DY258868

Overview
NameDY258868
Unique NameDY258868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1140
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACC1 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 10987) GN=dapL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.079e-31
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWRTGVIVKVKGRNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACC2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain G9842) GN=dapL PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.409e-31
Identity = 80/215 (37.21%), Postives = 119/215 (55.35%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H  PE+ F+E  T   I   +  L + +      KTG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   + ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHRIPEIGFKEWETQQYILDYIGTLSLEFVEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACWK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus weihenstephanensis (strain KBAB4) GN=dapL PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.404e-31
Identity = 83/218 (38.07%), Postives = 123/218 (56.42%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLG-IPYAY---PVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V VRR +H+ PE+ F+E  T   I   LD +G +P  Y      KTG++ ++ G     ++  RAD+D LP+ E   +E+ S  +G MHACGHD+H T+ LG   L     ++++  +  +FQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQVRRDLHKIPEIGFKEWKTQQYI---LDYIGTLPNEYLEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEYSSVHEGMMHACGHDLHATIGLGL--LTAAVSERIDDDLVFIFQPAEEGPGGALPMLESDELKEWKPNMILGLHIAPEYSVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACCR (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dapL PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.355e-31
Identity = 80/215 (37.21%), Postives = 118/215 (54.88%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H  PE+ F+E  T   I   +  L   +      KTG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   + ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHRIPEIGFKEWKTQQYILDYIGTLSHEFVEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACC4 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain B4264) GN=dapL PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.355e-31
Identity = 80/215 (37.21%), Postives = 118/215 (54.88%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H  PE+ F+E  T   I   +  L   +      KTG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   + ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHRIPEIGFKEWKTQQYILDYIGTLSHEFVEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_ANOFW (Putative N-acetyldiaminopimelate deacetylase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dapL PE=3 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 5.355e-31
Identity = 79/215 (36.74%), Postives = 117/215 (54.42%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V++RR +H+ PEL F+E  T   I   L  L          +TGI+ ++ G+     +  RADMD LP+ E  +   +S  +G+MHACGHD+H  + LG   L H     +   +  +FQPAEEG  GA  M++   +     + I  +HI    P G+IA+  G   A TS   + + G+GGHAA PH T D ++ ASS+I+ LQ ++SR  +P
Sbjct:    3 VNIRRDLHQIPELGFQEFKTQQYILDYLATLPSERLQIKTWRTGILVRVHGTAPTKTIGYRADMDGLPIDEQTDVPFRSTHEGRMHACGHDMHMAIALGV--LTHVVHHPIRDDMLFIFQPAEEGPGGALPMLESDEMKQWMPDMILALHIAPAYPVGTIATKEGLLFANTSELFIDLIGKGGHAAFPHETKDMVVAASSLIMQLQTIVSRNVNP 215          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 9.134e-31
Identity = 82/220 (37.27%), Postives = 121/220 (55.00%), Query Frame = 1
Query:  124 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +++ L+S+RR +H+ PEL F+E  T A +   LD            +TG+  ++ G+    V A RADMD L + E   +  +S  +GKMHACGHD+H T+ LG     H   + ++  +  +FQPAEEG  GA  M+    L     + I  +HI    P G+IA+  G   A TS   + +EG+GGHAA PH   D ++ AS+++  LQ +ISR  DP
Sbjct:    3 NREQLISIRRDLHQIPELGFKEFKTQAYLINHLDAYSKDRIEMETWRTGLFVKVKGTNPERVFAYRADMDGLSIPEDTGYPFQSVHEGKMHACGHDLHMTIALGVID--HFVHEPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDFITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMVVAASALVGQLQSVISRNVDP 220          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_LEUCK (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc citreum (strain KM20) GN=dapL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.193e-30
Identity = 88/231 (38.10%), Postives = 124/231 (53.68%), Query Frame = 1
Query:  115 AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPY----AYPVAKTGIVAQIGSGSRPV--VALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLL--HQRKDKLEGTVRILFQPAEE---GGAGAFHM-IKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            ++ + + L + RR++H+ PE   EE  T   +  +L      Y          T I+     G+ PV  +  R D+DALP+QE    +  S+  GKMHACGHDVH TM LG A+    HQ KD L     I FQPAEE   GG  A+ M + EG     E  +G+H    +P G++++++G   A T+   V V G GGHAA PH   DPI+ A+ +I+ LQ ++SR  DP
Sbjct:    2 SEMNFETLQTFRRELHQIPETALEEFKTHDYLLTKLKSWQQDYMTIKTVEALPTAILVYF-QGTNPVRTIGYRTDIDALPIQEATGLDFASQHPGKMHACGHDVHMTMALGLAQYFSQHQPKDNLI----IFFQPAEEAESGGKVAYDMGLFEGKWRPDE-FYGIHDQPNLPAGTLSTLAGTLFAGTAELKVDVIGTGGHAAYPHLAKDPIVIAAELIIQLQTVVSRSVDP 226          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_OCEIH (Putative N-acetyldiaminopimelate deacetylase OS=Oceanobacillus iheyensis GN=dapL PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.558e-30
Identity = 81/217 (37.33%), Postives = 122/217 (56.22%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK--TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIK--EGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L  +RR +H+ PEL F+E  T A +   ++++       + K  TGI+  + G      +  RAD+D LP+ E     + S  +G+MHACGHD+H T+ LGA + L Q  D +   V  +FQPAEEG  GA  M++  E      + +F +HI   +P G+++S +G   A TS   +  EG GGHAA PH T D  + AS+ ++ LQQ++SR  +P
Sbjct:    5 LEQIRRDLHQIPELGFQEFKTQAYLLERINEIATENV-EIKKWSTGILVYVHGKSPARKIGFRADIDGLPILEQTNLPYASLHEGRMHACGHDLHMTIALGALEKLIQ--DPINDDVIFVFQPAEEGPGGAKPMLESEEFQQWKPDMMFALHIAPELPVGTVSSKAGLLFANTSELFIDFEGVGGHAAYPHLTKDMTVAASNFVVQLQQIVSRGLNP 218          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACSK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus clausii (strain KSM-K16) GN=dapL PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.658e-30
Identity = 77/215 (35.81%), Postives = 113/215 (52.56%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLG-IPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+ +RR  H+ PEL F E  T  L+   +  +          KT +  ++       +A RADMD LP+ E   +   SK +G MHACGHD H T+ LG   L H    + E  +  +FQPAEEG  GA  +I+   LG    + I+ +HID  +P GSIA+  G   A TS   +  +G+GGHAA PH+  D ++  +  +  +Q +++R  DP
Sbjct:    6 LIHIRRAFHQIPELGFNEFKTQKLLLDTISNMEQTRLQIKTWKTAVFVRVEGRQDYTIAYRADMDGLPITEETGYSFASKHEGAMHACGHDFHMTIALGL--LDHFASHEPECHLLFIFQPAEEGPGGAKPIIEADVLGAWQPDEIYALHIDPNLPVGSIATKPGLLFANTSELFIDFQGKGGHAAYPHTANDMVVACAHFVTQVQTVVARNIDP 218          
The following BLAST results are available for this feature:
BLAST of DY258868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_BACC11.079e-3138.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC21.409e-3137.21Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACWK2.404e-3138.07Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCR5.355e-3137.21Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC45.355e-3137.21Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_ANOFW5.355e-3136.74Putative N-acetyldiaminopimelate deacetylase OS=An... [more]
DAPL_BACP29.134e-3137.27Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_LEUCK1.193e-3038.10Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
DAPL_OCEIH1.558e-3037.33Putative N-acetyldiaminopimelate deacetylase OS=Oc... [more]
DAPL_BACSK2.658e-3035.81Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258868 ID=DY258868; Name=DY258868; organism=Citrus clementina; type=EST; length=1140bp
CAACGGATTGTTATTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATGTCTCAGTCTCCT
TTTATCAATTTATTCTGAAACCTGTGAACTTTTGCCATTGAAAGCATGAA
GAATTCTCCATTTCACTCTTAATAATTTTTACTGGAATTTTTACTGCTTG
AATGATTGCAAAGAAAAACTTGAAGTGAATATATCATTGGGTGAACTAAA
TACTAGTTTGGCTTTGGGCTGAAAGGGGGTTTCCTGTTACTTAAGTTTAA
AAGGGGGGAACTGGATTTTTAATAAAAATTCCCCCCTTTTGTTGGAATTT
TGGAAGGCCCTTTTGAGGAGATTCTTACAAACTTGGAGGGGCTTTTTATC
CCACCTCCCAAAAAAAAGGGGTGGGAAGGGAAGGGGTTGT
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