DY258812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 7.577e-13 Identity = 43/124 (34.68%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 K S VAG GA ++ +S + E++ +AGK + ++ +AL +P +CDNAG D+ +++ +LR +HA G+DI G +AD V E VK+ +++A EA IL VD+ +K Sbjct: 396 KESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHA---NGRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIK 516
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.577e-13 Identity = 43/129 (33.33%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ ++V GGGA++ +S YL + ++ + Q I +A++L +IP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLIIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNRQTGVFEPTMVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 9.896e-13 Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANF-VWEPAVVKINAINAATEAACLILSVDETV 371 +VAGGGA++ E++K LR ++R + GK Q N++A ALE L + AG D L ++R KHA G+D+ I D+ V + VK + +ATEAA IL +D+ + Sbjct: 400 IVAGGGAVEEELAKRLRDDARKVIGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKHATGLKNA---GIDVTKARIYDNMLELRVIDSLKVKEQVLKSATEAATAILKIDDMI 516
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 9.896e-13 Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAP---------YGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ +V GGGA++ +S YL + ++ + Q I +A+AL +IPR L NA D+T++ KLR HA YG+D+ G I D+ V EP++ K+ ++ +A EA IL +D ++K Sbjct: 409 ESGKVVPGGGAVETALSIYLENFATSLGSREQLAIAEFAQALLIIPRTLAVNAAKDSTELTAKLRAYHAASQNAEVTDVKKRGYKNYGLDLLNGVIRDNVKAGVLEPSMSKLKSLKSAVEACIAILRIDTSIK 541
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 9.896e-13 Identity = 44/129 (34.11%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ ++V GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 9.896e-13 Identity = 44/129 (34.11%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ ++V GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_ENCCU (T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi GN=TCP1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.292e-12 Identity = 42/129 (32.56%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKL--RQKHALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 380 +++++V GGGA++ +S L + + + K I+ YA++L IP+ L NAG D+ +++ L Q + G+ + G+D+ +G I D+F + EP+V K+ ++ AATEAA IL ++E + P Sbjct: 406 ESNSVVPGGGAVECALSLMLEKFAFTVNSKEHVAIHRYAESLLSIPKILSTNAGLDSNELVANLLSSQSREMANSSGSKFLGIDVTSGKIQDNFEFGIIEPSVNKMKSLKAATEAAISILRINEVIILP 534
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.688e-12 Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K L+ GGGA +MEI+ LR ++ G +Q+ ++A ALE+IP L +NAG + +LR HA + YGV++ G + D V +P +V +AI A+E IL +D+ V Sbjct: 417 KKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNHA---NGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.688e-12 Identity = 44/129 (34.11%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ ++V GGGA++ +S YL + ++ + Q I +A++L +IP L NA DATD++ KLR H P + + G+D+ G D+ V+EP +VK ++ ATEAA IL +D+ +K Sbjct: 407 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLIIPNTLAVNAAQDATDLVAKLRAFHNEAQVNPERKNLKWIGLDLINGKPRDNKQAGVFEPTLVKTKSLKFATEAAITILRIDDLIK 535
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 1.688e-12 Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 12 TLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++V GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 407 SVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532 The following BLAST results are available for this feature:
BLAST of DY258812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258812 ID=DY258812; Name=DY258812; organism=Citrus clementina; type=EST; length=1269bpback to top |