DY258881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: CSHA_BACCZ (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ZK / E33L) GN=cshA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 80/219 (36.53%), Postives = 129/219 (58.90%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDG 662 +V+APTRELA QV +E ++ + + +YGG I+ Q+RAL +VGTPGR++D I R L L V+ VVLDEAD+ML++GF ED+E IL +P+ Q ++FSATMP IR + +++ P + + + + I + + +K ++ +L+ + IVF +TKR D L+ A+ + Y E +HGD++Q++R L F++G Sbjct: 74 IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEG 289
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: CSHA_BACCR (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cshA PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 80/219 (36.53%), Postives = 129/219 (58.90%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDG 662 +V+APTRELA QV +E ++ + + +YGG I+ Q+RAL +VGTPGR++D I R L L V+ VVLDEAD+ML++GF ED+E IL +P+ Q ++FSATMP IR + +++ P + + + + I + + +K ++ +L+ + IVF +TKR D L+ A+ + Y E +HGD++Q++R L F++G Sbjct: 74 IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEG 289
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: CSHA_BACC1 (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 10987) GN=cshA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 80/219 (36.53%), Postives = 129/219 (58.90%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDG 662 +V+APTRELA QV +E ++ + + +YGG I+ Q+RAL +VGTPGR++D I R L L V+ VVLDEAD+ML++GF ED+E IL +P+ Q ++FSATMP IR + +++ P + + + + I + + +K ++ +L+ + IVF +TKR D L+ A+ + Y E +HGD++Q++R L F++G Sbjct: 74 IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEG 289
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: CSHA_BACAN (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus anthracis GN=cshA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 80/219 (36.53%), Postives = 129/219 (58.90%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDG 662 +V+APTRELA QV +E ++ + + +YGG I+ Q+RAL +VGTPGR++D I R L L V+ VVLDEAD+ML++GF ED+E IL +P+ Q ++FSATMP IR + +++ P + + + + I + + +K ++ +L+ + IVF +TKR D L+ A+ + Y E +HGD++Q++R L F++G Sbjct: 74 IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEG 289
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: CSHA_BACAH (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis (strain Al Hakam) GN=cshA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 80/219 (36.53%), Postives = 129/219 (58.90%), Query Frame = 3 Query: 15 LVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDG 662 +V+APTRELA QV +E ++ + + +YGG I+ Q+RAL +VGTPGR++D I R L L V+ VVLDEAD+ML++GF ED+E IL +P+ Q ++FSATMP IR + +++ P + + + + I + + +K ++ +L+ + IVF +TKR D L+ A+ + Y E +HGD++Q++R L F++G Sbjct: 74 IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEG 289
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DED1_MAGGR (ATP-dependent RNA helicase DED1 OS=Magnaporthe grisea GN=DED1 PE=3 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32 Identity = 86/229 (37.55%), Postives = 134/229 (58.52%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL--ERLP--QNRQGMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGR 665 P L+LAPTREL Q+ E + A + VYGG I Q+R ++ G D +V TPGR++DLI+R ++L ++++VLDEAD+ML +GF + I+ E +P Q+RQ +MFSAT P +I+ L +LK+ L+V VG + + + + +K S + L++ H GG ++F +TKR+AD L+ + ++ +HGD +Q +RER L FR GR Sbjct: 275 PTSLILAPTRELVSQIYDESRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPNVQDRQTLMFSATFPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRV---MEVKHRDDKISHLLDLLSTHG-GGLTLIFVETKRNADELSDFLQNQNLPATSIHGDRTQRERERALEMFRTGR 499
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DDX5_PONAB (Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii GN=DDX5 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+CLVLAPTRELA+QV++ E A L + C+YGG P Q+R L+ GV+ + TPGR+ID ++ NL ++VLDEAD+ML +GF + I++++ +RQ +M+SAT P +R L +LK+ + ++ +G + I EK + +L+ E K K IVF +TKR D L M + + +HGD SQ +R+ L+ F+ G+ Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGK 391
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DDX5_MOUSE (Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus GN=Ddx5 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+CLVLAPTRELA+QV++ E A L + C+YGG P Q+R L+ GV+ + TPGR+ID ++ NL ++VLDEAD+ML +GF + I++++ +RQ +M+SAT P +R L +LK+ + ++ +G + I EK + +L+ E K K IVF +TKR D L M + + +HGD SQ +R+ L+ F+ G+ Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGK 391
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DDX5_HUMAN (Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens GN=DDX5 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+CLVLAPTRELA+QV++ E A L + C+YGG P Q+R L+ GV+ + TPGR+ID ++ NL ++VLDEAD+ML +GF + I++++ +RQ +M+SAT P +R L +LK+ + ++ +G + I EK + +L+ E K K IVF +TKR D L M + + +HGD SQ +R+ L+ F+ G+ Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGK 391
BLAST of DY258881 vs. ExPASy Swiss-Prot
Match: DDX17_MOUSE (Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus GN=Ddx17 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32 Identity = 82/225 (36.44%), Postives = 128/225 (56.89%), Query Frame = 3 Query: 6 PLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQGMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIPLYSIATSMYEKPSIIGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 665 P+CLVLAPTRELA+QV++ + + L + C+YGG P Q+R L+ GV+ + TPGR+ID ++ NL ++VLDEAD+ML +GF + I++++ +RQ +M+SAT P +R L +L++ ++ VG+ + I EK + QL+ E K K I+F +TKR D L M + + +HGD SQ +R+ L+ FR G+ Sbjct: 166 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGK 389 The following BLAST results are available for this feature:
BLAST of DY258881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258881 ID=DY258881; Name=DY258881; organism=Citrus clementina; type=EST; length=671bpback to top |