DY259738

Overview
NameDY259738
Unique NameDY259738
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_EUBE2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=pckA PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 4.806e-68
Identity = 133/232 (57.33%), Postives = 164/232 (70.69%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVG-PHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            DNGV N EGGCYAK I+L ++ EPDI+NAIK   +LEN+  DE+ + +D+ DKSVTENTR +YPI +I N   P    P  KN+I L+ DAFGVLPPVS L+ EQT Y+F+SG+TA +AGTE G+ EP  TFSACFG AF+ LHPTKYAA L +KM+K GA  +LVNTGW+    G+G RI +  TR IIDAI SG +  A   K P+F  E PTE+ GV   ILDP  T+A
Sbjct:  269 DNGVFNFEGGCYAKVINLDKDSEPDIYNAIKRNALLENVTLDENGK-IDFADKSVTENTRVSYPINHIENIVRPISSAPAAKNVIFLSADAFGVLPPVSILTPEQTQYYFLSGFTAKLAGTERGITEPTPTFSACFGQAFLELHPTKYAAELVKKMEKSGAKAYLVNTGWN----GTGKRISIKDTRGIIDAILSGAINTAPTKKIPMFNFEVPTELPGVDPAILDPRDTYA 495
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=pckA PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 4.806e-68
Identity = 128/230 (55.65%), Postives = 159/230 (69.13%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G+ EP+ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +  TR  I+AI  G++ +  +    VF L  P  ++GV S +L+P  TW
Sbjct:  256 DEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSIAKCEFENFEVFNLAIPKALEGVESTLLNPINTW 484
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJ8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=pckA PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 4.806e-68
Identity = 128/230 (55.65%), Postives = 159/230 (69.13%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G+ EP+ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +  TR  I+AI  G++ +  +    VF L  P  ++GV S +L+P  TW
Sbjct:  256 DEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSIAKCEFENFEVFNLAIPKALEGVESTLLNPINTW 484
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_STAES (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pckA PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 6.276e-68
Identity = 124/229 (54.15%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   75 NGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            NGV NIEGGCYAK I LS++KEP I+NAIK+GT+LEN V ++    +D+ D + TENTRAAYPI+YI N   P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE GV EP+ +FS CFGA F+ L PTKYA +L   +  H    +LVNTGW+GG YG G RI L +TR ++D   SG L    Y K   FGL  P +I  VP+ IL+P   W
Sbjct:  264 NGVFNIEGGCYAKAIHLSKQKEPQIYNAIKYGTILENTVTNDDGT-IDFDDNTYTENTRAAYPIDYIENIVTPSKAAHPNTIIFLTADAFGVIPPISKLTKDQAMYHFLSGFTSKLAGTERGVTEPQPSFSTCFGAPFLPLSPTKYADLLGNLIDIHDVDVYLVNTGWTGGKYGIGRRISLHYTREMVDQAISGKLKNTKYIKDDTFGLNIPVQIDSVPTTILNPINAW 491
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SINMW (Phosphoenolpyruvate carboxykinase [ATP] OS=Sinorhizobium medicae (strain WSM419) GN=pckA PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 6.276e-68
Identity = 125/232 (53.88%), Postives = 160/232 (68.97%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            + GV N EGGCYAK I LS   EP+I+    +FGTV+EN+V DE  R  D+ D S+TENTR AYP+ +IPNA      P P+ II+L  DAFGVLPP++KL+ EQ MYHF+SGYTA VAGTE+GV EP ATFS CFGA F+  HP++Y  +L E + ++G T WLVNTGW+GG+YG+G+R+ +  TR ++ A   G+L  AS+     FG   P  + GV S ILDP  TWA
Sbjct:  263 EKGVFNFEGGCYAKAIRLSEAAEPEIFATTQRFGTVMENVVLDER-RMPDFEDGSLTENTRCAYPLHFIPNASKTGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKELIARNGVTCWLVNTGWTGGAYGTGSRMPIKVTRALLSAALDGSLNSASFRSDANFGFAVPVSVPGVESRILDPRSTWA 493
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_PARDP (Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoccus denitrificans (strain Pd 1222) GN=pckA PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 6.276e-68
Identity = 119/232 (51.29%), Postives = 161/232 (69.40%), Query Frame = 3 
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            SDNG+ N EGGCYAK I+LS E EP+I+    KFGTV+EN+V+D  T E+D+ D S+T+N R AYP+E I NA    +G  P+N+I+L CDA+GVLPP+++L+  Q MYHF+SG+T+   GTE GV EP  TFS CFGA F+   P  Y  +L EK+ K GA  WLVNTGW+GG++G+G R+ +  TR ++ A   G+L +A + K P FG E P  + GV  ++LDP +TW
Sbjct:  263 SDNGIFNFEGGCYAKTINLSAEAEPEIYATCFKFGTVIENMVYDPDTLELDFEDNSLTDNMRCAYPLEQISNASETSLGGQPRNVIMLTCDAYGVLPPIARLTPAQAMYHFLSGFTSKTPGTEVGVTEPTPTFSTCFGAPFMPRRPEVYGKLLQEKIAKTGAACWLVNTGWTGGAFGTGKRMPIKATRALLTAALDGSLNDAQFRKDPNFGFEVPVSVPGVEDKLLDPRQTW 494
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SILST (Phosphoenolpyruvate carboxykinase [ATP] OS=Silicibacter sp. (strain TM1040) GN=pckA PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 8.197e-68
Identity = 121/232 (52.16%), Postives = 158/232 (68.10%), Query Frame = 3 
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            + NG  N EGGCYAK I+L+ E EP+I+    KFGTV+EN+ FD  T ++++ D S+T N R AYP+ YI NA     G HPKNII+L CDAFGVLPP+++L+  Q MYHF+SG+T+ VAGTE GV EP  TFS CFGA F+   P  Y  +L EK+  HGAT WLVNTGW+GG+YG+G+R+ +  TR ++ A   G+L  A + K P FG + P    GV   +LDP +TW
Sbjct:  263 ASNGTFNFEGGCYAKTINLNPEAEPEIYATTEKFGTVIENMTFDPETFDLNFDDDSLTANMRCAYPLHYISNASASARGGHPKNIIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGNLLREKIAAHGATCWLVNTGWTGGAYGTGSRMPIKATRALLTAALDGSLANAEFRKDPNFGFDVPVAAPGVAEVLLDPRRTW 494
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_METEP (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium extorquens (strain PA1) GN=pckA PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 8.197e-68
Identity = 119/232 (51.29%), Postives = 159/232 (68.53%), Query Frame = 3 
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            S +G+ N EGGCYAK I LSR  EP+I+    +FGTV+EN+V D  TR  D+ D S+TENTR AYP+++I NA       HPKNI++L CDAFGV+PP++KL+  + MYHF+SGYTA VAGTE G+  P ATFS CFGA F+  HP+ Y  +L E M +HG   WLVNTGW+GG  G+G R+ +  TRR++ A   G+L +  + + P FG   P E+ GV +++L P +TW
Sbjct:  264 SRDGIFNFEGGCYAKTIRLSRNAEPEIYATTERFGTVMENVVIDPLTRVPDFDDASLTENTRCAYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIAKLTGAEAMYHFLSGYTAKVAGTERGLTAPEATFSTCFGAPFMPRHPSVYGNLLRELMAEHGVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQVEFRRDPYFGFSVPVEVPGVETQVLSPVETW 495
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_METC4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=pckA PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 8.197e-68
Identity = 119/232 (51.29%), Postives = 159/232 (68.53%), Query Frame = 3 
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            S +G+ N EGGCYAK I LSR  EP+I+    +FGTV+EN+V D  TR  D+ D S+TENTR AYP+++I NA       HPKNI++L CDAFGV+PP++KL+  + MYHF+SGYTA VAGTE G+  P ATFS CFGA F+  HP+ Y  +L E M +HG   WLVNTGW+GG  G+G R+ +  TRR++ A   G+L +  + + P FG   P E+ GV +++L P +TW
Sbjct:  264 SRDGIFNFEGGCYAKTIRLSRNAEPEIYATTERFGTVMENVVIDPLTRVPDFDDASLTENTRCAYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIAKLTGAEAMYHFLSGYTAKVAGTERGLTAPEATFSTCFGAPFMPRHPSVYGNLLRELMAEHGVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQVEFRRDPYFGFSVPVEVPGVETQVLSPVETW 495
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJE (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni GN=pckA PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 8.197e-68
Identity = 128/230 (55.65%), Postives = 159/230 (69.13%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G+ EP+ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +  TR  I+AI  G++ +  +    VF L  P  ++GV S +L+P  TW
Sbjct:  256 DEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNPINTW 484
The following BLAST results are available for this feature:
BLAST of DY259738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_EUBE24.806e-6857.33Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacte... [more]
PCKA_CAMJJ4.806e-6855.65Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJ84.806e-6855.65Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_STAES6.276e-6854.15Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_SINMW6.276e-6853.88Phosphoenolpyruvate carboxykinase [ATP] OS=Sinorhi... [more]
PCKA_PARDP6.276e-6851.29Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoc... [more]
PCKA_SILST8.197e-6852.16Phosphoenolpyruvate carboxykinase [ATP] OS=Silicib... [more]
PCKA_METEP8.197e-6851.29Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_METC48.197e-6851.29Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_CAMJE8.197e-6855.65Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259738 ID=DY259738; Name=DY259738; organism=Citrus clementina; type=EST; length=1040bp
GATAATGGAGTATCTTTCCAGCAGTGCTCATCATCTCCAATTAAGTACCG
GTTATGATCAGTAGACAGAGTGATAATGGAGTATCAAACATTGAAGGCGG
GTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATATCT
GGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATGAG
CATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACTCG
TGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGATACCTTGTGTTG
GCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATGCATTTGGTGTA
CTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATGTACCACTTCAT
CAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGGTGTGAAGGAGC
CACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTATAATGCTACAC
CCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAGAAGCATGGGGC
TACTGGATGGTTGGTTAACACTGGCTGGTCAGGTGGAAGCTATGGGTCAG
GAAATCGTATTAAATTAGCTTTTACGAGAAGAATCATTGATGCAATACAT
TCTGGGACTCTTTTGGAGGCAAGCTACACAAAGACTCCAGTTTTTGGGCT
TGAGACCCCAACTGAGATAAAGGGAGTGCCCTCAGAAATCCTGGATCCAG
AAAAAACATGGGCCGGAAATGAAGGGCTACAGGGATACACTCCTTGAAGC
CTAGGAAACCCTTTTCAAAAAAAATTTTGAGGGGCTTTGGGAATCCACAG
AATTGGAAAGGAACACCAAGCCTTACCGGAGAGATTCCTGGCATCCGGCC
CCCTTTTCCTAATCAAAAGTCTTCAAAAACGAACCGGGGCGCCCAGGGGA
CACCAAAAAAATAAAAAAAAACCTTATTTCGCCAAGGCGAGCCATACGTG
TGGGTAAAACTAAAAAAAGCCCCCCTACCCCCTCCCGGGA
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