DY258903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: BTUE_ECOLI (Vitamin B12 transport periplasmic protein btuE OS=Escherichia coli (strain K12) GN=btuE PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.702e-26 Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 279 EKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLL 611 + S+ VKDIDG+ L KF G VLLIVNVAS+CGLTP Y +L ++ + + +GF +L FPCNQF QEPGS+ EIK + T + FP+F K++VNG P+Y L Sbjct: 2 QDSILTTVVKDIDGEVTTLEKFAGNVLLIVNVASKCGLTPQ-YEQLENIQKAWVDRGFMVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGEGRHPLYQKL 111 HSP 2 Score: 30.0314 bits (66), Expect = 1.702e-26 Identity = 14/28 (50.00%), Postives = 17/28 (60.71%), Query Frame = 1 Query: 640 DLVKWNFEKFLSGQKWKSHRRESPPYLP 723 D + WNFEKFL G+ K +R SP P Sbjct: 141 DDILWNFEKFLVGRDGKVIQRFSPDMTP 168
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: BSAA_BACSU (Glutathione peroxidase homolog bsaA OS=Bacillus subtilis GN=bsaA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.712e-26 Identity = 57/115 (49.57%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 285 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWG 629 S+Y V+ I GKD+ L F GKVL+IVN AS+CG T S +L LY+ Y+ +G EIL FPCNQF QEPG +I+EF T + FP+F KVDVNG N P++ L G Sbjct: 2 SIYHMKVRTITGKDMTLQPFAGKVLMIVNTASKCGFT-SQLKQLQELYDTYQQEGLEILGFPCNQFMNQEPGEEADIQEFCETNYGVTFPMFSKVDVNGKNAHPLFVYLTEHAKG 115 HSP 2 Score: 25.7942 bits (55), Expect = 1.712e-26 Identity = 9/23 (39.13%), Postives = 16/23 (69.57%), Query Frame = 2 Query: 674 VDKNGKVIEENPPPTSPFQIEKD 742 VD+NG+++ P T+P ++E D Sbjct: 131 VDRNGEIVGRYSPNTNPKELEDD 153
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPO_LACLM (Glutathione peroxidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpo PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.781e-26 Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 285 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWG 629 + YDF+ ++G+ V +S +KGKV+++VN AS+CG TP + L LYE YK QG EIL FPCNQF Q+ G N EI EF + F +F K+ VNG P+Y LK + G Sbjct: 2 NFYDFSAVKMNGETVSMSDYKGKVVIVVNTASKCGFTPQ-FEGLEKLYETYKDQGLEILGFPCNQFANQDAGENTEINEFCQLNYGVTFTMFQKIKVNGKEAHPLYQFLKKEAKG 115 HSP 2 Score: 26.5646 bits (57), Expect = 3.781e-26 Identity = 10/26 (38.46%), Postives = 19/26 (73.08%), Query Frame = 2 Query: 674 VDKNGKVIEENPPPTSPFQIEKDNQK 751 +D++G+VIE P T P ++E++ +K Sbjct: 130 IDRDGQVIERFAPKTEPEEMEEEIKK 155
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX4_HYLLA (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Hylobates lar GN=GPX4 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.822e-25 Identity = 51/110 (46.36%), Postives = 73/110 (66.36%), Query Frame = 3 Query: 285 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLK 614 S+++F+ K +DG V L K++G V ++ NVAS+ G T NY++L L+ +Y G LAFPCNQFG QEPGSN EIKEFA + +F +F K+ VNG + P++ +K Sbjct: 40 SMHEFSAKVLDGHTVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRFLAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMK 148 HSP 2 Score: 33.113 bits (74), Expect = 1.822e-25 Identity = 16/37 (43.24%), Postives = 20/37 (54.05%), Query Frame = 1 Query: 616 PSAGGILGDLVKWNFEKFLSGQKWKSHRRESPPYLPL 726 P GILG+ +KWNF KFL + +R P PL Sbjct: 151 PKGKGILGNAIKWNFTKFLFDKNGCVVKRYGPMEEPL 187
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: BSAA_BACHD (Glutathione peroxidase homolog bsaA OS=Bacillus halodurans GN=bsaA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.388e-25 Identity = 69/158 (43.67%), Postives = 93/158 (58.86%), Query Frame = 3 Query: 285 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNFRRPCQVEL*EVLKW--TK--MEKSS---KRIPPLPPPSKLR 737 S+++F+ + I+G++ LS +K +VLLIVN AS+CGLTP Y EL LYE YK QGF +L FP NQF QEPG + EI F + FPIF+KV VNG P++ L S+ G F E +KW TK +++S KR P P K++ Sbjct: 2 SIHEFSARLINGEEKALSDYKDQVLLIVNTASKCGLTPQ-YEELQILYETYKDQGFTVLGFPSNQFMNQEPGDHNEIAAFCERNYGVSFPIFEKVKVNGKEAHPLFQYLTSQQGGLFT--------EKIKWNFTKFLIDRSGNVVKRYAPSTSPIKIK 150
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: BSAA_STAES (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=bsaA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.731e-25 Identity = 64/165 (38.79%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNFRRPCQVEL*EVLKWT-------KMEKSSKRIPPLPPPSKLRRTTRNL 755 +S+YDF V+ +G+ L ++KG V+LIVN AS CG TP + L LY++YK Q F IL FPCNQFGGQEPGS E + + FPI +KVDV G N P++H L + G E +KW + KR P P +++ L Sbjct: 2 ESIYDFVVQKNNGESYKLEQYKGDVMLIVNTASECGFTPQ-FEGLQKLYDEYKDQRFIILGFPCNQFGGQEPGSGEEAAQNCKINYGVTFPIHEKVDVKGDNQHPLFHFLTNAAKGMIN--------EKIKWNFTKFLIDREGNVIKRFSPQKKPEQIKTEIEKL 157
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: GPX1_CHLRE (Glutathione peroxidase 1, mitochondrial OS=Chlamydomonas reinhardtii GN=GPX PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 8.275e-24 Identity = 59/122 (48.36%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 255 GAHATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTR--FKAEFPIFDKVDVNGPNTAPVYHLLK 614 G+ T++T + + + DID K+V +V+L+VNVAS+ GLT +NY E + L KY I+AFPCNQFGGQEPG+N EIK FA R A + DKVDVNG N +PVY+ LK Sbjct: 33 GSKPTSSTS-NFHQLSALDIDKKNVDFKSLNNRVVLVVNVASKUGLTAANYKEFATLLGKYPATDLTIVAFPCNQFGGQEPGTNAEIKAFASARGFSGAGALLMDKVDVNGANASPVYNFLK 153
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: BSAA_STAAW (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MW2) GN=bsaA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.411e-23 Identity = 64/165 (38.79%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNFRRPCQVEL*EVLKWT-------KMEKSSKRIPPLPPPSKLRRTTRNL 755 +++YDF V+ G L +KG V+LIVN AS CG T S + L LYEKYK QGF IL FPCNQFGGQEPGS E + + FP+ K+DV G + P++ L + G F E +KW + KR P P ++ R L Sbjct: 2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFN--------EKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKL 157
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: BSAA_STAAS (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MSSA476) GN=bsaA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.411e-23 Identity = 64/165 (38.79%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNFRRPCQVEL*EVLKWT-------KMEKSSKRIPPLPPPSKLRRTTRNL 755 +++YDF V+ G L +KG V+LIVN AS CG T S + L LYEKYK QGF IL FPCNQFGGQEPGS E + + FP+ K+DV G + P++ L + G F E +KW + KR P P ++ R L Sbjct: 2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFN--------EKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKL 157
BLAST of DY258903 vs. ExPASy Swiss-Prot
Match: BSAA_STAAR (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MRSA252) GN=bsaA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.411e-23 Identity = 64/165 (38.79%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 282 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYHLLKSKCWGNFRRPCQVEL*EVLKWT-------KMEKSSKRIPPLPPPSKLRRTTRNL 755 +++YDF V+ G L +KG V+LIVN AS CG T S + L LYEKYK QGF IL FPCNQFGGQEPGS E + + FP+ K+DV G + P++ L + G F E +KW + KR P P ++ R L Sbjct: 2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFN--------EKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKL 157 The following BLAST results are available for this feature:
BLAST of DY258903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258903 ID=DY258903; Name=DY258903; organism=Citrus clementina; type=EST; length=947bpback to top |