DY258872

Overview
NameDY258872
Unique NameDY258872
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1002
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 5.317e-24
Identity = 60/160 (37.50%), Postives = 85/160 (53.12%), Query Frame = 1
Query:  193 QAPEG-PILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKL 669
            QA  G P+LC + CGF+G+ AT++MCS C++   L    A +A                   + + S  +    V    FS   S  +      V+ K    RC +C K+VGL GF CRCG  +C  HRY +KH C FD++ A+R+AIA+ANP++K EKL
Sbjct:  196 QASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCL-LNGATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVNGAAFS---SKNNPEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKL 351          
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.547e-23
Identity = 70/204 (34.31%), Postives = 91/204 (44.61%), Query Frame = 1
Query:  205 GPILCVNNCGFFGSAATMNMCSKCHKAMILNQ-------------------------EQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSM--------------EPS---SGSSFGFAGVKAKEGPK----RCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 678
            GP+LC   CGF+G+  T  MCS C+K  +  Q                         ++A  +                  P+ A  V  Q+  + I +                 +PS   S  S   +  KA E PK    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY+  A   I K NPVV AEK+ +I
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.186e-21
Identity = 60/198 (30.30%), Postives = 81/198 (40.91%), Query Frame = 1
Query:  208 PILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQ-----------LAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGV------------------------------KAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 678
            P+LC   CGF+G+  T  MCS C+K  +  Q  +              +               +  + + S  +Q  PV  +    E  + S      V                              K K+   RC  C K+VGLTGF CRCGN++C VHRYSD H C ++Y+  A E I K NPVV  EK+ KI
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 7.186e-21
Identity = 60/198 (30.30%), Postives = 81/198 (40.91%), Query Frame = 1
Query:  208 PILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQ-----------LAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGV------------------------------KAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 678
            P+LC   CGF+G+  T  MCS C+K  +  Q  +              +               +  + + S  +Q  PV  +    E  + S      V                              K K+   RC  C K+VGLTGF CRCGN++C VHRYSD H C ++Y+  A E I K NPVV  EK+ KI
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.226e-20
Identity = 46/81 (56.79%), Postives = 54/81 (66.67%), Query Frame = 1
Query:  436 EPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 678
            +PSS  S   A    K    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY+  A   I K NPVV AEK+ +I
Sbjct:  133 QPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.355e-19
Identity = 54/161 (33.54%), Postives = 78/161 (48.45%), Query Frame = 1
Query:  208 PILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKE----GPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 678
            P LC+  CGFF ++ T N+CSKC+   + ++    LA                                    F++   +        V A+E    G K    C K+VGL GF+CRCG+LF A HRY ++H CP DY++AA + +AK NPVVK +KL ++
Sbjct:    5 PSLCIRGCGFFSTSQTKNLCSKCYNDFLKDESARYLAT-----------------------------------FNVNTKAAEE-----VTAQEATVLGSKGGCACKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKLFRL 125          
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.150e-19
Identity = 57/158 (36.08%), Postives = 74/158 (46.84%), Query Frame = 1
Query:  205 GPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 678
            G  +C   CGFFGSAAT  +CSKC+K     Q+Q Q                       +  V   +  + IK  S     G++         +   RC  C K+VGL GF CRCG +FC        H C FDY+ A REAIA+ NP+V A K++KI
Sbjct:   14 GAAMCAAGCGFFGSAATDGLCSKCYK-----QQQPQ--------PRHLIGTAAGDSDKTSLKVVADLSTLVIKDNSGVGGEGTTVMAPPATVTKAKNRCKACRKKVGLLGFPCRCGGMFCGA------HACAFDYKAAGREAIARHNPLVVAPKINKI 152          
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.147e-18
Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = 1
Query:  496 RCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 678
            RC  C KRVGLTGF CRCG LFC  HR+S+ H C FDY+TA RE IA+ANPV++A K+ KI
Sbjct:  114 RCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.498e-18
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 1
Query:  373 PIIAGSVDLQVGPVE-IKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 678
            P   G V L+  P   +   + +PS   S      K K+   RC  C K+VGLTGF CRCGN++C VHRYSD H C ++Y+  A E I K NPVV  EK+ KI
Sbjct:  123 PRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE--KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of DY258872 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.498e-18
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 1
Query:  373 PIIAGSVDLQVGPVE-IKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 678
            P   G V L+  P   +   + +PS   S      K K+   RC  C K+VGLTGF CRCGN++C VHRYSD H C ++Y+  A E I K NPVV  EK+ KI
Sbjct:  123 PRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE--KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
The following BLAST results are available for this feature:
BLAST of DY258872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP3_ORYSJ5.317e-2437.50Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_HUMAN1.547e-2334.31AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
ZFAN6_PONAB7.186e-2130.30AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_HUMAN7.186e-2130.30AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN5_MOUSE1.226e-2056.79AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
SAP8_ARATH1.355e-1933.54Putative zinc finger A20 and AN1 domain-containing... [more]
SAP10_ORYSJ5.150e-1936.08Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ1.147e-1865.57Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN6_RAT1.498e-1845.63AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_MOUSE1.498e-1845.63AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD04FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258872 ID=DY258872; Name=DY258872; organism=Citrus clementina; type=EST; length=1002bp
GATTGAAGGCAAGCTTTCACGTCCATAAAACGACGTCGATTAGTTTCAGT
CTTGTCGGTTGATCAAAACCTTGATTTTTGAAACTGATTTTTGGGGAATT
TTTTTTTACAGATTAATTCGGTTCGATTTTGTAAATCAAGATCGGACGAA
TAGGAGGTAGAAAAGATGGAATCACATGATGAAACTGGATGCCAAGCTCC
AGAAGGCCCCATTCTTTGCGTCAACAATTGTGGCTTCTTCGGAAGTGCTG
CTACCATGAATATGTGTTCCAAGTGCCACAAGGCCATGATCCTTAATCAG
GAACAGGCCCAACTAGCAGCTTCATCTATTGGGAGCATTGTGCATGGCAG
CTCCGGTGGGACTGGCAAGGAGCCCATCATTGCTGGCAGCGTGGATCTAC
AAGTGGGACCAGTTGAGATAAAGAAATTCTCCATGGAACCATCTAGTGGT
TCTTCCTTTGGCTTCGCAGGAGTGAAAGCAAAGGAAGGCCCTAAAAGGTG
TACAACTTGCAATAAACGTGTCGGTTTGACAGGGTTCAATTGCAGATGTG
GGAACCTCTTCTGTGCAGTTCACCGATACTCTGACAAGCATGGCTGTCCG
TTTGATTATAGGACTGCTGCTCGGGAAGCAATTGCTAAAGCCAACCCTGT
CGTGAAGGCGGAGAAACTTGACAAAATCTAGAAGTGATGAACTGAAGGTT
TATGCAAAGAATATGATGCTTTTCTTTTTANGCACGCATGATATAAGTTG
GTTTCTTGTCTGGTTAGATGTCCTTTATTGGTATAAATGGTTTCAGGTCA
TGATTTTCAGGACATCATTGCAGTTATATTCCTTGCTGATTGGCAAGGAT
TCCCTTGTTGGCTCCATTGGGTAAGTCTCTATTTGTGCCTGGGTTTTGAA
GGACCACTTTTGTGGGTAATTTGAAATATGGCTTCTGGTGGGGAAGGCTT
TTCTTTGGAAGAATAAAAGGAAGGAAAAAAAAAATCGGTAATTTGCCGTG
GG
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