DY258839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 9.906e-65 Identity = 123/206 (59.71%), Postives = 155/206 (75.24%), Query Frame = 2 Query: 134 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK-----GQPVAQKSGCCST 733 +YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK D+ +K V +A ADE GI F ETSAK + NVE+ F ++A IK R+A + A+ P++ IK G A KS CC + Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQ-PSITIKPADQSGNQAAAKSACCGS 215
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.294e-64 Identity = 120/204 (58.82%), Postives = 155/204 (75.98%), Query Frame = 2 Query: 116 STTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 727 +T YD+L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E +GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF +++ W+ I+++ASD+VNK+L+GNKCD+T KVV K+ ADE GI F+ETSAK+S NVE+AF+ +A IK RM P+ P I P +K+ CC Sbjct: 5 ATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTPN-----DPDHTICITPNNKKNTCC 203
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.690e-64 Identity = 113/169 (66.86%), Postives = 146/169 (86.39%), Query Frame = 2 Query: 128 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 634 +PEYD L K+L+IGDSGVGKSC+LLRFAD+ + +SYISTIGVDF IRT+E DGK IKLQIWDTAGQERF+TIT+SYYRGAHG+IIVYD+T +SFN++K+WL ++DR+AS +V KL+VGNKCDL + + V ++ AK FADE+ IP METSAK+ST +++AF+ +A+ IK Sbjct: 27 HPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIK 195
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.095e-63 Identity = 124/209 (59.33%), Postives = 154/209 (73.68%), Query Frame = 2 Query: 134 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK--------GQPVAQKSGCCST 733 +YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK D+ +K V +A ADE GI F ETSAK + NVE+ F ++ IK R++ S A P T++I GQ QKS CC T Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDS--RAEPATIKISQTDQAAGAGQ-ATQKSACCGT 216
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.698e-62 Identity = 120/209 (57.42%), Postives = 151/209 (72.25%), Query Frame = 2 Query: 131 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM---------ASQPSMNNARPPTVQIKGQPVAQKSGCC 727 P+YD L KLLL+GDSGVGKSCLLLRF DD + S+I+TIG+DFKI+ V+ DGK +KLQIWDTAGQERFRTITS+YYRGA GII+VYD+TD+ SFNNV+ W+ I+++ASDNVNK+LVGNK DL +K VVS +A ADE G F ETSAKD+ +VE+AF+A+A + RM Q ++ A+P + AQ CC Sbjct: 8 PDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQLLQQQQLSAAQPVRLTSGSPSPAQGKSCC 216
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.480e-60 Identity = 106/166 (63.86%), Postives = 140/166 (84.34%), Query Frame = 2 Query: 137 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 634 YDYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI+++YDVTD++SF+NV+ W + ++++AS+NV K+L+GNKCD + VS+E +A ADE+G+ F+E SAK + NV++AF +A IK Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIK 171
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.061e-58 Identity = 114/187 (60.96%), Postives = 149/187 (79.68%), Query Frame = 2 Query: 134 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQI 691 EYDYLFK+++IGDSG GKS LLLRFAD++Y ESY+STIGVDFKI+TV+ D TIKLQIWDTAGQERFRTITS+YYRGAHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK DL ++VVS + AK A++ + ++E SAK +NVE+AF +A ++KD++ PS NA TV + Sbjct: 3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS--NAPASTVSL 187
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.810e-58 Identity = 106/193 (54.92%), Postives = 147/193 (76.17%), Query Frame = 2 Query: 125 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQP 703 M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRTVE DGK IKLQIWDTAGQERFRTIT++YYRGA GI+ VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ + VS E + A + GI F+ETSAK S NVE+AF+ +A I ++ + + N+ + ++K P Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKKMNENSLQEAVDKLKSPP 193
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.363e-58 Identity = 108/190 (56.84%), Postives = 143/190 (75.26%), Query Frame = 2 Query: 125 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK 694 M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTV+ +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ A + V E A A E GI F ETSAK S NV++AF ++A I + + S N +PP+ +K Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLK 190
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.087e-58 Identity = 104/182 (57.14%), Postives = 144/182 (79.12%), Query Frame = 2 Query: 125 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNA 670 M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ + VS E + A + GI F+ETSAK STNVE+AF +A I ++ + + +N+ Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182 The following BLAST results are available for this feature:
BLAST of DY258839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258839 ID=DY258839; Name=DY258839; organism=Citrus clementina; type=EST; length=962bpback to top |