DY258873

Overview
NameDY258873
Unique NameDY258873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length841
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHB14_HUMAN (17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 53/197 (26.90%), Postives = 91/197 (46.19%), Query Frame = 1
Query:   37 YVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDED----LEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            ++ CDVT E  +K  + +T+   G+LD + NNAG       R  +     F ++L +N+ G +   K A   +  ++ G+++                Y   K AV  +TK  A++   +G+RVNC+SP  + TPL      +  +      EG +       G   +  ++  AA++LAS EA + +G  L + GG
Sbjct:   58 FILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAG-HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRATIREGMLAQPLGRMG---QPAEVGAAAVFLAS-EANFCTGIELLVTGG 248          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_BUCAP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 49/172 (28.49%), Postives = 83/172 (48.26%), Query Frame = 1
Query:  112 LDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLR----TEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +DI+ NNAGI   N    + N+  ++E V+ +N+T VF   K   R MI  R G I+                Y  +K  ++G  K+ A+E+ Q GI VN +SP  + T L  +                 +L  + ++     E+IA A ++L+S++A Y++G  + ++GG
Sbjct:   80 IDILINNAGITSDNLLVYMSNK--EWENVIKINLTSVFYMSKSVIRSMIKKRYGRIVTIGSVIGYLGNRGQINYSASKSGLIGFHKSLALEVAQKGITVNIVSPGFIKTNLTKNL---------NVFQYKKHLSKIPMKRIGTAEEIANAVIFLSSEKASYITGQTIHVNGG 240          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 55/197 (27.92%), Postives = 90/197 (45.69%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARS-GSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSF---VGITDEDLE---GFMNSAANLK-GVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            DV+ +   +  +   V   G+LD+M NNAG+     T I++  + +  ++ ++NV G   GI+ AA   I  +S G I+                Y   KH+V   T+ AA EL   GI VN   P    T +       +   D+ LE    F   ++ +K G      D+A    +LAS+++ Y++G ++  DGG
Sbjct:   59 DVSKKKEQEELVQFAVTEFGQLDVMVNNAGVDAV--TPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSLEIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITGQSILTDGG 253          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BUTA_STAEQ (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=butA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 55/197 (27.92%), Postives = 90/197 (45.69%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARS-GSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSF---VGITDEDLE---GFMNSAANLK-GVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            DV+ +   +  +   V   G+LD+M NNAG+     T I++  + +  ++ ++NV G   GI+ AA   I  +S G I+                Y   KH+V   T+ AA EL   GI VN   P    T +       +   D+ LE    F   ++ +K G      D+A    +LAS+++ Y++G ++  DGG
Sbjct:   59 DVSKKKEQEELVQFAVTEFGQLDVMVNNAGVDAV--TPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSLEIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITGQSILTDGG 253          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: HDHA_CLOSO (NADP-dependent 7-alpha-hydroxysteroid dehydrogenase OS=Clostridium sordellii PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 57/206 (27.67%), Postives = 94/206 (45.63%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTR-IIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSA-ANLKGVTLRTEDIAYAAL-YLASDEAKYVSGHNLFIDGGFTIVNPSLGMF 648
            V  D  N    K  ID  +   GK+DI+ NN G G   K   +++ ++  F  + + NV  V+   K     MI  + GSI+                Y  +K  V  +TK  A++  ++GIR N + P  +AT  A +   + DE  + F++    N  G     EDIA + L ++ S+++ Y++G  L + GG+ +  P    F
Sbjct:   60 VFFDAYNIDIYKEMIDTIIKNEGKIDILVNNFGTGRPEKDLDLVNGDEDTFFELFNYNVGSVYRLSKLIIPHMIENKGGSIVNISSVGGSIPDISRIGYGVSKSGVNNITKQIAIQYAKYGIRCNAVLPGLIATDAAMN--SMPDEFRKSFLSHVPLNRIG---NPEDIANSVLFFVPSEDSSYITGSILEVSGGYNLGTPQYAEF 260          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 54/200 (27.00%), Postives = 88/200 (44.00%), Query Frame = 1
Query:   28 NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIV 627
            N   +  +VTN   I+  +       G +DI+ NNAGI   N    +  E  ++  ++  N+T +F   K   R M+  R G I+                Y  AK  V+G TK+ A E+   G+ VN ++P  + T +  +   + DE     +       G      +IA A  +LAS EA Y++G  L ++GG  ++
Sbjct:   52 NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEE--EWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA---LNDEQRTATLAQVP--AGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYMI 244          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.591e-12
Identity = 51/193 (26.42%), Postives = 91/193 (47.15%), Query Frame = 1
Query:   46 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            CDV+ E+ I++   +     G +D + N+AGI       ++     D   +LSVN+ G     K A R MI  + G+I+                Y  +K  ++G +K+ A E+ +  IRVN ++P  + T +    +G+ ++ L   +       G     E++A + L+L   E+ Y++GH L +DGG  +
Sbjct:   54 CDVSKENEIQDTFKEITNNLGNVDYLVNSAGI--RRDALLLRTRSEDIRSLLSVNLVGTIQTCKLALRSMIQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMT---LGLEEDSLTKMVP-----LGRFGDPEEVAQSVLFLL--ESPYITGHVLVVDGGLQL 234          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: YLX6_SCHPO (Uncharacterized oxidoreductase C922.06 OS=Schizosaccharomyces pombe GN=SPAC922.06 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12
Identity = 53/205 (25.85%), Postives = 89/205 (43.41%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLK-----GVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIVNPSL 639
            +  DV+    I+ AI++ + T G +D++ NNAG+        + +E  D +  +S+ + G +L  ++    M     G  +                Y  AK  +  LTK  AV  G  GIRVN  +P  + +P         DE  +   +    +K     G     ED+A A ++LA  +  +++G  L++DGG    NP L
Sbjct:   50 LQADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHD--VSLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYLGSPAYSAAKAGLENLTKALAVRYGPLGIRVNVCAPGTIWSPA-------WDERFKKHPDVGDRMKRWYPVGRLGTPEDVARAVIFLADSKNSFITGTTLYVDGGLLAGNPCL 245          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: IDNO_ECOLI (Gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=idnO PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12
Identity = 52/194 (26.80%), Postives = 95/194 (48.97%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFM--NSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            +VT++  I  A++      G +D++ NNAGI    +    +  + ++  V++VN T VFL  +   R M+  ++G ++                Y  +K AV  LT+   VEL +  I+VN ++P    T +  + V   DE    ++   + A   G     +++  AA++L+S  + +V+GH LF+DGG  +
Sbjct:   66 NVTHKHEIDAAVEHIEKDIGPIDVLVNNAGI--QRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALV--EDEAFTAWLCKRTPAARWG---DPQELIGAAVFLSSKASDFVNGHLLFVDGGMLV 252          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: IDNO_ECOL6 (Gluconate 5-dehydrogenase OS=Escherichia coli O6 GN=idnO PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12
Identity = 52/194 (26.80%), Postives = 95/194 (48.97%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFM--NSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            +VT++  I  A++      G +D++ NNAGI    +    +  + ++  V++VN T VFL  +   R M+  ++G ++                Y  +K AV  LT+   VEL +  I+VN ++P    T +  + V   DE    ++   + A   G     +++  AA++L+S  + +V+GH LF+DGG  +
Sbjct:   66 NVTHKHEIDAAVEHIEKDIGPIDVLVNNAGI--QRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALV--EDEAFTAWLCKRTPAARWG---DPQELIGAAVFLSSKASDFVNGHLLFVDGGMLV 252          
The following BLAST results are available for this feature:
BLAST of DY258873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
DHB14_HUMAN4.186e-1326.9017-beta-hydroxysteroid dehydrogenase 14 OS=Homo sa... [more]
FABG_BUCAP5.467e-1328.493-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
BUTA_STAES5.467e-1327.92Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
BUTA_STAEQ5.467e-1327.92Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
HDHA_CLOSO1.218e-1227.67NADP-dependent 7-alpha-hydroxysteroid dehydrogenas... [more]
FABG_VIBCH1.218e-1227.003-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
CBR4_XENTR1.591e-1226.42Carbonyl reductase family member 4 OS=Xenopus trop... [more]
YLX6_SCHPO2.077e-1225.85Uncharacterized oxidoreductase C922.06 OS=Schizosa... [more]
IDNO_ECOLI2.077e-1226.80Gluconate 5-dehydrogenase OS=Escherichia coli (str... [more]
IDNO_ECOL62.077e-1226.80Gluconate 5-dehydrogenase OS=Escherichia coli O6 G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258873 ID=DY258873; Name=DY258873; organism=Citrus clementina; type=EST; length=841bp
TCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCCATTGCGA
TGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACCGTTGCAA
CTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGGCGGCGCT
AACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGCGTGTCCT
GAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCTGCTCGTG
TCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAGCGTTAGC
TCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAAAACATGC
TGTTTTAGGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAATTTGGGA
TTAGGGTGAATTGCTTGTCACCTTATGCTCTTGCAACACCTTTGGCTACC
AGTTTTGTTGGGATTACCGATGAGGATCTGGAAGGTTTTATGAATTCAGC
GGCTAACCTTAAGGGTGTGACTTTAAGGACCGAAGATATTGCATATGCAG
CTCTTTATCTAGCGAGTGATGAGGCGAAGTATGTGAGTGGACACAATCTT
TTCATTGACGGAGGTTTCACTATTGTCAATCCCTCCCTCGGAATGTTTCA
GTACCCAGATTCTTGATCGAGTTAGTTAATTTCATCAAGGTTTTTTCCCA
TTTGAGTGGGGAAAAAAAAAACTCTGTTCAAATAATTTCATATTTGATCC
TTGATATCGAATGAAACAAAATTGAACAAGTTTTTTTTCATTCCTAGACT
CCTTAAAAAAGAAATTATTTCCAAAACGAAACCTTGAGTTT
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