DY258875

Overview
NameDY258875
Unique NameDY258875
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1058
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_LEGPN (Inorganic pyrophosphatase OS=Legionella pneumophila GN=ppa PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 5.163e-25
Identity = 63/169 (37.28%), Postives = 94/169 (55.62%), Query Frame = 2
Query:  290 DLEIGPGAPKIFNCVIEIGK-GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKK-NENKEVAVNDFLPASDAYNSVQQSMNLY 784
            ++  G   P   N +IEI   G  VKYE+DKK+G + VDR + +++ YP NYG+IP TL ED DP+DVL+I   P++ G  +  +A+G++ M D+   D KI+AV        Y+     +++P H L  I  FF+ YK   E K V V  ++    A   +  S+N Y
Sbjct:    5 EIPSGRDVPNEVNVIIEIPMHGEPVKYEVDKKTGALFVDRFMTTAMFYPTNYGYIPNTLSEDGDPVDVLVITPVPLISGAVISCRAVGMLKMTDESGVDAKILAVPTTKLSKMYQSMQTYQDIPQHLLLSIEHFFKHYKDLEEGKWVKVEGWVGPDAAREEITSSINRY 173          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_RALSO (Inorganic pyrophosphatase OS=Ralstonia solanacearum GN=ppa PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.808e-25
Identity = 61/171 (35.67%), Postives = 100/171 (58.48%), Query Frame = 2
Query:  284 WHDLEIGPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            ++++  G   P  FN +IEI  +   VKYE DK++GL+ VDR + + + YP NYGFIP+TL  D DP+DVL++   P++ GC +R + +G++ M D+  +D K++AV  +   P   H  D+ ++  + L +I+ FFE YK  E  K V V  +    +A+  +   +  Y
Sbjct:    3 FNNVSPGKDIPNDFNVIIEIPAQSDPVKYEADKETGLLHVDRFVGTGMRYPANYGFIPQTLAGDGDPVDVLVVTPFPLVHGCVVRCRTLGMLKMTDESGQDAKLVAVPVNKLSPATAHMTDLSDIGQNLLDQIKHFFEQYKALEPGKWVKVEGWGGIEEAHKEIVDGVANY 173          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_COREF (Inorganic pyrophosphatase OS=Corynebacterium efficiens GN=ppa PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.709e-24
Identity = 54/124 (43.55%), Postives = 78/124 (62.90%), Query Frame = 2
Query:  335 IEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE 706
            +EI KGS+ KYE+D ++G + +DR L++ + YP +YGFI  TL ED DP+D L+I+ E V P   ++++ IG+  M D+   DDK++AV  DDP Y H  DI ++      EI  FF  YK  E
Sbjct:    7 VEIPKGSRNKYEIDHETGKVYLDRYLFTPMAYPLDYGFIDHTLGEDGDPMDALVILPESVFPNVIVKSRVIGVFKMTDEAGGDDKLLAV-LDDPRYDHIQDISDVSDFLKDEIEHFFVHYKDLE 129          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_BRAJA (Inorganic pyrophosphatase OS=Bradyrhizobium japonicum GN=ppa PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.709e-24
Identity = 59/142 (41.55%), Postives = 89/142 (62.68%), Query Frame = 2
Query:  293 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIK---ELPPHRLAEIRRFFEDYKKNE 706
            + IG   P+  N +IE+  G + +KYE+DK++G ++VDR LY+ + YP NYGFIP TL +D DP DVLII    ++PG  +  + +G++ M D+   D+KI+AV +     R Y+ +K   +LP   L +I+ FFE YK  E
Sbjct:    6 ISIGKNVPQDVNVIIEVPVGGEPIKYEMDKEAGTLVVDRFLYTPMRYPGNYGFIPHTLSDDGDPCDVLIINTRAIIPGAVMSVRPVGVLFMEDEAGGDEKILAVPSSKLTQR-YDKVKSYSDLPDITLQQIQHFFEHYKDLE 146          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_MYCPU (Inorganic pyrophosphatase OS=Mycoplasma pulmonis GN=ppa PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 7.456e-24
Identity = 64/154 (41.56%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  335 IEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVA-VNDFLPASDAYNSVQQSMNLYADY 793
            IEI K S +KYE D+K G I+VDR+L     YP NYG++   L  D D LDVL+  QE  LPG  L A+ +G M MID GE D K+IAV  DD    +   +++L    L EI+ FF +YK  +   +  V+ F   S A    Q+  +L  +Y
Sbjct:    8 IEIQKDSNIKYEYDRKRGKIVVDRILRGDFRYPANYGYLEDALDWDGDELDVLVYSQEKFLPGTSLNARIVGAMKMIDDGETDTKLIAVHDDDYRLENIKALEDLDSKWLEEIKYFFSNYKNWKRPGITKVSGFENTSWALKEYQECKDLMREY 161          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_CORGL (Inorganic pyrophosphatase OS=Corynebacterium glutamicum GN=ppa PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.833e-23
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 2
Query:  335 IEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE 706
            +EI KGS+ KYE+D ++G + +DR L++ + YP +YG+I  TL ED DPLD L+I+ E V P   ++++ IG+  M D+   DDK+++V  DDP Y H  DI ++      EI  FF  YK  E
Sbjct:    7 VEIPKGSRNKYEIDHETGKVYLDRYLFTPMAYPLDYGYIDHTLGEDGDPLDALVILPESVFPAVVVKSRIIGVFKMTDEAGGDDKLLSV-LDDPRYDHIQDISDVSDFLKDEIEHFFVHYKDLE 129          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR1_PSESM (Inorganic pyrophosphatase 1 OS=Pseudomonas syringae pv. tomato GN=ppa1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.833e-23
Identity = 65/166 (39.16%), Postives = 93/166 (56.02%), Query Frame = 2
Query:  302 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKE---LPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            G   P      IEI    + +KYE+DK +  + VDR + + + YP NYGFIP TL +D DPLDVL++   PV PG  +RA+ +G++ M D G  D K+IAV   D   + Y D+KE   LP   L +I+ FFE+YK  E  K V +  +  A  A   + +S+  +
Sbjct:    9 GKDLPNDIYVAIEIPANHAPIKYEIDKDTDCLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVTPGSVIRARPVGILHMTDDGGGDAKVIAV-PHDKLSQLYVDVKEYTDLPALLLEQIKHFFENYKDLEKGKWVKIEGWGNADAARAEIMKSVEAF 173          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_RHILO (Inorganic pyrophosphatase OS=Rhizobium loti GN=ppa PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.077e-22
Identity = 54/138 (39.13%), Postives = 84/138 (60.87%), Query Frame = 2
Query:  302 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYN--DIKELPPHRLAEIRRFFEDYKKNE 706
            G   P+  N +IE+  G + +KYE+DK++G + VDR L++S+ YP NYGF+P TL  D DP+DVL+     ++PGC +  + IG++ M D   +D+K+IAV +     R+ N  +   LP     +++ FFE YK  E
Sbjct:    9 GKNPPEDVNVIIEVPIGGEPIKYEMDKEAGTLFVDRFLHTSMRYPGNYGFVPHTLSGDGDPIDVLVCNTRALVPGCVINVRPIGVLVMEDNAGQDEKVIAVPSPKLTLRYENVTEYTHLPEITRQQVQHFFEHYKDLE 146          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_VIBCH (Inorganic pyrophosphatase OS=Vibrio cholerae GN=ppa PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.406e-22
Identity = 60/166 (36.14%), Postives = 94/166 (56.63%), Query Frame = 2
Query:  287 HDLEIGPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNEN-KEVAVNDFLPASDAYNSVQQS 772
            +++  G   P     VIEI      +KYE+DK+SG + VDR + + + YP NYG++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE YK+ E+ K V V+ +  A+ A   +  S
Sbjct:    4 NNVPAGKSLPDDIYVVIEIPANADPIKYEVDKESGAVFVDRFMSAPMFYPCNYGYVNHTLSLDGDPVDVLVPTPYPLIPGSVIRCRPVGVLKMTDESGEDAKVVAVPHTKISKEYDHIQDVNDLPALLKAQITHFFERYKELESGKWVKVDGWEDAASARAEILSS 169          
BLAST of DY258875 vs. ExPASy Swiss-Prot
Match: IPYR_PSEPK (Inorganic pyrophosphatase OS=Pseudomonas putida (strain KT2440) GN=ppa PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.836e-22
Identity = 65/166 (39.16%), Postives = 92/166 (55.42%), Query Frame = 2
Query:  302 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKE---LPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 784
            G   P      IEI    + +KYE+DK S  + VDR + + + YP NYGFIP TL +D DPLDVL++   PV PG  +RA+ +G++ M D G  D K+IAV   D   + Y D+KE   LP   + +I  FF +YK  E  K V +  +  A  A  ++ +S+  Y
Sbjct:    9 GKDLPNDIYVAIEIPANHAPIKYEIDKDSDTLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVAPGSVIRARPVGVLNMTDDGGGDAKVIAV-PHDKLSQLYVDVKEYTDLPALLIQQIEHFFANYKDLEKGKWVKIEGWEGADAARAAITKSVAAY 173          
The following BLAST results are available for this feature:
BLAST of DY258875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
IPYR_LEGPN5.163e-2537.28Inorganic pyrophosphatase OS=Legionella pneumophil... [more]
IPYR_RALSO8.808e-2535.67Inorganic pyrophosphatase OS=Ralstonia solanacearu... [more]
IPYR_COREF5.709e-2443.55Inorganic pyrophosphatase OS=Corynebacterium effic... [more]
IPYR_BRAJA5.709e-2441.55Inorganic pyrophosphatase OS=Bradyrhizobium japoni... [more]
IPYR_MYCPU7.456e-2441.56Inorganic pyrophosphatase OS=Mycoplasma pulmonis G... [more]
IPYR_CORGL2.833e-2342.74Inorganic pyrophosphatase OS=Corynebacterium gluta... [more]
IPYR1_PSESM4.833e-2339.16Inorganic pyrophosphatase 1 OS=Pseudomonas syringa... [more]
IPYR_RHILO1.077e-2239.13Inorganic pyrophosphatase OS=Rhizobium loti GN=ppa... [more]
IPYR_VIBCH1.406e-2236.14Inorganic pyrophosphatase OS=Vibrio cholerae GN=pp... [more]
IPYR_PSEPK1.836e-2239.16Inorganic pyrophosphatase OS=Pseudomonas putida (s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258875 ID=DY258875; Name=DY258875; organism=Citrus clementina; type=EST; length=1058bp
GTTCTCTTGCTTTCTCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTA
ATATCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTG
TGGTCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTG
AACCGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTC
CTGTCTCCCAACCTCCAGCACATCCTCCGCTTAACGAAAGGATACTTTCT
TCAATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGAT
TGGACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAG
GGAGCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTT
GATCGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCAT
ACCTCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCA
TGCAGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATTGGA
CTCATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGT
CTGTGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTC
CACCACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGAAA
AATGAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCAGCCTCTGATGC
CTATAATTCAGTCCAGCAGTCTATGAACCTCTATGCTGACTATATTGTGG
AGAGCTTGAGGCGGTAGTCGTTTGATCACCTGAGTGATAGATTCCGTCGT
GGGATGTTTCATACAGATATTGGTGTGGTTACCTATACAAGTTCCTTTTA
TCATTACAAGAAACTCTATTTTCTCCTTGCATGGACGCCCCAAGGTTTCT
TCCAATGGCTGGCCTAATTTGTGGCATTTTTCTGGGTTAATTGACCTACT
ACTGGCTACCCCCCGGGGAAACTGGGAGGAAGGGGTTTTGGAAGGGCCAA
AAAATTTT
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