identity = 44/129 (34.11%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ ++V GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLPVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.442e-13 Identity = 40/123 (32.52%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ ++ GGA ++E++ L + ++ + GK I ++A AL++IP+ L +NAG D ++L K+ +H G G+D+ G AD + EP VK AI +A+EAA +IL +D+ + Sbjct: 403 EDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH---KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.442e-13 Identity = 40/123 (32.52%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ ++ GGA ++E++ L + ++ + GK I ++A AL++IP+ L +NAG D ++L K+ +H G G+D+ G AD + EP VK AI +A+EAA +IL +D+ + Sbjct: 403 EDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH---KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPQ_CANAL (T-complex protein 1 subunit theta OS=Candida albicans GN=CCT8 PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 4.442e-13 Identity = 46/123 (37.40%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K++ L+ G GA+++E+ K + ++ G Q I S+AKA EVIPR L + +G D++++L+KL HA TG A G+DI++G +AD+ V + K +AI+ A +A ILS+D+ + Sbjct: 401 KDNRLLPGAGAVEIELMKRITAY-QSTPGLLQLAIKSFAKAFEVIPRVLAETSGHDSSEILSKLHAAHAEDTGLRA--GIDIDSGEVADT---AVLDILATKKSAIDLAVDATNTILSIDQII 517
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.442e-13 Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAP-------YGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ +V G GA + +S YL + ++ + Q I +A+A+ IP+QL NAG D+T+++ +LR H + + P +G+D+N +AD V+EP V KI ++ ATEAA IL +D+ +K Sbjct: 401 ESKRIVPGAGACETAVSIYLENYALTLSSREQLAIAEFARAMLSIPKQLAVNAGVDSTELVARLRSCH--NSSQSKPDQAHNKWWGLDLNNQYVADCKEIGVFEPLVSKIKSLKFATEAAITILRIDDLIK 529
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.801e-13 Identity = 44/129 (34.11%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ ++V GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLINGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.577e-13 Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 ++ ++ GGA ++E++ L + ++ + GK Q I ++A+AL+VIPR L +NAG D + L K+ H +G GVD+ G AD V P V AI +A+EAA +IL +D+ + K Sbjct: 403 EDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAH---KEKGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPQ_SCHPO (Probable T-complex protein 1 subunit theta OS=Schizosaccharomyces pombe GN=cct8 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 7.577e-13 Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K++ L+ G GA DM++ L G Q I Y +A EV+PR + +NAG D TDV++KL H GE V+ G D+ +++ + K +AI ATE +L+VD+ V Sbjct: 404 KDNRLIFGAGASDMQLCIRLISVGEKTPGIYQHAIKQYGEAFEVVPRTISENAGLDPTDVISKLYAAHHKENGESIGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTVLNVDQVV 526 The following BLAST results are available for this feature:
BLAST of DY258812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258812 ID=DY258812; Name=DY258812; organism=Citrus clementina; type=EST; length=1269bpback to top |