DY259738

Overview
NameDY259738
Unique NameDY259738
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_BRUSU (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella suis GN=pckA PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.398e-67
Identity = 126/232 (54.31%), Postives = 162/232 (69.83%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            ++GV N EGGCYAK I LS E EP+I+    +FGTVLEN+V DE+ R+ D+ D S+TENTR AYP+++IPNA     G  PKNII+L  DAFGV+PP++KL+  Q MYHF+SGYTA VAGTE+GV EP ATFS CFGA F+  HP++Y  +L + + +H    WLVNTGW+GG+YG G R+ +  TR ++ A   G+L  A +   P FG   P E+ GV S ILDP  TWA
Sbjct:  263 EHGVFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLDEN-RQPDFDDGSLTENTRCAYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLVNTGWTGGAYGVGKRMPIKATRALLAAALDGSLNNAEFRIDPNFGFAVPVEVPGVESSILDPRSTWA 493          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_RHIL3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=pckA PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.385e-67
Identity = 124/233 (53.22%), Postives = 161/233 (69.10%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            S+NG+ N EGGCYAK I LS E EP+I+    +FGTVLEN+V +E +RE D+ D S+TENTR AYP+++IPNA       HPK II+L  DAFGV+PP+++L+ +Q MYHF+SGYTA VAGTE+GV EP ATFS CFGA F+  HP +Y  +L E + +HG   WLVNTGW+GG+YG+G R+ +  TR ++ A  SG L +  +     FG   P  + GV   ILDP  TWA
Sbjct:  262 SENGIFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLNE-SREPDFNDGSLTENTRCAYPMDFIPNASKTGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELIGRHGVQCWLVNTGWTGGAYGTGKRMPIKATRALLAAALSGELGQVEFRADTNFGFAVPVSVHGVDGSILDPRSTWA 493          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_METRJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=pckA PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.385e-67
Identity = 121/237 (51.05%), Postives = 161/237 (67.93%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEG 776
            S++G+ N EGGCYAK I LSR  EP+I+    +FGTV+EN++ D  TR  D+ D S+TENTR AYP+++I NA       HPKNI++L CDAFGV+PP++KL+  + MYHF+SGYTA VAGTE G+  P ATFS CFGA F+  HP+ Y  +L + + KH    WLVNTGW+GG  G+G R+ +  TRR++ A   G+L +A + + P FG   P  + GV   IL P KTWA N+G
Sbjct:  264 SNSGIFNFEGGCYAKTIRLSRNAEPEIYATTERFGTVMENVIIDPVTRVPDFDDASLTENTRCAYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIAKLTGAEAMYHFLSGYTAKVAGTERGLTGPEATFSTCFGAPFMPRHPSTYGNLLRDLIAKHSVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQAEFRRDPYFGFAVPVSVPGVEPHILTPVKTWA-NKG 499          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_METNO (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=pckA PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.385e-67
Identity = 123/232 (53.02%), Postives = 158/232 (68.10%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            S  G+ N EGGCYAK I LSRE EP+I+    +FGTV+EN+V D  TR  D+ D S TENTR AYP+ +IPNA       HPKNI++L CDAFGVLPP++KL+  + MYHF+SGYTA VAGTE+G+K P ATFS CFGA F+  HP+ Y  +L + + +H    WLVNTGW+GG  G+G R+ +  TRR++ A   G+L +A + + P FG   PT + GV   IL P KTW
Sbjct:  262 SPKGIFNFEGGCYAKTIRLSREAEPEIYATTERFGTVMENVVIDPVTRLPDFDDASRTENTRCAYPLPFIPNASPTGRAGHPKNIVMLTCDAFGVLPPIAKLTGAEAMYHFLSGYTAKVAGTEKGLKGPEATFSTCFGAPFMPRHPSVYGNLLRDLIARHHVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLTAALDGSLAKADFRRDPYFGFAVPTSVPGVEPHILYPVKTW 493          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJD (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=pckA PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.385e-67
Identity = 127/231 (54.98%), Postives = 160/231 (69.26%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G+ EP+ATFSACFG  F+ LHPT YA +L EK++K+    +LVNTGWSGGSYG G R+ +  TR  I+AI  G++ +  +    VF L  P  ++GV S +L+P  TW+
Sbjct:  256 DEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKYEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESTLLNPINTWS 485          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_THET8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pckA PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 3.115e-67
Identity = 131/254 (51.57%), Postives = 166/254 (65.35%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQGYTP*SLGNPFQKKF 827
            S++GV N EGGCYAK I LS E EP I+ A  +F  +LEN+V +  +R V + D S TENTR++YPI ++ N     V  HP+ I  L+ DA+GVLPP+++LS E+ MY+F+SGYTA VAGTE GV EPRATFSACFGA F+ +HP  YA ML EK++KH    +LVNTGW+GG YG G R  L  TR ++ A  SG L    Y + PVFG E P E  GVP E+L+P +TWA  E         L   FQ+ F
Sbjct:  258 SEDGVFNFEGGCYAKVIRLSPEHEPLIYKASNQFEAILENVVVNPESRRVQWDDDSKTENTRSSYPIAHLENVVESGVAGHPRAIFFLSADAYGVLPPIARLSPEEAMYYFLSGYTARVAGTERGVTEPRATFSACFGAPFLPMHPGVYARMLGEKIRKHAPRVYLVNTGWTGGPYGVGYRFPLPVTRALLKAALSGALENVPYRRDPVFGFEVPLEAPGVPQELLNPRETWADKEAYDQQAR-KLARLFQENF 510          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_THET2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pckA PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 3.115e-67
Identity = 131/254 (51.57%), Postives = 166/254 (65.35%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQGYTP*SLGNPFQKKF 827
            S++GV N EGGCYAK I LS E EP I+ A  +F  +LEN+V +  +R V + D S TENTR++YPI ++ N     V  HP+ I  L+ DA+GVLPP+++LS E+ MY+F+SGYTA VAGTE GV EPRATFSACFGA F+ +HP  YA ML EK++KH    +LVNTGW+GG YG G R  L  TR ++ A  SG L    Y + PVFG E P E  GVP E+L+P +TWA  E         L   FQ+ F
Sbjct:  258 SEDGVFNFEGGCYAKVIRLSPEHEPLIYKASNQFEAILENVVVNPESRRVQWDDDSKTENTRSSYPIAHLKNVVESGVAGHPRAIFFLSADAYGVLPPIARLSPEEAMYYFLSGYTARVAGTERGVTEPRATFSACFGAPFLPMHPGVYARMLGEKIRKHAPRVYLVNTGWTGGPYGVGYRFPLPVTRALLKAALSGALENVPYRRDPVFGFEVPLEAPGVPQELLNPRETWADKEAYDQQAR-KLARLFQENF 510          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni (strain RM1221) GN=pckA PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 3.115e-67
Identity = 127/230 (55.22%), Postives = 159/230 (69.13%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D GV N EGGCYAK I+L+ E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G+ EP+ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSY  G R+ +  TR  I+AI  G++ +  +    VF L  P  ++GV S +L+P  TW
Sbjct:  256 DEGVFNFEGGCYAKTINLNPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYSVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNPINTW 484          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_BRUC2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=pckA PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 3.115e-67
Identity = 125/232 (53.88%), Postives = 162/232 (69.83%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            ++GV N EGGCYAK I LS E EP+I+    +FGTVLEN+V DE+ R+ D+ D S+TENTR AYP+++IPNA     G  PKNII+L  DAFGV+PP++KL+  Q MYHF+SGYTA VAGTE+GV EP ATFS CFGA F+  HP++Y  +L + + +H    WLVNTGW+GG+YG G R+ +  TR ++ A   G+L  A +   P FG   P E+ GV + ILDP  TWA
Sbjct:  263 EHGVFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLDEN-RQPDFDDGSLTENTRCAYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLVNTGWTGGAYGVGKRMPIKATRALLAAALDGSLNNAEFRIDPNFGFAVPVEVPGVENSILDPRSTWA 493          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_RHILW (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=pckA PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 5.313e-67
Identity = 123/233 (52.79%), Postives = 161/233 (69.10%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            S+NG+ N EGGCYAK I LS E EP+I+    +FGTVLEN+V +E  RE ++ D S+TENTR AYP+++IPNA       HPK II+L  DAFGV+PP+++L+ +Q MYHF+SGYTA VAGTE+GV EP ATFS CFGA F+  HP +Y  +L E + +HG   WLVNTGW+GG+YG+G R+ +  TR ++ A  +G L +  +     FG   P  + GV S ILDP  TWA
Sbjct:  262 SENGIFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLNER-REPNFDDGSLTENTRCAYPMDFIPNASETGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELISRHGVECWLVNTGWTGGAYGTGKRMPIKATRALLAAALTGELGQVEFRADTNFGFAVPVSVNGVDSSILDPRSTWA 493          
The following BLAST results are available for this feature:
BLAST of DY259738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BRUSU1.398e-6754.31Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_RHIL32.385e-6753.22Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_METRJ2.385e-6751.05Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_METNO2.385e-6753.02Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_CAMJD2.385e-6754.98Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_THET83.115e-6751.57Phosphoenolpyruvate carboxykinase [ATP] OS=Thermus... [more]
PCKA_THET23.115e-6751.57Phosphoenolpyruvate carboxykinase [ATP] OS=Thermus... [more]
PCKA_CAMJR3.115e-6755.22Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_BRUC23.115e-6753.88Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_RHILW5.313e-6752.79Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259738 ID=DY259738; Name=DY259738; organism=Citrus clementina; type=EST; length=1040bp
GATAATGGAGTATCTTTCCAGCAGTGCTCATCATCTCCAATTAAGTACCG
GTTATGATCAGTAGACAGAGTGATAATGGAGTATCAAACATTGAAGGCGG
GTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATATCT
GGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATGAG
CATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACTCG
TGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGATACCTTGTGTTG
GCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATGCATTTGGTGTA
CTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATGTACCACTTCAT
CAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGGTGTGAAGGAGC
CACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTATAATGCTACAC
CCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAGAAGCATGGGGC
TACTGGATGGTTGGTTAACACTGGCTGGTCAGGTGGAAGCTATGGGTCAG
GAAATCGTATTAAATTAGCTTTTACGAGAAGAATCATTGATGCAATACAT
TCTGGGACTCTTTTGGAGGCAAGCTACACAAAGACTCCAGTTTTTGGGCT
TGAGACCCCAACTGAGATAAAGGGAGTGCCCTCAGAAATCCTGGATCCAG
AAAAAACATGGGCCGGAAATGAAGGGCTACAGGGATACACTCCTTGAAGC
CTAGGAAACCCTTTTCAAAAAAAATTTTGAGGGGCTTTGGGAATCCACAG
AATTGGAAAGGAACACCAAGCCTTACCGGAGAGATTCCTGGCATCCGGCC
CCCTTTTCCTAATCAAAAGTCTTCAAAAACGAACCGGGGCGCCCAGGGGA
CACCAAAAAAATAAAAAAAAACCTTATTTCGCCAAGGCGAGCCATACGTG
TGGGTAAAACTAAAAAAAGCCCCCCTACCCCCTCCCGGGA
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