DY258889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258889 vs. ExPASy Swiss-Prot
Match: COPZ2_MOUSE (Coatomer subunit zeta-2 OS=Mus musculus GN=Copz2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 8.420e-17 Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 2 Query: 77 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKK 391 +IK + +LD++G+R+ KYY + +P+ + FEK VF KT +RTE+EIA L G IVYK D+ +V G ENEL+L +VL FD++ +LR NV+K+ Sbjct: 40 TIKAVFILDNDGRRLLAKYYDDTFPSVKEQMVFEKNVFNKT----SRTESEIAFLGGMTIVYKSSIDIFLYVVGSSSENELMLMSVLACLFDSLSHILRKNVEKR 140
BLAST of DY258889 vs. ExPASy Swiss-Prot
Match: COPZ2_HUMAN (Coatomer subunit zeta-2 OS=Homo sapiens GN=COPZ2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 9.309e-16 Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = 2 Query: 77 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKK 391 +IK + +LD++G+R+ KYY + +P+ + FEK VF KT +RTE+EIA G IVYK DL +V G ENEL+L +VL F+++ +LR NV+K+ Sbjct: 45 TIKAVFILDNDGRRLLAKYYDDTFPSMKEQMVFEKNVFNKT----SRTESEIAFFGGMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKR 145
BLAST of DY258889 vs. ExPASy Swiss-Prot
Match: COPZ_CAEEL (Probable coatomer subunit zeta OS=Caenorhabditis elegans GN=F59E10.3 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.709e-15 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 2 Query: 77 SIKNILLLDSEGKRVAVKYYSND-WPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKK 391 SIK I++LD +G RV KYY + T ++AFEK++F+KT + T A+I +L+G +Y+ DL+F+V G ENEL L L +DAV ++LR NV+KK Sbjct: 13 SIKGIVILDQDGNRVLAKYYDRTTFGTVKEQKAFEKSLFSKTSRN---TSADILLLDGVTCLYRSNVDLYFYVLGSTRENELFLDATLTCLYDAVSVVLRKNVEKK 115
BLAST of DY258889 vs. ExPASy Swiss-Prot
Match: COPZA_DICDI (Probable coatomer subunit zeta-A OS=Dictyostelium discoideum GN=copza PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.065e-11 Identity = 39/107 (36.45%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 77 SIKNILLLDS-EGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAV-GLLLRGNVDKK 391 ++ + +LDS +G+RV KYY+ND+ T ++AFEK VF KT K N EI +L+ ++VYK ++ ++ G +++NE+ L VL F D + L ++KK Sbjct: 7 TVTSFFILDSSKGERVIAKYYNNDFDTLQKQKAFEKKVFDKTSKVN--FGGEITLLDNYLVVYKSFSNIIIYMVGDQNQNEIALLYVLNSFIDTLQNLFENSQINKK 111 The following BLAST results are available for this feature:
BLAST of DY258889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258889 ID=DY258889; Name=DY258889; organism=Citrus clementina; type=EST; length=1243bpback to top |