DY258827

Overview
NameDY258827
Unique NameDY258827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1063
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12949 contig Ccv1_Contig12949:690..1753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPAA_DANRE (Mannose-1-phosphate guanyltransferase alpha-A OS=Danio rerio GN=gmppaa PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 7.502e-32
Identity = 83/270 (30.74%), Postives = 129/270 (47.78%), Query Frame = 1
Query:   34 YGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI---------------------ELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            YG +V  E T +V  +VEKP  FV + IN GIYL  P +   I                           +E+++F  +A +GKL+      FW  I      I   RLYL+   K    +LAT    GA   GNV +H +A I    ++GP+V++G G  + +GVR+    ++ G  ++ H+C+ +SI+GW ST+G+WARVE                            ++TILG +V++  E+     +VLPHK++  S  K +I++
Sbjct:  154 YGCIVENEQTDEVLHYVEKPGTFVSDIINCGIYLFTPEIFQHIGSVFQKNQQEMLLEEQSNGWHRAEVIRLEQDIFTALAGQGKLYVYKTDRFWSQIKSAGSAIYASRLYLNQYHKTHPERLATNTEGGAKTRGNVYIHPTANIDPTAVLGPNVSIGTGVTIGAGVRVRESIILHGATLQDHSCVLNSIVGWESTIGKWARVEGTPSDPNPNDPYAKIDSETLFRDGKLTPSITILGCNVNIPSEVIILNSIVLPHKDLNRS-FKNQIIL 422          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPA_XENTR (Mannose-1-phosphate guanyltransferase alpha OS=Xenopus tropicalis GN=gmppa PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 5.377e-30
Identity = 85/269 (31.60%), Postives = 129/269 (47.96%), Query Frame = 1
Query:   34 YGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI-----------ELRPTS---------IEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            YG +V    T +V  +VEKP  FV + IN GIYL +P++   I           +L   S         +E++VF  +A  GKL+     G W  I      I   RLYL         +LA+    G  I GNV +H +A +    ++GP+V++G G  V +GVR+    V+ G  ++ H+C+ ++I+GW STVG+WARVE                            ++TILG +V +  E+     +VLPHKE+  S  K +I++
Sbjct:  154 YGCIVANGETQEVLHYVEKPGTFVSDIINCGIYLFSPSIFQHIAEVFQRNQQELQLEENSSWQRTEVIRLEQDVFTTLAGRGKLYVYKTEGCWSQIKSAGSAIYASRLYLSQYGSTHPERLASTKEGGPTIRGNVYIHPTANVDPSAVLGPNVSIGMGVTVGAGVRIRESIVLHGAVLQDHSCVLNTIVGWDSTVGRWARVEGTPSDPNPNDPYSKIDSETLFREGKLTPSITILGCNVSIPAEVVILNSIVLPHKELSRS-FKNQIIL 421          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPAB_DANRE (Mannose-1-phosphate guanyltransferase alpha-B OS=Danio rerio GN=gmppab PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.564e-29
Identity = 83/270 (30.74%), Postives = 125/270 (46.30%), Query Frame = 1
Query:   34 YGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI--------------EL-------RPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGAN----IVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            YG +V    T +V  FVEKP  FV + IN GIYL  P +   I              EL           +E+++F  +A + KLF      FW  I      I   RLYL    +    +LAT       I G+V +H +A I    ++GP+V++G G  +  GVR+    ++ G  ++ H C+ +SI+GW STVG+WARVE                            ++TILG +V++  E+     +VLPHK++  S  K +I++
Sbjct:  154 YGCIVENHETNEVLHFVEKPSTFVSDIINCGIYLFTPDIFAHIGKVFQRNQQEKIQEELTHGRQMPEVVRLEQDIFTALAGQKKLFVYKTQHFWSQIKSAGSAIYASRLYLKQYHQTHPERLATNQGGTPKITGDVYIHPTANIDPSAVLGPNVSIGKGVTIGGGVRVRESIILHGAVLQDHCCVLNSIVGWDSTVGKWARVEGTPSDPNPNDPYAKIDSETLFRDGGLTPSITILGCNVNIPSEVIIRNSIVLPHKDLNRS-FKNQIIL 422          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPAA_XENLA (Mannose-1-phosphate guanyltransferase alpha-A OS=Xenopus laevis GN=gmppa-A PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.043e-29
Identity = 81/269 (30.11%), Postives = 126/269 (46.84%), Query Frame = 1
Query:   34 YGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI--------------------ELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            YG +V    T +V  +VEKP  FV + IN GIYL +P++   I                     +    +E++VF  +A  GKL+     G W  I      I   RLYL         +LA+    G  I GNV +H +A +    ++GP+V++G G  V +GVR+    ++ G  ++ H+C+ ++I+GW S VG+WARVE                            ++TILG +V +  E+     +VLPHKE+  S  K +I++
Sbjct:  154 YGCIVANRDTQEVLHYVEKPGTFVSDIINCGIYLFSPSIFQHIAEVFQQNQQELQLEENSSWQRMEVIRLEQDVFSTLAGRGKLYVYKTEGCWSQIKSAGSAIYASRLYLSQYGTTHPERLASTKEGGPTIRGNVYIHPTANVDPSAVLGPNVSIGMGVTVAAGVRIRESIILHGAVLQDHSCVLNTIVGWDSMVGRWARVEGTPSDPNPNDPYSKIDSETLFRDGKLTPSITILGCNVSIPAEVVILNSIVLPHKELSRS-FKNQIIL 421          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPA_RAT (Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.485e-29
Identity = 81/262 (30.92%), Postives = 123/262 (46.95%), Query Frame = 1
Query:   34 YGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD-------------RIELRPTS--------IEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN----------------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSS 660
            YG +V    T +V  +VEKP  F+ + IN GIYL +P  L              ++E  P S        +E++VF  +A +G+++  +  G W  I      +   RLYL   +     +LA     G  I GNV +H +A++    ++GP+V++G G  +  GVRL    V+ G  +++H C+  SI+GW STVG+WARVE                             +TILG  V +  E+     +VLPHKE+  S
Sbjct:  152 YGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEALKPLRDVFQRNQQDGQLEESPGSWPGAGTIRLEQDVFSALAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLGRYQITHPERLARHTAGGPRIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTIGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRS 413          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPA_MOUSE (Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.485e-29
Identity = 81/262 (30.92%), Postives = 123/262 (46.95%), Query Frame = 1
Query:   34 YGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD-------------RIELRPTS--------IEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN----------------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSS 660
            YG +V    T +V  +VEKP  F+ + IN GIYL +P  L              ++E  P S        +E++VF  +A +G+++  +  G W  I      +   RLYL   +     +LA     G  I GNV +H +A++    ++GP+V++G G  +  GVRL    V+ G  +++H C+  SI+GW STVG+WARVE                             +TILG  V +  E+     +VLPHKE+  S
Sbjct:  152 YGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEALKPLRDVFQRNQQDGQLEESPGSWPGAGTIRLEQDVFSALAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLGRYQITHPERLARHTPGGPRIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTIGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRS 413          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPA_PAPAN (Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.552e-29
Identity = 81/262 (30.92%), Postives = 122/262 (46.56%), Query Frame = 1
Query:   34 YGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD-------------RIELRP--------TSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN----------------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSS 660
            YG +V    T +V  +VEKP  F+ + IN GIYL +P  L              ++E  P          +E++VF  +A +G+++  +  G W  I      +   RLYL   +     +LA     G  I GNV +H +A++    ++GP+V++G G  V  GVRL    V+ G  +++H C+  SI+GW STVG+WARVE                             +TILG  V +  E+     +VLPHKE+  S
Sbjct:  152 YGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEALKPLRDVFQRNQQDGQLEDSPGLWPGAGTIRLEQDVFSALAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPRIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRS 413          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPAB_XENLA (Mannose-1-phosphate guanyltransferase alpha-B OS=Xenopus laevis GN=gmppa-B PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.014e-28
Identity = 85/274 (31.02%), Postives = 129/274 (47.08%), Query Frame = 1
Query:   34 YGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI---------ELRPTS----------------IEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            YG +V    T +V  +VEKP  FV + IN GIYL +P++   I         EL+  S                +E++VF  +A  GKL+     G W  I      I   RLYL         +LA+    G  I GNV +H +A +    ++GP+V+VG G  V +GVR+    ++ G  ++ H+C+ ++I+GW S VG+WARVE                            ++TILG +V +  E+     +VLPHKE+  S  K +I++
Sbjct:  154 YGCIVSNGDTQEVLHYVEKPGTFVSDIINCGIYLFSPSIFQHIAEVFQRNQLELQLFSCISEENSSWQRTEVIRLEQDVFTTLAGHGKLYVYKTEGCWSQIKSAGSAIYASRLYLSQYSTTHPERLASTKEGGPTIRGNVYIHPTANVDPSAVLGPNVSVGMGVTVGAGVRIRESIILHGAVLQDHSCVLNTIVGWDSMVGRWARVEGTPSDPNPNDPYSKIDSETLFREGKLTPSITILGCNVSIPAEVVILNSIVLPHKELSRS-FKNQIIL 426          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPA_HUMAN (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.324e-28
Identity = 81/262 (30.92%), Postives = 122/262 (46.56%), Query Frame = 1
Query:   34 YGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD-------------RIELRP--------TSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN----------------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSS 660
            YG +V    T +V  +VEKP  F+ + IN GIYL +P  L              ++E  P          +E++VF  +A +G+++  +  G W  I      +   RLYL   +     +LA     G  I GNV +H +A++    ++GP+V++G G  V  GVRL    V+ G  +++H C+  SI+GW STVG+WARVE                             +TILG  V +  E+     +VLPHKE+  S
Sbjct:  152 YGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEALKPLRDVFQRNQQDGQLEDSPGLWPGAGTIRLEQDVFSALAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPSDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRS 413          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPA_DICDI (Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.730e-28
Identity = 74/250 (29.60%), Postives = 113/250 (45.20%), Query Frame = 1
Query:   28 SKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI--------------------------ELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------NMTILGEDVHVCDEIYSNGGVVLPHKEI 651
            ++YG +V +E T ++  + EKP+ FV N IN G+Y  +P   D I                          ++    +E+++F  +A  G +      GFW  I      +    LYL+   K     L  G NI+GNV++  +A +    +IGPDV +GP   +  GVR+    ++    IK HACI  SIIGW S +G WAR+E                 +TI G       EI  +  +V+PHK++
Sbjct:  153 NQYGCLVRDEKTAELLHYAEKPETFVSNLINCGVYCFSPQFFDVIGKTMIDLKTSGQNITTDYPEITRKGFDVERLRLEQDIFVPLAGTGFISVYPYVGFWRQIKNAGSSVYCQELYLNHFAKTKPEVLKKGNNIIGNVIIDSTASVDPSAIIGPDVYIGPNVKIGKGVRVIHSIILDQTEIKDHACIIYSIIGWQSLIGVWARIEGIPNYTPFLYSQDKRRGVTIFGAGAQANGEIIVSNCIVMPHKQL 402          
The following BLAST results are available for this feature:
BLAST of DY258827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
GMPAA_DANRE7.502e-3230.74Mannose-1-phosphate guanyltransferase alpha-A OS=D... [more]
GMPPA_XENTR5.377e-3031.60Mannose-1-phosphate guanyltransferase alpha OS=Xen... [more]
GMPAB_DANRE1.564e-2930.74Mannose-1-phosphate guanyltransferase alpha-B OS=D... [more]
GMPAA_XENLA2.043e-2930.11Mannose-1-phosphate guanyltransferase alpha-A OS=X... [more]
GMPPA_RAT3.485e-2930.92Mannose-1-phosphate guanyltransferase alpha OS=Rat... [more]
GMPPA_MOUSE3.485e-2930.92Mannose-1-phosphate guanyltransferase alpha OS=Mus... [more]
GMPPA_PAPAN4.552e-2930.92Mannose-1-phosphate guanyltransferase alpha OS=Pap... [more]
GMPAB_XENLA1.014e-2831.02Mannose-1-phosphate guanyltransferase alpha-B OS=X... [more]
GMPPA_HUMAN1.324e-2830.92Mannose-1-phosphate guanyltransferase alpha OS=Hom... [more]
GMPPA_DICDI1.730e-2829.60Mannose-1-phosphate guanyltransferase alpha OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258827 ID=DY258827; Name=DY258827; organism=Citrus clementina; type=EST; length=1063bp
CACTTATCTTGTATTGTGGATGAGCCATCAAAATATGGTGTGGTGGTTAT
GGAAGAGTCTACTGGAAAAGTTGAGAAATTCGTAGAGAAACCTAAATTAT
TTGTTGGTAACAAAATTAATGCTGGAATTTATCTTTTGAACCCTGCGGTT
CTTGATCGCATTGAGCTGAGGCCCACCTCCATTGAGAAAGAGGTCTTTCC
AAAAATTGCTTTAGAGGGAAAGCTCTTCGCGATGGTTCTTCCAGGTTTCT
GGATGGACATTGGACAGCCGAGGGATTACATTACAGGCTTGAGACTCTAT
CTGGACTCCCTGAGGAAGAAGTCCTCATTCAAGTTGGCCACTGGTGCTAA
CATTGTAGGCAATGTCTTGGTGCATGAGAGTGCTCAAATTGGGGAGGGAT
GTTTGATTGGACCCGATGTTGCCGTTGGCCCGGGTTGTGTTGTTGAGTCA
GGAGTTAGACTCTCTCGCTGCACAGTGATGCGTGGAGTGCGCATCAAGAA
ACATGCTTGCATATCCAGCAGTATCATTGGATGGCACTCCACTGTTGGGC
AATGGGCTCGCGTAGAGAACATGACCATTCTCGGGGAAGACGTTCATGTC
TGCGATGAAATTTATAGCAATGGGGGTGTGGTTTTGCCGCACAAAGAGAT
AAAATCAAGCATTTTGAAGCCAGAGATAGTCATGTGAGCCACTGATCAGA
TTGCAAGTAGAGAATGTGGTCGGAGAGTAGCAAGTTATCCAGTCATTGTG
CCCGGTAATGTGTTCTTTATCCTTTCTTCATCTTCTTTACATTGTAAAAC
TGTGTGTGTTTTAGTCTTTTGAGTCGTGTGAATTCTAAAGTTGAAGGCTT
TTTTAGTTTCTCTTGTAAAATGCTCAAAATTATCATTGGGTGTGGGAAAT
GGAAATTGTAACTTTTAGTGTAAATAAAGATTTGGCAAAAAACCATCGGG
GTGGGTTTCCGGGGCCAGTAATTGGTCATGATGTCCCGAAAAAATGGCTT
TTATTTTTTGAAATATAAAAAATTTTTTTTTTCCCACTTTTACCAAATTT
CAATTGGCCCGGG
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