DY258826

Overview
NameDY258826
Unique NameDY258826
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1215
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1258 contig Ccv1_Contig1258:1..1215. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_HUMAN (Aspartate aminotransferase, cytoplasmic OS=Homo sapiens GN=GOT1 PE=1 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 7.894e-44
Identity = 95/206 (46.12%), Postives = 128/206 (62.14%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++  P+VL VVKK E  +  +   N EYLPI GLA F    + L  G D+  LKE+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLDL+G + D++ AP  S ++LH  AHNPTGIDPTPE+W++IA
Sbjct:    5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIA 210          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_PONAB (Aspartate aminotransferase, cytoplasmic OS=Pongo abelii GN=GOT1 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.759e-43
Identity = 94/206 (45.63%), Postives = 128/206 (62.14%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++  P+VL VVKK E  +  +   N EYLPI GLA F    + L  G D+  LKE+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLDL+G++ D++ AP  S ++LH  AHNPTG DPTPE+W++IA
Sbjct:    5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGLLNDLENAPEFSIVVLHACAHNPTGTDPTPEQWKQIA 210          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_MACFA (Aspartate aminotransferase, cytoplasmic OS=Macaca fascicularis GN=GOT1 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.759e-43
Identity = 95/206 (46.12%), Postives = 127/206 (61.65%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++  P+VL VVKK E  +  +   N EYLPI GLA F    + L  G D+  LKE+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLDL+G + D++ AP  S I+LH  AHNPTG DPTPE+W++IA
Sbjct:    5 SVFSEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIIVLHACAHNPTGTDPTPEQWKQIA 210          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_HORSE (Aspartate aminotransferase, cytoplasmic OS=Equus caballus GN=GOT1 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 3.453e-43
Identity = 92/206 (44.66%), Postives = 124/206 (60.19%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +      N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       Y Y+D    GLDL+G + D++ AP  S  +LH  AHNPTG DPTPE+W++IA
Sbjct:    5 SIFVEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQKIANNSSLNHEYLPILGLAEFRSCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLSRWYNGTNNKNTPVYVSSPTWENHNGVFSGAGFKDIRSYHYWDATKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIA 210          

HSP 2 Score: 23.8682 bits (50), Expect = 3.453e-43
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 3
Query:  792 KRKIIFPFSDVAHQV*FPGNQEK 860
            KR+ +FPF D A+Q    GN ++
Sbjct:  214 KRRFLFPFFDSAYQGFASGNLDR 236          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_RAT (Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus GN=Got1 PE=1 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 7.640e-43
Identity = 92/206 (44.66%), Postives = 127/206 (61.65%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  APP  +  +   F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +  +   N EYLPI GLA F    ++L+ G ++  L+E RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLDL+G + D++ AP  S  +LH  AHNPTG DPT E+W++IA
Sbjct:    5 SFFAQVPQAPPVLVFKLIADFRDDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQKIANDHSLNHEYLPILGLAEFRSCASQLVLGDNSPALRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPVYVSSPTWENHNGVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTEEEWKQIA 210          

HSP 2 Score: 24.2534 bits (51), Expect = 7.640e-43
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3
Query:  792 KRKIIFPFSDVAHQV*FPGNQEK 860
            KR+ +FPF D A+Q    G+ EK
Sbjct:  214 KRRFLFPFFDSAYQGFASGDLEK 236          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_BOVIN (Aspartate aminotransferase, cytoplasmic OS=Bos taurus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 4.873e-42
Identity = 92/206 (44.66%), Postives = 123/206 (59.71%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +      N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F  A       Y Y+D    GLDL+G + D++ AP  S  +LH  AHNPTG DPTPE+W++IA
Sbjct:    5 SIFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQRIANDSSINHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQCLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFIAAGFKDIRSYHYWDAAKRGLDLQGFLNDLEKAPEFSIFVLHACAHNPTGTDPTPEQWKQIA 210          

HSP 2 Score: 24.2534 bits (51), Expect = 4.873e-42
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3
Query:  792 KRKIIFPFSDVAHQV*FPGNQEK 860
            KR+ +FPF D A+Q    G+ EK
Sbjct:  214 KRRFLFPFFDSAYQGFASGSLEK 236          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_MOUSE (Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 9.650e-42
Identity = 91/206 (44.17%), Postives = 127/206 (61.65%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  APP  +  ++  F+ D D +K+NLGVGAYRT+E QP+VL VV+K E  +  +   N EYLPI GLA F    + L+ G ++  ++E RV  VQ L GTG+LR+ A  + R++ G       + +SSPTW NH  +F+ A       Y Y+D +  GLDL+G + D++ AP  S  +LH  AHNPTG DPTPE+W++IA
Sbjct:    5 SVFAQVPQAPPVLVFKLTADFRDDPDPRKVNLGVGAYRTDESQPWVLPVVRKVEQKIANDNSLNHEYLPILGLAEFRSCASRLVLGDNSPAIRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPIYVSSPTWENHNAVFSAAGFKDIRPYCYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIA 210          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_SCHPO (Aspartate aminotransferase, cytoplasmic OS=Schizosaccharomyces pombe GN=aat2 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 3.667e-41
Identity = 90/200 (45.00%), Postives = 122/200 (61.00%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF---PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKI 777
            F  +  A  D I  ++  +  D D KK+N+ VGAYR +  +P++L  VKKA  ++ E+   N EYLPI GL  F K  AE+LF  +  +L E RVA++Q +SGTG+  LAA+ IE ++    GA V IS+PTW  H+ ++    V    Y Y+D K    D EGM++ IK+AP GS  LLH  AHNPTGIDPT E+W  I
Sbjct:    6 FANIEEAKADAIFKLNAQYHQDEDPKKVNMSVGAYRDDTGKPWILPAVKKASKIVEEQASFNHEYLPIAGLPRFTKAAAEVLFRPNPHLLSEDRVASMQSVSGTGANFLAASFIETFYVKHTGAHVYISNPTWPVHRTLWEKLGVTVDTYPYWDAKNRSFDYEGMLSTIKSAPEGSIFLLHACAHNPTGIDPTREQWLSI 205          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_YEAST (Aspartate aminotransferase, cytoplasmic OS=Saccharomyces cerevisiae GN=AAT2 PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 3.104e-40
Identity = 84/222 (37.84%), Postives = 127/222 (57.21%), Query Frame = 1
Query:  175 VNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPMLPTRY 837
            ++ + F  + + PPD + G+ + +  D    K++LG+GAYR +  +P+VL  VK AE L+  +   N EYL I GL +     A+++FG  +   +E RV +VQ LSGTG+L ++A    ++FP   V +S PTW NH  IF +  +  + Y Y+  +T  LDL G +  I+ AP GS  +LH  AHNPTG+DPT E+W +I        S +H  +  T Y
Sbjct:    1 MSATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAFQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIV---DAIASKNHIALFDTAY 219          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_CAEEL (Probable aspartate aminotransferase, cytoplasmic OS=Caenorhabditis elegans GN=T01C8.5 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.956e-38
Identity = 83/202 (41.09%), Postives = 125/202 (61.88%), Query Frame = 1
Query:  181 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAE-NLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR-VPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            +S F+G+ +APP  +   ++ +  +T   K+NL +GAYRTEE QP+VL VV + E  +  +   N EYLP+ G   F K   EL+ GA++  +KE+R   VQ LSGTG+LR  A  +        V +S+PTWGNHK +F  A     ++Y ++D     + +E  ++D+++AP  S I+LHG AHNPTG+DPT E+W+ +A
Sbjct:    1 MSFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIANDTSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLASVCNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVA 202          
The following BLAST results are available for this feature:
BLAST of DY258826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
AATC_HUMAN7.894e-4446.12Aspartate aminotransferase, cytoplasmic OS=Homo sa... [more]
AATC_PONAB1.759e-4345.63Aspartate aminotransferase, cytoplasmic OS=Pongo a... [more]
AATC_MACFA1.759e-4346.12Aspartate aminotransferase, cytoplasmic OS=Macaca ... [more]
AATC_HORSE3.453e-4344.66Aspartate aminotransferase, cytoplasmic OS=Equus c... [more]
AATC_RAT7.640e-4344.66Aspartate aminotransferase, cytoplasmic OS=Rattus ... [more]
AATC_BOVIN4.873e-4244.66Aspartate aminotransferase, cytoplasmic OS=Bos tau... [more]
AATC_MOUSE9.650e-4244.17Aspartate aminotransferase, cytoplasmic OS=Mus mus... [more]
AATC_SCHPO3.667e-4145.00Aspartate aminotransferase, cytoplasmic OS=Schizos... [more]
AATC_YEAST3.104e-4037.84Aspartate aminotransferase, cytoplasmic OS=Sacchar... [more]
AATC_CAEEL4.956e-3841.09Probable aspartate aminotransferase, cytoplasmic O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258826 ID=DY258826; Name=DY258826; organism=Citrus clementina; type=EST; length=1215bp
CGTAAAATCACATTTATGGCCTCAACAATGCTTTCAATAGCTTCTGCAAC
TCCTTCAGCTTCGCTATCGATGCACGAGAAGCTCAAGGGCAAGGTTAAGC
TTGGAAGTACCACTAATTCGACAGCAGGATTCATTAAGACTAAATCCTTT
GGTCGAGTATCTATGGTTGCTGCTGTCAATGTTTCTCGTTTTGAGGGTGT
AACGATGGCTCCCCCCGATCCAATTCTTGGAGTTTCTGAAGCTTTTAAAG
CTGACACAGATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACC
GAAGAGCTACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCT
TATGCTGGAAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGG
CTGCATTCAATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCA
GTGCTAAAGGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGG
TTCTCTTCGGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAA
AAGTACTAATATCATCTCCAACATGGGGTAACCACAAGAACATTTTCAAT
GATGCTAGAGTTCCATGGTCTGAATACCGCTACTATGATCCAAAAACAGC
GGGTTTGGATTTAGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGAG
GATCTTTTATTCTGCTTCATGGTTGGGCTCACAACCCAACTGGCATTGAT
CCAACCCCTGAAAAATGGGAAAAAATTGCTTGAGGCCATCCAAAAGAAAA
ATCATATTCCCATTTTCCGATGTTGCCCACCAGGTATGATTTCCTGGAAA
TCAAGAAAAAAAAATGAGGCCCACAAAGTCCTTCCCAACCCGGCCCCAAA
AGGAAGTTTAAAAAAATTTCAAAATTTCTTCCCGGAAAATTCAACTCTTT
GGAGGGCCCCCCCCCCAAAAAAAAAAAAAACCTTTTGAAGGAACCCTCGG
GAAATTTGACAGGGGGAACACCCCTGGACAAAGGAAGCATCCCCCCCCGG
GAAAAAGGGTTTGCCCCCCCCCGGGGCCAAGGGAACATCCCCGGGGGTCG
CCCACCCCCACCCACCAAAAAAAACCCTTGGGTCCCTCTTAATCGCAAAA
AAAGGAATGGGGAAGACAACAAAAAATGGGGGGGGCTGCTTGGTCTTCTC
CACATAAACCCAAAA
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