DY259707

Overview
NameDY259707
Unique NameDY259707
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA14_ORYSJ (Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica GN=IAA14 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.709e-33
Identity = 74/160 (46.25%), Postives = 96/160 (60.00%), Query Frame = 1
Query:  160 EPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGS----------GCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEA 609
            E  ++PA+K QVVGWPP+ S+R++T  S+      AA+GK G           G LYVKVSMDGAPYLRKVDL++Y  Y EL  AL+ +F CF+     S                    + + + YED+DGD ML GDVPWDMF  +C++LRIM+GSEA
Sbjct:   54 EDGASPASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASAS-------------------AAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEA 194          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.995e-32
Identity = 88/217 (40.55%), Postives = 116/217 (53.46%), Query Frame = 1
Query:   91 DVLPLSPK------PVQEKKNQVPALNENE----PTSAPAAKAQVVGWPPIRSFRKNTM------------ASNLVKNND------------AAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL-APRAME 636
            D LP +P+        ++      A +++E      + P AKAQVVGWPP+RS+RK+              A +   N D            A+   + +G   VKVSMDGAPYLRK+DL++Y  Y EL  ALE MF CF                  S   D  + SE+ +TY+D+DGD MLVGDVP+DMFT TC++LRIMK SEA GL +PR M+
Sbjct:   27 DDLPSTPRGKKRAAAAEDNNANAAAADDDEHDAVEAAPPVAKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF------------------SGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.486e-31
Identity = 74/161 (45.96%), Postives = 101/161 (62.73%), Query Frame = 1
Query:  151 NENEPTSAPAAKAQVVGWPPIRSFRKNTM-------ASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFS-CFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEA 609
            +E++  +A  AKAQVVGWPP+R++R+NT        A+     ++  + +   G LYVKVSMDGAPYLRKVDLK+   Y EL  AL+ +F+ CF+            DG S+          ++ + YED+DGD MLVGDVPW+MF  +C++LRIMKGSEA
Sbjct:   75 DEHDDDTAAPAKAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFSA--------TASDGCSDG---------QFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.065e-29
Identity = 75/158 (47.47%), Postives = 93/158 (58.86%), Query Frame = 1
Query:  172 APAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEA--IGLAPRAMEK 639
            +PAAK+QVVGWPP+ S+RK           +A+  K G G  YVKVSMDG PYLRK+DL     Y +L+ AL+K+F    IG     G                   EYV  YED+DGDWML GDVPW MF E+C+RLRIMK S+A   GL PR +++
Sbjct:   64 SPAAKSQVVGWPPVCSYRKKNSCK------EASTTKVGLG--YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDG----------------DNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQPRGVDE 197          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.065e-29
Identity = 73/154 (47.40%), Postives = 96/154 (62.34%), Query Frame = 1
Query:  184 KAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEA--IGLAPRAMEK 639
            K+QVVGWPP+ S+RK          N   EG S    +YVKVSMDGAP+LRK+DL ++  Y +L+ AL+K+F C+              G+ E+  +     SE+V  YED+DGDWMLVGDVPW+MF E+C+RLRIMK S+A   GL P+   K
Sbjct:   62 KSQVVGWPPVCSYRKK---------NSMNEGASK---MYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGCY--------------GMVEA--LKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKGFGLQPKGSLK 187          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.373e-29
Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 1
Query:  184 KAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIG 615
            K QVVGWPP+ S+RK  M       N+ ++       +Y+KVSMDGAPYLRK+DL ++  Y+EL+ ALEK+F C  I               E  L D     E+V  YED+DGDWMLVGDVPW+MF E+C+RLRIMK S+A G
Sbjct:   53 KNQVVGWPPVCSYRKKNM-------NEGSK-------MYMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFDCCGI---------------EEALKDA-ENCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKG 166          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 5.287e-29
Identity = 72/164 (43.90%), Postives = 96/164 (58.54%), Query Frame = 1
Query:  124 EKKNQVPALNENEPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIG 615
            E +N V +  E+E  S P  K+Q VGWPP+ S+R+        KNN+ A    G    YVKVSMDG PY+RK+DL   ++Y+ L + LE +F C  IG         ++G             EY++ YED+D DWMLVGDVPW MF E+C+RLRI+K S+A G
Sbjct:   50 ENENSVVSSVEDE--SLPVVKSQAVGWPPVCSYRRK-------KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIGVA-------KEGKK----------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.178e-28
Identity = 72/155 (46.45%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  151 NENEPTSAPAAKAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIG 615
            + +E       K QVVGWPP+ S+RK          N   E K     LYVKVSMDGAP+LRK+DL ++  Y +L+ AL+K F C+  G C++             L D    +E+V  YED+DGDWMLVGDVPW+MF E+C+RLRIMK S+A G
Sbjct:   46 SSSEEDGKKETKNQVVGWPPVCSYRKK---------NTVNEPK-----LYVKVSMDGAPFLRKIDLAMHKGYSDLAFALDKFFGCY--GICEA-------------LKDA-ENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKG 170          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.538e-28
Identity = 69/154 (44.81%), Postives = 93/154 (60.39%), Query Frame = 1
Query:  184 KAQVVGWPPIRSFRKNTMASNLVKNNDAAEGKSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEA--IGLAPRAMEK 639
            K QVVGWPP+ S+RK    +   K             +YVKVSMDGAP+LRK+DL ++  Y +L+ ALEK+F C+              G+ E+  +  +   E+V  YED+DGDWMLVGDVPW+MF E+C+RLRIMK ++A   GL P+   K
Sbjct:   62 KNQVVGWPPVCSYRKKNSVNEASK-------------MYVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLFGCY--------------GMVEA--LKNVENGEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRADAKGFGLQPKGSLK 186          
BLAST of DY259707 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.845e-28
Identity = 75/169 (44.38%), Postives = 97/169 (57.40%), Query Frame = 1
Query:  175 PAAKAQVVGWPPIRSFRKNTMASNLVKNN-----------------DAAEG-KSGSGCLYVKVSMDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPR 627
            P +   VVGWPPIR FR N++ +   +N                  D  EG K G    +VKV+MDG    RKVDL  + +Y  L+ ALE MF+  +IG C SH        +  +L+D  + +EY LTYEDRDGDWMLVGDVPW+MF  + +RLRIM+ S+A GL  R
Sbjct:  106 PHSSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNT------NSLKLLD--NSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
The following BLAST results are available for this feature:
BLAST of DY259707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA14_ORYSJ2.709e-3346.25Auxin-responsive protein IAA14 OS=Oryza sativa sub... [more]
IAA12_ORYSJ2.995e-3240.55Auxin-responsive protein IAA12 OS=Oryza sativa sub... [more]
IAA24_ORYSJ1.486e-3145.96Auxin-responsive protein IAA24 OS=Oryza sativa sub... [more]
IAA19_ARATH1.065e-2947.47Auxin-responsive protein IAA19 OS=Arabidopsis thal... [more]
AUX22_SOYBN1.065e-2947.40Auxin-induced protein AUX22 OS=Glycine max GN=AUX2... [more]
IAA6_PEA2.373e-2949.31Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA... [more]
IAA6_ARATH5.287e-2943.90Auxin-responsive protein IAA6 OS=Arabidopsis thali... [more]
AX22C_PHAAU1.178e-2846.45Auxin-induced protein 22C OS=Phaseolus aureus GN=A... [more]
AX22A_PHAAU1.538e-2844.81Auxin-induced protein 22A OS=Phaseolus aureus GN=A... [more]
IAA10_ORYSJ5.845e-2844.38Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DB11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259707 ID=DY259707; Name=DY259707; organism=Citrus clementina; type=EST; length=979bp
GGTAAACCTGATGCCGAGTTGGGTAAAGGTGCTGTCTTGTATTCTCCTAG
AGGTGGGTTAGATGATAAGTGCAAGATCGTGAAGGAAGTTGATGTCTTGC
CTCTGTCTCCTAAGCCAGTTCAAGAGAAGAAGAATCAAGTCCCTGCTTTA
AATGAAAATGAACCAACTAGTGCCCCTGCTGCAAAGGCACAGGTGGTGGG
ATGGCCACCAATTCGATCTTTCCGGAAGAACACCATGGCCTCTAATTTGG
TAAAGAACAATGATGCCGCTGAAGGCAAGTCGGGATCTGGATGTCTCTAT
GTAAAGGTTAGCATGGATGGTGCTCCATATCTAAGGAAGGTTGATCTCAA
AATCTACAGCAATTACATGGAACTCTCTTCAGCTCTTGAGAAGATGTTCA
GCTGCTTTACCATTGGGCAATGTGATTCTCATGGTCTTCCGGGGCAAGAC
GGCCTAAGTGAGAGTCGTCTGATGGATCTTCTCCATGGTTCTGAATATGT
GCTTACATATGAAGACAGGGATGGTGACTGGATGCTTGTTGGTGATGTCC
CTTGGGATATGTTCACTGAGACGTGTAGAAGACTTCGCATCATGAAAGGT
TCAGAGGCTATTGGACTGGCTCCAAGGGCCATGGAGAAGTGCAAGAACCG
AACTTAGTGTCGCAAATATCTTGAAAGACTTAAAAAGGGAGAAAATTTGT
TTTTTTCAGAATCCAAACACGTGAAAAGATGTTAGGCATTTTTGTCAAGG
ACCCTATTATTATATAAATGTTATCAAATATCATAAGTTTGCTGTATTTA
ATTAGTTAATATGGGGAAAACATCCCTCTAAACAAGATAGCACTGCAAAC
ATATCCGTTTCACGTTTGTTTTAGTATTATATTTTGTCCTCCTTTACTTT
TCCGGGAAATTTTTTTATTTGGGAACAAAATATAAATGATTTGCTTGTTG
GTTTCCAGTTTGCCACTCTTCCCTGTTTA
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