DY258860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_METBF (Acidic ribosomal protein P0 homolog OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rplP0 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.506e-13 Identity = 49/198 (24.75%), Postives = 84/198 (42.42%), Query Frame = 1 Query: 10 SVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAY 600 +V+ + +N++ +R + E + + L L+FT +P + G +AP D++V G T P Q IP I+ G V + + + G+ V A +L KL I P GL +++VY+NG++Y PE+L + E + LA+ +YPT A + A+ Sbjct: 56 AVLKVSRNSLTERALNQLGE-----SIPEMNKYLDKQTALVFTNESPFKLYKVLEQTKTPSPIKGGAIAPADIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEVVSQKLATMLTKLEIYPLIVGLDLRAVYDNGAIYEPELLAIDESQYFSDITRAAQSAFNLAVNTAYPTSATIGTLLAKAF 248
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_METMA (Acidic ribosomal protein P0 homolog OS=Methanosarcina mazei GN=rplP0 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.472e-12 Identity = 49/198 (24.75%), Postives = 84/198 (42.42%), Query Frame = 1 Query: 10 SVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAY 600 +V+ + +NT+ +R + E + + L LIFT +P + G +AP D++V G T P Q IP I+ G V + + + G+ V A +L+KL I P GL +++ Y++G++Y PE+L + E + L++ +YPT A + AY Sbjct: 56 AVLKVSRNTLTERALNQLGE-----SIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATIGTLLAKAY 248
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_SULSO (Acidic ribosomal protein P0 homolog OS=Sulfolobus solfataricus GN=rplP0 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.229e-12 Identity = 58/218 (26.61%), Postives = 87/218 (39.91%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQA 651 RG + + + KNT+ K A K L L G IFTK + A G A +VV+P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L + + LA+ I+YPT +KN +A+A Y P++ Sbjct: 55 RGKATIKVTKNTLFKI-----AAKNAGIDIEKLEQYLTGPNVFIFTKDNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAESLKLDLEGYRSNITEAYRNAFTLAVEIAYPTPDVLKFTISKVFKNAIALASEIGYITPES 267
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_SULIA (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain M.16.27) GN=rplP0 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.217e-12 Identity = 57/218 (26.15%), Postives = 89/218 (40.83%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQA 651 RG +++ + KNT+ K A K L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L+ + A + LA+ I+YP +KN +A+A Y P++ Sbjct: 55 RGKAIIKVTKNTLFKI-----AAKNAGINTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLNLEGYRSNIAEAYRNAFTLAVEIAYPVPDVLKFTISKVFKNAIALASEIGYLTPES 267
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_METBU (Acidic ribosomal protein P0 homolog OS=Methanococcoides burtonii (strain DSM 6242) GN=rplP0 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.507e-12 Identity = 43/147 (29.25%), Postives = 70/147 (47.62%), Query Frame = 1 Query: 127 LIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPT 564 LIFTK + +P + G+VA D++V G T P Q IP I+ G V I + + G+ V AA+L +L I P GL +++V E GS+++P+VL + E+ + F + +++ +YPT Sbjct: 89 LIFTKQNPFKLYKLLEKSKTPSPIKAGMVATSDIIVEKGPTSFPPGPILGDMQGAGIPAAIDGGKVVIKETKAVAKAGEVVSQKLAAMLTRLEIYPLEVGLDLRAVLEEGSIFTPDVLAIDEEQIFSNFVQAAQQAFNMSVNAAYPT 235
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_SULIY (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12 Identity = 56/218 (25.69%), Postives = 89/218 (40.83%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQA 651 RG +++ + KNT+ K A K + L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L+ + A + LA+ I+YP +KN + +A Y P++ Sbjct: 55 RGKAIIKVTKNTLFKI-----AAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLNLEGYRSNIAEAYRNAFTLAVEIAYPVPDVLKFTINKIFKNAITLASEIGYLTPES 267
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_SULIN (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rplP0 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12 Identity = 56/218 (25.69%), Postives = 89/218 (40.83%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQA 651 RG +++ + KNT+ K A K + L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L+ + A + LA+ I+YP +KN + +A Y P++ Sbjct: 55 RGKAIIKVTKNTLFKI-----AAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLNLEGYRSNIAEAYRNAFTLAVEIAYPVPDVLKFTINKIFKNAITLASEIGYLTPES 267
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_SULIL (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12 Identity = 56/218 (25.69%), Postives = 89/218 (40.83%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQA 651 RG +++ + KNT+ K A K + L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L+ + A + LA+ I+YP +KN + +A Y P++ Sbjct: 55 RGKAIIKVTKNTLFKI-----AAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLNLEGYRSNIAEAYRNAFTLAVEIAYPVPDVLKFTINKIFKNAITLASEIGYLTPES 267
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_ARCFU (Acidic ribosomal protein P0 homolog OS=Archaeoglobus fulgidus GN=rplP0 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12 Identity = 51/209 (24.40%), Postives = 97/209 (46.41%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVAL 624 RG + + + KNT+++R + + G +L L L + +I + +P + V+P+DVVV G T + P + Q+ +P I KG V + +++ G+ V A L +L I+P GL V+++ ++G + +PE L + + ++E F + M LA+ +Y T A + + A + +A+ Sbjct: 50 RGKAEIKVVKNTLLERAL----DALGGD-YLKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPLMAELQMAGLPVAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPETLAIDTEKVLEDFQRAYQMALNLAVNSAYVTEETAEILIMKAVMDARNLAI 253
BLAST of DY258860 vs. ExPASy Swiss-Prot
Match: RLA0_SULIM (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.227e-11 Identity = 56/218 (25.69%), Postives = 88/218 (40.37%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQA 651 RG +++ + KNT+ K A K L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L+ + A + LA+ I+YP +KN + +A Y P++ Sbjct: 55 RGKAIIKVTKNTLFKI-----AAKNAGINIEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLNLEGYRSNIAEAYRNAFTLAVEIAYPVPDVLKFTINKIFKNAITLASEIGYLTPES 267 The following BLAST results are available for this feature:
BLAST of DY258860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258860 ID=DY258860; Name=DY258860; organism=Citrus clementina; type=EST; length=941bpback to top |