DY258881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DBP2_USTMA (ATP-dependent RNA helicase DBP2 OS=Ustilago maydis GN=DBP2 PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 5.887e-35 Identity = 84/224 (37.50%), Postives = 128/224 (57.14%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-PLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+ L+LAPTRELA Q++ E + S L T VYGG P Q+R L G + + TPGR+ID++ NL V ++V+DEAD+ML +GF + IL+++ +RQ +MFSAT P ++ L +L N V+ +G ++ + + + T +K +IG L T A+ GK I+FT TKR AD L + + + +HGD Q +R+ L+ F+ GR Sbjct: 204 PIALILAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQIRDLQRGAEICIATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPKEVQRLAGDFLNNYAQVN-IGSTELAANHNVKQIIEVCTEFEKKGKLIGHLETISAENGKVIIFTSTKRVADDLTKFLRQDGWPALAIHGDKQQQERDWVLAEFKSGR 426
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: Y802_STAS1 (Probable DEAD-box ATP-dependent RNA helicase SSP0802 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0802 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.689e-35 Identity = 86/225 (38.22%), Postives = 139/225 (61.78%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESAP--SLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP-QNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGD--SDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFN 671 L+LAPTRELA QV + A ++ + V+GG PI Q++AL G VVGTPGRVID + R L +++ ++LDEAD+M+++GF +D++ I++++P + RQ M+FSATMP I++L +++K+P+ V + + SD ++ + Y+I + EK + H + IVF +TKR D L A+ +K Y E LHGDI+Q++R L F++ + + Sbjct: 73 LILAPTRELAMQVAESLKAFAKGQNIQVVTVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMKFIMDKIPAEQRQTMLFSATMPKAIQTLVQQFMKSPVIVKTMNNEMSDPQIEE---YYTIVKEL-EKFDTFTSFLDVH-QPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQLD 292
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: RH30_ORYSJ (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica GN=Os01g0911100 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.312e-34 Identity = 79/223 (35.43%), Postives = 133/223 (59.64%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGR 665 P+ L+LAPTRELA Q+++E + S + C+YGG P Q+R L GV+ V+ TPGR+ID+++ NL V ++VLDEAD+ML +GF + I+ ++ +RQ + +SAT P + SL ++L+NP V ++G D K I S +EK + +L+++ G + ++F QTK+D D++ + + +HGD +Q++R+ L+ F+ G+ Sbjct: 325 PIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKV-IIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGK 546
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: Y2316_STAA8 (Probable DEAD-box ATP-dependent RNA helicase SAOUHSC_02316 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02316 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.713e-34 Identity = 86/225 (38.22%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ-NRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGD--SDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFN 671 L+LAPTRELA QV ++ E + + + V+GG PI Q++AL G VVGTPGRVID + R L + ++LDEAD+M+++GF +D+ I++++P RQ M+FSATMP I++L +++K+P + + + SD ++ + Y+I + EK + H + IVF +TKR D L A+ +K Y E LHGDI+Q++R L F++ + N Sbjct: 73 LILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEE---FYTIVKEL-EKFDTFTNFLDVH-QPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIN 292
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: Y2168_STAAR (Probable DEAD-box ATP-dependent RNA helicase SAR2168 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2168 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.713e-34 Identity = 86/225 (38.22%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ-NRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGD--SDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFN 671 L+LAPTRELA QV ++ E + + + V+GG PI Q++AL G VVGTPGRVID + R L + ++LDEAD+M+++GF +D+ I++++P RQ M+FSATMP I++L +++K+P + + + SD ++ + Y+I + EK + H + IVF +TKR D L A+ +K Y E LHGDI+Q++R L F++ + N Sbjct: 73 LILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEE---FYTIVKEL-EKFDTFTNFLDVH-QPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIN 292
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: Y2081_STAAM (Probable DEAD-box ATP-dependent RNA helicase SAV2081 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2081 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.713e-34 Identity = 86/225 (38.22%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ-NRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGD--SDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFN 671 L+LAPTRELA QV ++ E + + + V+GG PI Q++AL G VVGTPGRVID + R L + ++LDEAD+M+++GF +D+ I++++P RQ M+FSATMP I++L +++K+P + + + SD ++ + Y+I + EK + H + IVF +TKR D L A+ +K Y E LHGDI+Q++R L F++ + N Sbjct: 73 LILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEE---FYTIVKEL-EKFDTFTNFLDVH-QPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIN 292
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: Y2072_STAAC (Probable DEAD-box ATP-dependent RNA helicase SACOL2072 OS=Staphylococcus aureus (strain COL) GN=SACOL2072 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.713e-34 Identity = 86/225 (38.22%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ-NRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGD--SDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFN 671 L+LAPTRELA QV ++ E + + + V+GG PI Q++AL G VVGTPGRVID + R L + ++LDEAD+M+++GF +D+ I++++P RQ M+FSATMP I++L +++K+P + + + SD ++ + Y+I + EK + H + IVF +TKR D L A+ +K Y E LHGDI+Q++R L F++ + N Sbjct: 73 LILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEE---FYTIVKEL-EKFDTFTNFLDVH-QPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIN 292
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: Y2037_STAA3 (Probable DEAD-box ATP-dependent RNA helicase SAUSA300_2037 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2037 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.713e-34 Identity = 86/225 (38.22%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ-NRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGD--SDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFN 671 L+LAPTRELA QV ++ E + + + V+GG PI Q++AL G VVGTPGRVID + R L + ++LDEAD+M+++GF +D+ I++++P RQ M+FSATMP I++L +++K+P + + + SD ++ + Y+I + EK + H + IVF +TKR D L A+ +K Y E LHGDI+Q++R L F++ + N Sbjct: 73 LILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEE---FYTIVKEL-EKFDTFTNFLDVH-QPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIN 292
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: Y2004_STAAW (Probable DEAD-box ATP-dependent RNA helicase MW2004 OS=Staphylococcus aureus (strain MW2) GN=MW2004 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.713e-34 Identity = 86/225 (38.22%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ-NRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGD--SDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFN 671 L+LAPTRELA QV ++ E + + + V+GG PI Q++AL G VVGTPGRVID + R L + ++LDEAD+M+++GF +D+ I++++P RQ M+FSATMP I++L +++K+P + + + SD ++ + Y+I + EK + H + IVF +TKR D L A+ +K Y E LHGDI+Q++R L F++ + N Sbjct: 73 LILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEE---FYTIVKEL-EKFDTFTNFLDVH-QPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIN 292
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: Y1985_STAAS (Probable DEAD-box ATP-dependent RNA helicase SAS1985 OS=Staphylococcus aureus (strain MSSA476) GN=SAS1985 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.713e-34 Identity = 86/225 (38.22%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ-NRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGD--SDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFN 671 L+LAPTRELA QV ++ E + + + V+GG PI Q++AL G VVGTPGRVID + R L + ++LDEAD+M+++GF +D+ I++++P RQ M+FSATMP I++L +++K+P + + + SD ++ + Y+I + EK + H + IVF +TKR D L A+ +K Y E LHGDI+Q++R L F++ + N Sbjct: 73 LILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEE---FYTIVKEL-EKFDTFTNFLDVH-QPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIN 292 The following BLAST results are available for this feature:
BLAST of DY258881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258881 ID=DY258881; Name=DY258881; organism=Citrus clementina; type=EST; length=671bpback to top |