DY258903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX4_SOLLC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Solanum lycopersicum GN=GPXle-1 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.037e-46 Identity = 82/118 (69.49%), Postives = 98/118 (83.05%), Query Frame = 3 Query: 282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNF 635 +S+YDFTVKD GKDV LS +KGKVL+IVNVAS+CGLT SNY++++ LY+KYK QG EILAFPCNQFGGQEPG+ +I++ CTRFKAE+PIFDKVDVNG N AP+Y LKS G F Sbjct: 9 QSVYDFTVKDAKGKDVDLSIYKGKVLIIVNVASQCGLTNSNYTDMTELYKKYKDQGLEILAFPCNQFGGQEPGNIEDIQQMVCTRFKAEYPIFDKVDVNGDNAAPLYRFLKSSKGGFF 126 HSP 2 Score: 33.113 bits (74), Expect = 3.037e-46 Identity = 16/35 (45.71%), Postives = 19/35 (54.29%), Query Frame = 1 Query: 619 SAGGILGDLVKWNFEKFLSGQKWKSHRRESPPYLP 723 S GG GD +KWNF KFL ++ R SP P Sbjct: 121 SKGGFFGDGIKWNFSKFLIDKEGHVVDRYSPTTSP 155
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX4_GOSHI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.294e-45 Identity = 83/119 (69.75%), Postives = 96/119 (80.67%), Query Frame = 3 Query: 282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPE-IKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNF 635 +S+YDFTVKD G DV LS +KGKVL+IVNVAS+CGLT SNY++L+ +Y+KYK QG EILAFPCNQFGGQEPGS E I+ CTRFKAE+PIFDKVDVNG N AP+Y LKS G F Sbjct: 9 QSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCGLTNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEESIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFF 127 HSP 2 Score: 34.6538 bits (78), Expect = 3.294e-45 Identity = 16/35 (45.71%), Postives = 19/35 (54.29%), Query Frame = 1 Query: 619 SAGGILGDLVKWNFEKFLSGQKWKSHRRESPPYLP 723 S GG GD +KWNF KFL ++ R SP P Sbjct: 122 SKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTP 156
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX4_HELAN (Probable phospholipid hydroperoxide glutathione peroxidase OS=Helianthus annuus GN=GPXHA-2 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.585e-45 Identity = 79/111 (71.17%), Postives = 91/111 (81.98%), Query Frame = 3 Query: 297 FTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWG 629 F+ KD+ G+DV LSK+KGKVLLIVNVAS+CG T SNY EL+ LY+KYK QGFEILAFPCNQFGGQEPGSN EI+ FACTRFKAE+P+F KV+VNG P+Y LKS G Sbjct: 25 FSDKDVKGQDVELSKYKGKVLLIVNVASQCGFTNSNYPELTTLYQKYKDQGFEILAFPCNQFGGQEPGSNEEIQVFACTRFKAEYPVFSKVNVNGKEADPLYKFLKSSKGG 135 HSP 2 Score: 37.7354 bits (86), Expect = 5.585e-45 Identity = 18/36 (50.00%), Postives = 22/36 (61.11%), Query Frame = 1 Query: 619 SAGGILGDLVKWNFEKFLSGQKWKSHRRESPPYLPL 726 S GG LGD +KWNF KFL ++ K R +P PL Sbjct: 132 SKGGFLGDSIKWNFTKFLVDREGKVVDRYAPTTSPL 167
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX4_MESCR (Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.228e-43 Identity = 97/167 (58.08%), Postives = 114/167 (68.26%), Query Frame = 3 Query: 282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNFRRPCQVEL*EVLKW--TK--MEKSSK---RIPPLPPPSKLRRTTRNLGG 761 KS++DF VKD G DV LS +KGKVLLIVNVAS+CGLT SNY EL+ LYE+YK +G EILAFPCNQFG QEPG N +I EFACTRFKAEFPIFDKVDVNG N APVY LKS G F + +KW TK +++ K R P P+ + + + L G Sbjct: 10 KSIHDFIVKDARGNDVDLSIYKGKVLLIVNVASQCGLTNSNYPELTKLYEQYKDKGLEILAFPCNQFGNQEPGDNEQIMEFACTRFKAEFPIFDKVDVNGSNAAPVYKYLKSSKGGLFG--------DGIKWNFTKFLVDRDGKVVDRYAPTTSPASIEKDIKKLIG 168
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.604e-43 Identity = 96/175 (54.86%), Postives = 117/175 (66.86%), Query Frame = 3 Query: 258 AHATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNFRRPCQVEL*EVLKW--TK--MEKSSK---RIPPLPPPSKLRRTTRNLGG 761 A ++A KS+++F V+D G DV LS +KGKVLLIVNVAS+CGLT SNY+E++ LYEKY+ G EILAFPCNQFG QEPGSN E+ EFACTRFKAE+PIFDKVDVNG N AP+Y LKS G F + LKW TK ++K R P P + + + L G Sbjct: 2 ASDSSAQPKSVHEFVVRDARGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTEMTELYEKYRELGLEILAFPCNQFGNQEPGSNEEVLEFACTRFKAEYPIFDKVDVNGSNAAPIYKFLKSSKGGLFG--------DGLKWNFTKFLVDKDGNVVDRYAPTTSPKSIEKDVKKLLG 168
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX5_ARATH (Probable glutathione peroxidase 5 OS=Arabidopsis thaliana GN=GPX5 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 7.714e-43 Identity = 76/119 (63.87%), Postives = 96/119 (80.67%), Query Frame = 3 Query: 264 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSK 620 +++ +EKS++ FTVKD GK+V LS ++GKVLL+VNVAS+CG T SNY++L+ LY KYK QGF +LAFPCNQF QEPG++ E +FACTRFKAE+P+F KV VNG N APVY LKSK Sbjct: 6 SSSVSEKSIHQFTVKDSSGKEVDLSVYQGKVLLVVNVASKCGFTESNYTQLTELYRKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQKVRVNGQNAAPVYKFLKSK 124 HSP 2 Score: 26.9498 bits (58), Expect = 7.714e-43 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 1 Query: 634 LGDLVKWNFEKFLSGQ 681 LG +KWNF KFL G+ Sbjct: 129 LGSRIKWNFTKFLVGK 144 HSP 3 Score: 24.6386 bits (52), Expect = 7.714e-43 Identity = 11/26 (42.31%), Postives = 16/26 (61.54%), Query Frame = 2 Query: 674 VDKNGKVIEENPPPTSPFQIEKDNQK 751 V K+G+VI+ SP I+KD +K Sbjct: 142 VGKDGQVIDRYGTTVSPLSIQKDIEK 167
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX4_ARATH (Probable glutathione peroxidase 4 OS=Arabidopsis thaliana GN=GPX4 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.647e-39 Identity = 72/118 (61.02%), Postives = 92/118 (77.97%), Query Frame = 3 Query: 264 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKS 617 + + E+S++ FTVKD GKD+ +S ++GKVLLIVNVAS+CG T +NY++L+ LY KYK Q FEILAFPCNQF QEPG++ E EFAC RFKAE+P+F KV VNG N AP+Y LK+ Sbjct: 4 SASVPERSVHQFTVKDSSGKDLNMSIYQGKVLLIVNVASKCGFTETNYTQLTELYRKYKDQDFEILAFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQKVRVNGQNAAPIYKFLKA 121 HSP 2 Score: 26.9498 bits (58), Expect = 2.647e-39 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 1 Query: 634 LGDLVKWNFEKFLSGQ 681 LG +KWNF KFL G+ Sbjct: 127 LGSRIKWNFTKFLVGK 142 HSP 3 Score: 22.7126 bits (47), Expect = 2.647e-39 Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 2 Query: 674 VDKNGKVIEENPPPTSPFQIEKDNQK 751 V K+G VI+ +P IEKD +K Sbjct: 140 VGKDGLVIDRYGTMVTPLSIEKDIKK 165
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX8_ARATH (Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.973e-39 Identity = 78/158 (49.37%), Postives = 109/158 (68.99%), Query Frame = 3 Query: 282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNFRRPCQVEL*EVLKWTKMEKSSKRIPPLPPPSKLRRTTRNL 755 +S+Y+ +++D G ++ LS++K KVLLIVNVAS+CG+T SNY+EL+ LY +YK +G EILAFPCNQFG +EPG+N +I +F CTRFK+EFPIF+K++VNG N +P+Y LK WG F Q + L K ++ +R P P L +NL Sbjct: 7 ESVYELSIEDAKGNNLALSQYKDKVLLIVNVASKCGMTNSNYTELNELYNRYKDKGLEILAFPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNKIEVNGENASPLYKFLKKGKWGIFGDDIQWNFAKFLV-DKNGQAVQRYYPTTSPLTLEHDIKNL 163
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX2_CAEEL (Probable glutathione peroxidase R05H10.5 OS=Caenorhabditis elegans GN=R05H10.5 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.607e-34 Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 3 Query: 285 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWG 629 S++ TVK+ G+D PLS ++GKVL+IVNVAS+CGLT SNY++ L + YK G E+LAFPCNQFGGQEP +I F +FK E +F K+DVNG NTAP+Y LK + G Sbjct: 3 SVHGITVKNAQGEDTPLSNYQGKVLIIVNVASQCGLTNSNYNQFKELLDVYKKDGLEVLAFPCNQFGGQEPSCEIDIAAFVADKFKFEPTLFQKIDVNGDNTAPLYKFLKQEKGG 117 HSP 2 Score: 33.4982 bits (75), Expect = 1.607e-34 Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 1 Query: 625 GGILGDLVKWNFEKFLSGQKWKSHRRESPPYLP 723 GG L D +KWNF KFL G+ +R SP P Sbjct: 116 GGFLVDAIKWNFTKFLVGRDGHVIKRFSPTTEP 148
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX1_CAEEL (Probable glutathione peroxidase F26E4.12 OS=Caenorhabditis elegans GN=F26E4.12 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.469e-30 Identity = 70/167 (41.92%), Postives = 97/167 (58.08%), Query Frame = 3 Query: 285 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNFRRPCQVEL*EVLKWT-------KMEKSSKRIPPLPPPSKLRRTTRNLGGE 764 S+YDF VK+ +G DV LS +KGKVL+IVNVAS+CGLT NY++L L + YK G E+LAFPCNQF GQEP +I+ F +FK E +F K+DVNG +P++ LK++ G + + +KW + K KR P P + + + GE Sbjct: 3 SVYDFNVKNANGDDVSLSDYKGKVLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVLAFPCNQFAGQEPSCEIDIQAFVADKFKFEPTLFQKIDVNGDKQSPLFKFLKNEKGG--------FMFDAIKWNFTKFLVGRDGKIIKRFGPTTDPKDMEKDIKEALGE 161 The following BLAST results are available for this feature:
BLAST of DY258903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258903 ID=DY258903; Name=DY258903; organism=Citrus clementina; type=EST; length=947bpback to top |