DY258839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 9.001e-50 Identity = 89/175 (50.86%), Postives = 131/175 (74.86%), Query Frame = 2 Query: 137 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPS 658 YD FK++L+GDSGVGK+CLL+RF D +++ ++IST+G+DF+ + ++ DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA +V +L+GNK D T ++VV E + A E G+PFMETSA+ NV+ AF A+A +K R A PS Sbjct: 64 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPS 238
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 1.176e-49 Identity = 97/202 (48.02%), Postives = 134/202 (66.34%), Query Frame = 2 Query: 137 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM------ASQPSMNNARPPTVQIKGQPVAQKSGC 724 +DY+FKLLLIG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ DN +LVGNKCDL +VVS E + A ++G F E SAK++ NV+Q F + I D+M +S P N P + P Q S C Sbjct: 19 FDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP---ALGDTPPPQPSSC 217
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.176e-49 Identity = 97/201 (48.26%), Postives = 135/201 (67.16%), Query Frame = 2 Query: 137 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM-----ASQPSMNNARPPTVQIKGQPVAQKSGC 724 +DY+FKLLLIG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ DN +LVGNKCDL +VV E + AD++G F E SAK++ NV+Q F + I ++M S S +N + P V P Q S C Sbjct: 19 FDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSSSGSNGKGPAV--GDAPAPQPSSC 217
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.176e-49 Identity = 92/201 (45.77%), Postives = 139/201 (69.15%), Query Frame = 2 Query: 137 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCC 727 +DY+FKLL+IG+S VGK+ L R+ADD++ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ DN +LVGNKCD+ +VV E + A+++G F E SAK++ +V QAF + +I D+M+ + PS+ T P+ Q++ C Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDTLDTDPSLLGTSKNTRLSDTPPLLQQNCSC 219
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 1.176e-49 Identity = 89/175 (50.86%), Postives = 129/175 (73.71%), Query Frame = 2 Query: 137 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPS 658 YD FK++L+GDSGVGK+CLL+RF D +++ ++IST+G+DF+ + ++ DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA +V +L+GNK D T +VV E + A E G+PFMETSAK NV+ AF A+A +K R PS Sbjct: 61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPS 235
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.535e-49 Identity = 97/185 (52.43%), Postives = 137/185 (74.05%), Query Frame = 2 Query: 125 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPP 679 M+ EY++LFK +L GDSGVGK+ +L R DD++ E++I TIG++FKI+TV +GK IKLQIWDTAG++RFR + +S+YRG HG+IIVYDVTDQ SF NV W+ +I RYA++NV K+++GNK DL + KVV A+ FAD + IPF E SAK S N+E+AF+++ +R+ + S+ + P Sbjct: 1 MSKEYEHLFKFVLAGDSGVGKTSILFRITDDTFTETHI-TIGIEFKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAFISLVKLCINRI-EETSLKKTQSP 182
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 1.535e-49 Identity = 95/209 (45.45%), Postives = 142/209 (67.94%), Query Frame = 2 Query: 113 KSTTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK--SGCCS 730 +S +P YD K++L+GDSGVGK+C L++F D +++ ++I+T+G+D + + V DG +KLQIWDTAGQERFR++T +YYR A ++++YD+T+Q SF+N++ WL EI YA +V +L+GNK D+++ +V+ E + A E G+PFMETSAK NVE AF+A+A +K R QP P+ QI+ +QK S CCS Sbjct: 18 RSPPFSPNYDLTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQPD-----EPSFQIRDYVESQKKRSSCCS 221
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.467e-49 Identity = 100/196 (51.02%), Postives = 136/196 (69.39%), Query Frame = 2 Query: 146 LFKLLLIGDSGVGKSCLLLRFAD-DSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQ-IKGQPVAQKSGCC 727 +FK+LLIGDS VGK+ LLLRF D +++ E+ ++ VD+K + + DG+T LQIWDTAGQERFRTITSS+YRGAHG+++ YDVTDQ ++NNV W+ EI RY V+++LVGNKCDL K+V+ A+ +AD +GIPF+ETSA NVE+AFMAMA I + + ++P V+ + G P K C Sbjct: 6 VFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGNKCDLEDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEI-----YRNHIGGSKPSVVKPVCGSPPRTKKNIC 196
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 193.741 bits (491), Expect = 1.300e-48 Identity = 93/209 (44.50%), Postives = 143/209 (68.42%), Query Frame = 2 Query: 113 KSTTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK--SGCCS 730 +S +P YD K++L+GD+GVGK+C L++F D +++ ++I+T+G+DF+ + V DG +KLQIWDTAGQERFR++T +YYR A ++++YD+T++ SF+N++ WL EI YA +V +L+GNK D+++ +V+ E + A E G+PF+ETSAK NVE AF+A+A +K R Q A P+ QI+ +QK S CCS Sbjct: 18 RSPPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQ-----ADEPSFQIRDYVESQKKRSSCCS 221
BLAST of DY258839 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.782e-48 Identity = 88/175 (50.29%), Postives = 128/175 (73.14%), Query Frame = 2 Query: 137 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPS 658 YD FK++L+GDSGVGK+CLL+RF D +++ ++IST+G+DF+ + V+ DG +KLQIWDTAGQERFR++T +YYR AH ++++YDVT++ SF++++ WL EI +A D+V +L+GNK D + V E A+ A + G+PFMETSAK NV+ AF A+A +K R PS Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKELKQRHTKAPS 234 The following BLAST results are available for this feature:
BLAST of DY258839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258839 ID=DY258839; Name=DY258839; organism=Citrus clementina; type=EST; length=962bpback to top |