DY258885

Overview
NameDY258885
Unique NameDY258885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1168
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig514 contig Ccv1_Contig514:292..1459. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB_VIBCH (Chaperone protein clpB OS=Vibrio cholerae GN=clpB PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 7.367e-84
Identity = 172/368 (46.74%), Postives = 238/368 (64.67%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI-------------TKEKNEAVRGQDF-EKAGELRDREMDLKAQISAL-----VDKGKEMSKAETE----AGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGSN 940
            RYE+HH +  TD A+V+AA LS++YISDR LPDKAIDLIDEA S +R++    PE   +LE+++ Q+               EK  A+  ++  EK  +  + E   KA+ +AL     +    E ++ + E    AGD+  +                                VT+ +I  ++S  TGIPV K+   E ++LL+ME+ LHKRVIGQ EAV+ ++ AIRR+R GL +PNRPI SF+F GPTGVGK+EL K LA + F SE+AM+R+DMSEFME+H+V++L+G+PPGYVGY EGG LTEAVRR+PY+V+L DE+EKAHPDVF+++L  L+DGRLT+ +GR VDF+ T   MTSN+GS+
Sbjct:  356 RYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSS 723          
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB_CLOTE (Chaperone protein clpB OS=Clostridium tetani GN=clpB PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 7.367e-84
Identity = 175/371 (47.17%), Postives = 233/371 (62.80%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK------AQISALVDKGKE------------------MSKAETEAGDVGPV----------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGSN 940
            R+EIHH +R  D A+V+AA+LS +YI+DR+LPDKAIDLIDEAG+ +R     LP E   +++++ Q+  EK    + +D      L D E +L        +++A  +K KE                  + KAE E  D+  V                                  VTE +I  I+S WTGIPV K+   E D+LL++E+ L  RVIGQDEAV+A+S A+ RAR G+K+P +PI SFIF GPTGVGK+ELAK L    F SEE +IR+DMSE+ME+++VS+LIG+PPGYVGY EGGQLTEAVRR+PY+V+LFDEIEKAH DVF++ L  L+DGRLT+ KG+ VDF+     MTSN+GS+
Sbjct:  360 RFEIHHGIRIHDSAIVAAAKLSQRYITDRYLPDKAIDLIDEAGAMIRTEIDSLPTELDSIKRKIFQMEIEKEALAKEKDSRSKERLEDLEKELSNLKEKDKEMTAKYEKEKEQIINMRNLKQKLDEVKGQLEKAEREY-DLNKVAELKYGIIPGIKSQIEEKEILIKENSQGNMLKEEVTENEISKIISHWTGIPVTKLIEGEKDKLLRLEDELKSRVIGQDEAVEAVSNAVLRARAGMKDPQKPIGSFIFLGPTGVGKTELAKTLCKNLFDSEENIIRIDMSEYMEKYSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDFKNCIIIMTSNIGSS 729          
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 7.367e-84
Identity = 177/376 (47.07%), Postives = 242/376 (64.36%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL------------------------------------RHAQLPEEARELEKELR----------------QITKEKNEAVRGQ--------DFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGS 937
            RYE+HH +  TD A+V+AA+LS++YI+DRFLPDKAIDLIDEAG+R+R+                                    R A + EE  +L++E                  Q  KE+ + VR +         F+K  EL+  ++ +L+A++ A      E    E+++G    + T+V   +I  +VS  TGIPV K+   E D+LL+ME+ LHKRV+GQDEAV+ +S AIRR+R GL +P+RP  SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H+V++LIG+PPGYVGY EGG LTEAVRR+PY+V+L DE+EKAHPDVF+++L  L+DGRLT+ +GR VDF+ T   MTSN+GS
Sbjct:  355 RYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAA--DSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGS 728          
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB_BORPA (Chaperone protein clpB OS=Bordetella parapertussis GN=clpB PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 7.367e-84
Identity = 177/376 (47.07%), Postives = 242/376 (64.36%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL------------------------------------RHAQLPEEARELEKELR----------------QITKEKNEAVRGQ--------DFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGS 937
            RYE+HH +  TD A+V+AA+LS++YI+DRFLPDKAIDLIDEAG+R+R+                                    R A + EE  +L++E                  Q  KE+ + VR +         F+K  EL+  ++ +L+A++ A      E    E+++G    + T+V   +I  +VS  TGIPV K+   E D+LL+ME+ LHKRV+GQDEAV+ +S AIRR+R GL +P+RP  SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H+V++LIG+PPGYVGY EGG LTEAVRR+PY+V+L DE+EKAHPDVF+++L  L+DGRLT+ +GR VDF+ T   MTSN+GS
Sbjct:  355 RYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAA--DSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGS 728          
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB_BORBR (Chaperone protein clpB OS=Bordetella bronchiseptica GN=clpB PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 7.367e-84
Identity = 177/376 (47.07%), Postives = 242/376 (64.36%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL------------------------------------RHAQLPEEARELEKELR----------------QITKEKNEAVRGQ--------DFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGS 937
            RYE+HH +  TD A+V+AA+LS++YI+DRFLPDKAIDLIDEAG+R+R+                                    R A + EE  +L++E                  Q  KE+ + VR +         F+K  EL+  ++ +L+A++ A      E    E+++G    + T+V   +I  +VS  TGIPV K+   E D+LL+ME+ LHKRV+GQDEAV+ +S AIRR+R GL +P+RP  SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H+V++LIG+PPGYVGY EGG LTEAVRR+PY+V+L DE+EKAHPDVF+++L  L+DGRLT+ +GR VDF+ T   MTSN+GS
Sbjct:  355 RYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAA--DSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGS 728          
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 9.621e-84
Identity = 174/371 (46.90%), Postives = 238/371 (64.15%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR-GQD---FEKAGELRD-----------------REMDLKAQISAL----VDKGKEMSKAETEA----------GDVGPVVTEVD------------------------IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGS 937
            +YE +H +R  D A+++AA LS +YI+DRFLPDKAIDLIDEA SR+R+    +P E  E+E+ + Q+  EK   +R  QD    E+  +L D                 RE D+  ++S+L     +K +E  KAE E           G++  +  E+                         +  IVS WTGIPV ++   E+D+L+ ME+ L  RV+GQDEA+  ++ AIRRAR GL +PNRPI SF+F GPTGVGK+E AKALA + F  ++A++R+DMSE+ E+HTV++LIG+PPGYVGY EGGQLTEAVRRRPY++VLFDEIEKAHP+VF+++L  L+DGRLT+ +GR VDF+ T   MTSN+GS
Sbjct:  358 KYENYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEVERRIIQLEIEKQALLRESQDPHSLERLKKLADELEELKAKSAELKGHWQREKDIIGRVSSLRQRLEEKREEAKKAEREGNLARTAEIRYGEIPAIEKEIADRSAELEDIRKEGKMLPEEVDGELVAEIVSRWTGIPVSRMMEGEADKLVHMEDRLITRVVGQDEALVLVANAIRRARSGLSDPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGS 728          
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 1.257e-83
Identity = 183/376 (48.67%), Postives = 240/376 (63.83%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGS---------------------RVRLRHAQLPEEA--------RELEKELRQITK-----------EKNE--------------------AVRGQDFEKAGEL---RDREMDLK-AQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGS 937
            +YE HH +R TD ALV++A LS +YI+DRFLPDKAIDL+DEA +                     R+++    L +E+        + LEKEL ++ +           EKN+                    A R  +F+KAGEL   R  E++ + A I A  + G+ M +A          VT   I  +VS WTG+PV+K+   E D+LLKME++L KRV+GQ EAV A++ A+RR+R GL++PNRP+ SF+F GPTGVGK+EL KALA Y F  E AM+RLDMSE+ME+H+VS+LIG+PPGYVGY EGG LTEAVRRRPY VVLFDEIEKAHPDVF+++L  L+DGRLT+ +GR VDF+ T   MTSN+GS
Sbjct:  358 KYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREIIRLKIEQEALKKESDAGSKSRLQTLEKELVELEEKSASLTARWSAEKNKLSDAQKLKAELDGLRVELANAQRRGEFQKAGELAYGRIPELERQLADIEAKENSGEMMEEA----------VTANHIAQVVSRWTGVPVDKMLEGEKDKLLKMEDSLGKRVVGQAEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGS 723          
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.641e-83
Identity = 176/412 (42.72%), Postives = 253/412 (61.41%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI-----------------------------TKEKNEAVRGQDF-------EKAGELRDREMDLKAQISAL-----VDKGKEMSKAETEAGD--------------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGSNVN*KREGPPLWF*FLIYERRKNANYNQ-ELKILGKLKK 1051
            RYE HH ++ TD AL++AA+LS++YISDRFLPDKAIDLIDEA +++++     P E  +LE+ L Q+                             T ++ +A   Q +       E+ G L++ E  L+ Q++       ++KG E+   + EA                      +   V E DI  IV+ WT IPV+++   E  +LL++E  LH+RVIGQDEAV A++ AIRRAR G+K+P+RPI SF+F GPTGVGK+ELA+ALA   F +E+A+IR DMSE+ME++++S+LIG+PPGY+GY EGGQL+EA+RR PY VVLFDE+EKAHPDVF+++L  L+DGR+T+ +GR +DF      MTSN+GS              F++    + A+ +  ELK+LG L++
Sbjct:  362 RYEGHHGVKITDGALMAAAKLSHRYISDRFLPDKAIDLIDEASAQLKMEITSKPSELEDLERRLLQLEMEQLSLSGENGQASVHSDRLQQIQTELQTLQEQQARLNQQWQQEKQLLEELGRLQEEEETLRQQVNQAEREHDLNKGAELKFGQLEALQQQRQAIEEQIQALHANGQTLLREQVEEADIAEIVARWTNIPVQRLLESERQKLLQLESFLHQRVIGQDEAVVAVAAAIRRARAGMKDPSRPIGSFLFLGPTGVGKTELARALANCLFDAEDALIRFDMSEYMEKNSISRLIGAPPGYIGYEEGGQLSEAIRRHPYAVVLFDEVEKAHPDVFNLLLQVLDDGRITDSQGRTIDFCNAVIVMTSNIGSQ-------------FILEMGEEEASLDAVELKVLGALRQ 760          
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB_VIBPA (Chaperone protein clpB OS=Vibrio parahaemolyticus GN=clpB PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 2.143e-83
Identity = 171/368 (46.47%), Postives = 235/368 (63.86%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI-------TKEKNEAVRGQDFEKAGELRDREMDL----------KAQISALVDKGKEMSKAETE------AGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGSN 940
            RYE+HH +  TD A+V+AA LS++YISDR LPDKAIDLIDEA S +RL+    PE   +LE+++ Q+       + E +EA   +      EL ++E +           KA +S       E+ +A  +      AGD+  +                                VT+ +I  ++S  TGIPV K+   E ++LL+ME+ LH RV+GQ EAV  +S AIRR+R GL +PNRPI SF+F GPTGVGK+EL K LA++ F SE+AM+R+DMSEFME+H+V++L+G+PPGYVGY EGG LTEAVRR+PY+V+L DE+EKAHPDVF+++L  L+DGRLT+ +GR VDF+ T   MTSN+GS+
Sbjct:  356 RYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLQALNDELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQSEAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSS 723          
BLAST of DY258885 vs. ExPASy Swiss-Prot
Match: CLPB_RHOBA (Chaperone protein clpB OS=Rhodopirellula baltica GN=clpB PE=3 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 2.143e-83
Identity = 184/391 (47.06%), Postives = 235/391 (60.10%), Query Frame = 2
Query:    2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV----------------RLR-----HAQLPEEAR--------ELEKELRQITKE---------------------------------------KNEAVRGQDFEKAG----ELRDREMDLKAQISALVDKGKEMSKAETEAGD-----VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFHMMLSNLEDGRLTNRKGRIVDFQITPSNMTSNVGSNV 943
            RYE HH +R TD ALV+AA LS +YI+DRFLPDKAIDLIDEA SR+                RLR     H QL +E          E+E+E+     E                                       K + +RG+  E A     +++ R  +L+A+I           + + E GD     +   VTE +I  +VS WTG+PV ++   E  +LL MEE LH+RV+GQDEAV A+S A+RR+R GL++PNRPI SF+F GPTGVGK+EL KALA   F  E AM+R+DMSEFMERH+VS+LIG+PPGYVGY EGG+LTEAVRRRPY V+L DE+EKAHPDVF+++L  L+DGRLT+ +GR V+F  T   MTSNVGS V
Sbjct:  357 RYESHHGVRITDSALVAAANLSDRYIADRFLPDKAIDLIDEAASRLAMEKESVPEPIDRLQRRLRQLELVHRQLVDEQEASAVDKRVEVEEEMESAKAELASLKEQWETEKMGLDDVQSVRQEVDQLQHRFAQLDADAKEKQLRGESPEDAYSEMLQVQSRLRELQARIDEAEKHDDSADQTKEEPGDEKRRLLRKEVTEEEIAEVVSTWTGVPVTRMMETERAKLLVMEERLHQRVVGQDEAVTAVSDAVRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMERHSVSRLIGAPPGYVGYEEGGKLTEAVRRRPYAVILLDEMEKAHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNVGSQV 747          
The following BLAST results are available for this feature:
BLAST of DY258885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
CLPB_VIBCH7.367e-8446.74Chaperone protein clpB OS=Vibrio cholerae GN=clpB ... [more]
CLPB_CLOTE7.367e-8447.17Chaperone protein clpB OS=Clostridium tetani GN=cl... [more]
CLPB_BORPE7.367e-8447.07Chaperone protein clpB OS=Bordetella pertussis GN=... [more]
CLPB_BORPA7.367e-8447.07Chaperone protein clpB OS=Bordetella parapertussis... [more]
CLPB_BORBR7.367e-8447.07Chaperone protein clpB OS=Bordetella bronchiseptic... [more]
CLPB_GEOSL9.621e-8446.90Chaperone protein clpB OS=Geobacter sulfurreducens... [more]
CLPB_BRAJA1.257e-8348.67Chaperone protein clpB OS=Bradyrhizobium japonicum... [more]
CLPB2_SYNE71.641e-8342.72Chaperone protein clpB 2 OS=Synechococcus elongatu... [more]
CLPB_VIBPA2.143e-8346.47Chaperone protein clpB OS=Vibrio parahaemolyticus ... [more]
CLPB_RHOBA2.143e-8347.06Chaperone protein clpB OS=Rhodopirellula baltica G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DE10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258885 ID=DY258885; Name=DY258885; organism=Citrus clementina; type=EST; length=1168bp
GCGATATGAAATTCACCACAAGCTTCGTTACACTGATGAAGCACTAGTTT
CTGCTGCTCAGTTGTCATACCAGTACATCAGTGACCGTTTTCTCCCTGAT
AAAGCTATTGATTTGATTGATGAAGCTGGTTCTCGGGTTCGTCTTCGTCA
TGCACAGCTCCCCGAGGAAGCTAGAGAGCTTGAAAAAGAGCTCAGGCAGA
TAACTAAGGAGAAGAATGAGGCTGTTCGTGGCCAAGACTTTGAAAAGGCT
GGAGAGTTACGTGATAGAGAAATGGACCTTAAGGCTCAGATATCTGCTCT
TGTCGATAAAGGCAAAGAGATGAGCAAGGCAGAGACTGAAGCAGGGGATG
TTGGTCCTGTTGTGACTGAAGTGGACATTCAACACATTGTCTCAGCTTGG
ACGGGCATTCCGGTTGAAAAAGTCTCGACTGATGAATCTGATCGCCTCCT
CAAGATGGAAGAGACCCTTCACAAGAGAGTTATTGGTCAGGACGAAGCTG
TCAAAGCTATTAGTCGTGCTATCCGGCGTGCACGTGTTGGACTCAAAAAC
CCCAATCGACCAATTGCTAGTTTCATCTTTTCTGGTCCAACTGGTGTCGG
GAAGTCTGAACTGGCCAAAGCACTGGCTGCCTATTACTTTGGCTCAGAGG
AGGCCATGATCAGGCTTGATATGAGTGAGTTCATGGAAAGACACACTGTT
TCCAAGCTCATTGGTTCACCACCTGGTTATGTTGGTTACACTGAGGGTGG
TCAGCTGACTGAGGCTGTTCGCCGTCGTCCTTATACTGTTGTACTCTTTG
ATGAGATTGAAAAGGCTCATCCTGATGTCTTTCACATGATGCTTTCAAAT
CTCGAGGATGGAAGATTGACAAACCGCAAGGGAAGAATTGTAGACTTTCA
GATTACTCCTTCAAATATGACATCAAATGTTGGAAGCAATGTAAATTGAA
AAAGGGAAGGACCCCCCCTTTGGTTTTGATTTTTGATTTATGAAAGAAGA
AAAAACGCCAATTACAACCAGGAATTAAAAATCCTGGGAAAACTGAAGAA
ATTTGAAACCCAGTACTTTCCAGGGCCGGGAATTTCTTTTAAAAAAAAAT
GGGAAAAAAAAAAATAAATTTTTTTTCCCCCAAAAACCCCTCCCCCCAAG
ACCCCTGGAGAAGGTGTA
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