DY258812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.205e-12 Identity = 43/126 (34.13%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQK--HALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 K + V GGG +M +SK + E++ I GK + ++A+AL +P L DNAGFD++++++KLR + + T G+D+N G IAD + E +K +++A+EAA ++L VD ++ Sbjct: 396 KETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTS-----GLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIR 516
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPA_AMBME (T-complex protein 1 subunit alpha (Fragment) OS=Ambystoma mexicanum PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.760e-12 Identity = 43/129 (33.33%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ ++V GGGA++ +S YL + ++ + Q I +A++L VIP+ L N D+TD++ KLR H P + + G+D+ G D+ V+EP +VK ++ ATEAA IL +D+ +K Sbjct: 22 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPKTLAVNRAQDSTDLVAKLRAFHNEAQVNPDRKNLKWIGLDLVNGKARDNKQAGVFEPTMVKTKSLKFATEAAITILRIDDLIK 150
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.429e-11 Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDI-NTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 +V G GA ++ I+ +R E+ I G+ Q + +YA A+E +PR L +N G D D L LR ++ EG + +G I D V +P VK AI +ATEAA +I+ +D+ + Sbjct: 405 VVPGAGATEIAIADRIRSEAAGIEGRKQLAVEAYADAVEALPRTLAENTGMDPIDALVDLRARYET---EGLAGIISSGRSGEIGDPVELGVIDPVAVKREAIESATEAATMIVRIDDVI 521
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.866e-11 Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = 3 Query: 15 LVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANF-VWEPAVVKINAINAATEAACLILSVDETV 371 +VAGGGA++ E++K LR+ + + GK Q N++A ALE L + AG D L ++R KHA G+DI I D+ V + VK + +ATEAA IL +D+ + Sbjct: 400 IVAGGGAVEEELAKRLRENAGKVPGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKHANGLKNA---GIDIVKARIYDNMLELKVIDSLKVKEQVLKSATEAATAILKIDDMI 516
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.866e-11 Identity = 40/123 (32.52%), Postives = 67/123 (54.47%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K +AGGGA ++E++ L ++ + G + ++A ALEVIP L +NAG + + +LR +HA GE G+++ G I D A V +P +V ++I A+E IL +D+ + Sbjct: 410 KKRAQIAGGGAPEIEMAIQLAAHAQTLEGVDAYCFRAFANALEVIPSTLAENAGLNPIATVTELRNRHA--QGE-KNAGINVRKGAITDILAENVVQPLLVSTSSITLASETVRSILKIDDII 529
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 2.437e-11 Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEG-APYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 K+S V GGG +M ++ + Q + GK + SYAKAL ++P + DNAG+D+ D++ +LR H+ EG G+D+ G I D + E VK + +A EAA +IL VD +K Sbjct: 402 KDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHS----EGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIK 522
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 70.4774 bits (171), Expect = 2.437e-11 Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEG-APYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 K+S V GGG +M ++ + Q + GK + SYAKAL ++P + DNAG+D+ D++ +LR H+ EG G+D+ G I D + E VK + +A EAA +IL VD +K Sbjct: 402 KDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHS----EGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIK 522
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 2.437e-11 Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEG-APYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 K+S V GGG +M ++ + Q + GK + SYAKAL ++P + DNAG+D+ D++ +LR H+ EG G+D+ G I D + E VK + +A EAA +IL VD +K Sbjct: 402 KDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHS----EGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIK 522
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: TCPQ_CAEEL (T-complex protein 1 subunit theta OS=Caenorhabditis elegans GN=Y55F3AR.3 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.183e-11 Identity = 40/123 (32.52%), Postives = 64/123 (52.03%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K+ L+AG GA+++E++K + G Q+ I +A ALE +P+ + +NAG T+ L KL +H G+DI D+ N +++ K AI AT+AA IL VD+ + Sbjct: 437 KDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTETLTKLYAEHVAGKKNA---GIDIWKRETMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQII 556
BLAST of DY258812 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.158e-11 Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 3 KNSTLVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 ++ +VA GGA ++E++ + + ++ + GK Q I ++A+AL+VIPR L NAG D + L K+ H +G GVD+ G AD V P V AI +A +AA +IL +D+ + K Sbjct: 403 EDGKIVAAGGAPEIELAISVDEYAKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAH---KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSA-KAAIMILRIDDVIAASK 525 The following BLAST results are available for this feature:
BLAST of DY258812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258812 ID=DY258812; Name=DY258812; organism=Citrus clementina; type=EST; length=1269bpback to top |