DY258860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_PYRHO (Acidic ribosomal protein P0 homolog OS=Pyrococcus horikoshii GN=rplP0 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.805e-21 Identity = 63/206 (30.58%), Postives = 99/206 (48.06%), Query Frame = 1 Query: 22 MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEY 636 + +NT+++ I+ A++ G L+ + G++ T + APA+ G V P DVVVP G T L P Q L IP +I KG V I +++ G+ + A +L LGI+P GL V +VYE+G VY+P+VL + E + ++ + LA+ I+YPT + A+ N VA+ Y Sbjct: 54 VSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLNAKTVAIEAGY 259
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_PYRFU (Acidic ribosomal protein P0 homolog OS=Pyrococcus furiosus GN=rplP0 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.970e-21 Identity = 60/211 (28.44%), Postives = 104/211 (49.29%), Query Frame = 1 Query: 7 DSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEY 636 + ++ + +NT+++ I+ A++ G LI ++G G++ T + APA+ G P DVV+P G T L P Q + IP +I +G V I +++ G+++ A +L LGI+P GL + +VYE+G +Y+P+VL + E + + + LA+ I+YPT + A+ N AVA+ Y Sbjct: 49 NGLLRVSRNTLIELAIKKVAQELGKPELEKLINYIEGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVIPAGPTSLAPGPIVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELANILNALGIQPLEVGLDLLAVYEDGIIYTPDVLAIDESEYINMLQKAYMHAFNLAVNIAYPTPQTIEAIIQKAFLNAKAVAVEAGY 259
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_METM7 (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rplP0 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.970e-21 Identity = 62/213 (29.11%), Postives = 104/213 (48.83%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEY 636 R + M +NT+MKR I AE+TGN F L L +I T+ + AP + G AP D+ V G+TG+ P S + + IP I+KG + I ++++G+ V A +L+ LGI+P + GL V VYE+G +Y+ L + E++ + K + + L++ PT A + A+ + AV++ + + Sbjct: 52 RDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVVKEGEVVSQKLAVVLSALGIKPVTVGLNVLGVYEDGVIYTESDLKIDEEEFIGKIQKAYTSAFNLSVNAVIPTSATIETIVQKAFNDAKAVSVESAF 264
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_METMP (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis GN=rplP0 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.490e-21 Identity = 61/213 (28.64%), Postives = 105/213 (49.30%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEY 636 R + M +NT+MKR I AE+TGN F L+ + +I T+ + AP + G +AP D+ V G+TG+ P S + + IP I+KG + I ++++G+ V A +L+ L I+P + GL V VYE+G +Y+ L + E++ V K + + L++ PT A + A+ + AV++ + + Sbjct: 52 RDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEMNPFKLYKTLDESKSPAPVKGGAIAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKIVVKEGEVVSQKLAVVLSALDIKPVTVGLNVLGVYEDGVIYTESDLKIDEEEFVGKIQKAYTSAFNLSVNAVIPTSATVETIVQKAFNDAKAVSVESAF 264
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_METJA (Acidic ribosomal protein P0 homolog OS=Methanocaldococcus jannaschii GN=rplP0 PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.446e-20 Identity = 63/219 (28.77%), Postives = 106/219 (48.40%), Query Frame = 1 Query: 22 MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLA 675 M +NT++ R ++ AE+ N L ++ ++ T + AP R G +AP D+ V G+TG+ P + + IP I KG + I +++KG+ V AA+L +LGI+P GL + +VYE+G +Y+P+VL + E+ L+ ++ LA +YP P + A+ N A AL+ E +F + + LA Sbjct: 58 MSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADIQAAYQNAFNLAFNTAYPAKEVLPFLIQKAFIN--ARALSVETAFVTKETAGDILA 274
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_PYRAB (Acidic ribosomal protein P0 homolog OS=Pyrococcus abyssi GN=rplP0 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.466e-20 Identity = 61/206 (29.61%), Postives = 99/206 (48.06%), Query Frame = 1 Query: 22 MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEY 636 + +NT+++ I+ A++ G L + G++ T + APA+ G V P DVV+P G T L P Q + IP +I +G V I +++ G+ + A +L LGI+P GL V +VYE+G VY+P+VL + E + ++ + LA+ I+YPT + A+ N AVA+ Y Sbjct: 54 VSRNTLIELAIKKAAQELGKPELEKLAEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVIPAGPTPLAPGPIVGQMQAMGIPARIERGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMVQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLNAKAVAVEAGY 259
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_NATPD (Acidic ribosomal protein P0 homolog OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rplP0 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.224e-19 Identity = 60/215 (27.91%), Postives = 102/215 (47.44%), Query Frame = 1 Query: 4 GDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFP 645 G + + + +NT+M+R + + G L+ ++G VGLI T + AP G VAP D+V+P G+TG+DP Q + +I G+++++ ++ G++V S + +L++LGI P GL ++ V G ++SPE LD+ + S+ S L++ YPT AP M A +V L+ P Sbjct: 54 GTAALRVSRNTLMERALNEGGDGLGE-----LVEHVEGQVGLIGTNDNPFGLYQQLEESKTPAPINAGEVAPNDIVIPEGDTGVDPGPFVGDLQQVGANARIEGGSIKVVEDSTVLSAGEEVSSDLSNVLSELGIEPKEVGLDLRGVSSEGVLFSPEELDIDVESYRTDIESAASAARNLSVNAEYPTARTAPSMLAKAAGEAKSVGLSAAVESP 263
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_META3 (Acidic ribosomal protein P0 homolog OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rplP0 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.599e-19 Identity = 55/206 (26.70%), Postives = 102/206 (49.51%), Query Frame = 1 Query: 22 MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEY 636 M +NT++KR I AE++ + F L L+ ++ T + AP + G +AP D+VV G+TG+ P + +P I+KG + I ++++G+ V A +L+ LGI+P GL + + YE+G VY+ +VL + E++ V+ S+ + L++ + PT + A+ AV++ + + Sbjct: 58 MSRNTLIKRAIEELAEESNDPKFAKLAECLERGAAIVITDMNPFKLYKTLEDGKAPAPIKAGAIAPSDIVVEAGSTGMPPGPFLGELKGAGLPAVIDKGKIAIKDDTVIVKEGEVVSPKVAVVLSALGIKPTKVGLDLLAAYEDGIVYTSDVLKIDEEEFVQNIQSAFTSAFNLSVNAAIPTTETIETILQKAFTEAKAVSIESAF 263
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_THEGJ (Acidic ribosomal protein P0 homolog OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rplP0 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.651e-19 Identity = 58/217 (26.73%), Postives = 100/217 (46.08%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQ 648 RG +++ + +NT+++ I+ A++ L ++G ++ T+ + APA+ G V P DVV+P G T L P Q L IP +I KG V I +++ G+ + A +L LGI P GL + + YE+ +Y+P+VL + E + + + L++ +YPT + AY VA+ Y P+ Sbjct: 46 RGKALLRVSRNTLIELAIKRAAQELNKPDLEKLADYIEGGAAILATEMNPFKLYKLLEESKTPAPAKPGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVTIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYEDDIIYTPDVLAIDEQEYINMLQQAYMHAFNLSVNTAYPTKQTIEAIIQKAYLGAKNVAVEAGYITPE 262
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_HALSA (Acidic ribosomal protein P0 homolog OS=Halobacterium salinarium GN=rplP0 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.717e-18 Identity = 55/215 (25.58%), Postives = 102/215 (47.44%), Query Frame = 1 Query: 4 GDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFP 645 G + + M +NT++ R + E+ G+ L ++G VGL+ T + AP G VAP D+VVP G+TG+DP Q + +I +G+++++ + +G+ V + +L++LGI P GL ++ V+ G +++PE L++ D+ S+ + L++ +YPT AP + ++ L P Sbjct: 55 GQAALRMSRNTLLVRAL----EEAGD-GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKGRGEAKSLGLQASVESP 264 The following BLAST results are available for this feature:
BLAST of DY258860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258860 ID=DY258860; Name=DY258860; organism=Citrus clementina; type=EST; length=941bpback to top |