DY259738

Overview
NameDY259738
Unique NameDY259738
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_MESSB (Phosphoenolpyruvate carboxykinase [ATP] OS=Mesorhizobium sp. (strain BNC1) GN=pckA PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 2.468e-64
Identity = 121/231 (52.38%), Postives = 155/231 (67.10%), Query Frame = 3
Query:   75 NGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            +G+ N EGGCYAK I LSRE EP+I+    +FGTVLEN+V DEH    D+ D S TENTR AYP+ +I NA        PKN+I+L  DAFGV+PP++KL+  Q MYHF+SGYTA VAGTE+GV EP ATFS CFGA F+  HP+ Y  +L + + +H    WLVNTGW+GG+YG+G+R+ +  TR ++ A   G+L  A +   P FG   P  + GV   ILDP  TWA
Sbjct:  264 HGIFNFEGGCYAKTIKLSREAEPEIFATTERFGTVLENVVVDEHGVP-DFDDGSRTENTRCAYPLHFISNASETGRAGQPKNVIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSVYGNLLRDLIAEHEVDCWLVNTGWTGGAYGTGHRMPIKVTRALLSAALDGSLRTAQFRTDPNFGFAVPVAVPGVDGTILDPRSTWA 493          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_VIBVY (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio vulnificus (strain YJ016) GN=pckA PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 9.379e-64
Identity = 126/231 (54.55%), Postives = 159/231 (68.83%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+    +   +++ D S TENTR +YPI +I N   P   G H   +I L+ DAFGVLPPVSKL+ EQT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA +L ++M++ GA  +LVNTGW+    GSG RI +  TR IIDAI  G++ EA     P+F LE PT + GV   ILDP  T+
Sbjct:  276 DDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRNALLENVTV-RNDGSINFDDGSKTENTRVSYPIHHIENIVKPVSKGGHANKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTKYAEVLVKRMEEAGAEAYLVNTGWN----GSGKRISIQDTRGIIDAILDGSIEEAPTKHVPIFNLEVPTSLPGVDPTILDPRDTY 501          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_VIBVU (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio vulnificus GN=pckA PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.225e-63
Identity = 126/231 (54.55%), Postives = 159/231 (68.83%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+    +   +++ D S TENTR +YPI +I N   P   G H   +I L+ DAFGVLPPVSKL+ EQT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA +L ++M++ GA  +LVNTGW+    GSG RI +  TR IIDAI  G++ EA     P+F LE PT + GV   ILDP  T+
Sbjct:  276 DDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTV-RNDGSINFDDGSKTENTRVSYPIHHIENIVKPVSKGGHANKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTKYAEVLVKRMEEAGAEAYLVNTGWN----GSGKRISIQDTRGIIDAILDGSIEEAPTKHVPIFNLEVPTSLPGVDPTILDPRDTY 501          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_PHOLL (Phosphoenolpyruvate carboxykinase [ATP] OS=Photorhabdus luminescens subsp. laumondii GN=pckA PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 2.089e-63
Identity = 129/233 (55.36%), Postives = 161/233 (69.10%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENI-VFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            D+GV N EGGCYAK I+LS+E EPDI+NAIK   +LEN+ V  + T  VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ EQT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G + E      P+F L  PT + GV ++ILDP KT+A
Sbjct:  274 DDGVFNFEGGCYAKTINLSKEAEPDIYNAIKRDALLENVTVLTDGT--VDFRDGSKTENTRVSYPINHIENIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTPEQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAKAYLVNTGWN----GTGKRISIKDTRGIIDAILNGDIEETDTITLPIFDLAVPTALPGVDTDILDPRKTYA 500          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_IDILO (Phosphoenolpyruvate carboxykinase [ATP] OS=Idiomarina loihiensis GN=pckA PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 2.089e-63
Identity = 127/232 (54.74%), Postives = 162/232 (69.83%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGV-PSEILDPEKTW 761
            D+GV N EGGCYAK I+LS+E EPDI+NAI+   +LEN+  D++   VD+ D S TENTR +YPI +I N   P     H K +I L  DAFGVLPPVSKL+ EQ  YHF+SG+TA +AGTE GV EP  TFS+CFGAAF+ LHPT+YA +L ++M+  GA  +LVNTGW+    G+G RI +  TR IIDAI  G++ +A + + P F L  PTE+ GV  S ILDP KT+
Sbjct:  267 DDGVFNFEGGCYAKTINLSKEAEPDIYNAIRRDALLENVAVDDNG-VVDFDDNSKTENTRVSYPIYHIDNIVKPVSKAGHAKKVIFLTADAFGVLPPVSKLTKEQAQYHFLSGFTAKLAGTERGVTEPTPTFSSCFGAAFLSLHPTQYAEVLVKRMEAAGAEAYLVNTGWN----GTGKRISIKATRAIIDAILDGSIEDAEFVQLPHFNLAMPTELAGVEDSSILDPRKTY 493          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_VIBHB (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 4.655e-63
Identity = 125/231 (54.11%), Postives = 157/231 (67.97%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YP+ +I N   P   G H   +I L+ DAFGVLPPVSKL+ EQT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA +L ++M+  GA  +LVNTGW+    GSG RI +  TR IIDAI  G++ +A     P+F LE PT + GV   ILDP  T+
Sbjct:  276 DDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTV-RSDGSIDFDDGSKTENTRVSYPLYHIDNIVKPVSKGGHANKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTKYAEVLVKRMEAAGAEAYLVNTGWN----GSGKRISIQDTRGIIDAILDGSIEDAKTKHIPIFNLEVPTSLPGVDPSILDPRDTY 501          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ERWT9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 6.079e-63
Identity = 125/231 (54.11%), Postives = 156/231 (67.53%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D+GV N EGGCYAK I LS + EP+I+ AI+   +LEN+V   H   VDY D S TENTR +YPI +I N   P     H K +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  WLVNTGW+    GSG RI L  TR II+AI SG +  A  +  P+F LE P  + GV  ++LDP  ++
Sbjct:  274 DDGVFNFEGGCYAKTIKLSPQAEPEIYQAIRRDALLENVVV-RHDGSVDYDDGSKTENTRVSYPIYHIDNIVKPVSKAGHAKKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAEAWLVNTGWN----GSGKRISLKETRAIINAILSGEIAHAQTSTLPIFNLEMPDSLPGVDGKLLDPRNSY 499          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_VIBPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio parahaemolyticus GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 7.940e-63
Identity = 125/231 (54.11%), Postives = 157/231 (67.97%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YPI +I N   P   G H   +I L+ DAFGVLPPVSKL+ EQT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA +L ++M+  GA  +LVNTGW+    G+G RI +  TR IIDAI  G++ +A     P+F LE PT + GV   ILDP  T+
Sbjct:  276 DDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTV-RSDGSIDFDDGSKTENTRVSYPIYHIENIVKPVSKGGHANKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTKYAEVLVKRMEAAGAEAYLVNTGWN----GTGKRISIQDTRGIIDAILDGSIEDAPTKHIPIFNLEVPTSLPGVDPSILDPRDTY 501          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_PORGI (Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyromonas gingivalis GN=pckA PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.037e-62
Identity = 126/231 (54.55%), Postives = 159/231 (68.83%), Query Frame = 3
Query:   75 NGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            +G+ N EGGCYAK I+LSRE EPDI+NAI+   +LEN+  D    ++D+ DKSVTENTR +YPI +I N   P     H K +I L+ DAFGVLPPVS L+ EQT Y+F+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA  L +KM+  GAT +LVNTGW+    G+G RI +  TR IIDAI  G++ +A     P F  + PT + GV   ILDP  T+A
Sbjct:  271 DGIFNFEGGCYAKVINLSRENEPDIYNAIRRNALLENVTVDA-AGKIDFGDKSVTENTRVSYPIYHIENIVKPVSKAGHAKKVIFLSADAFGVLPPVSILTPEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEELVKKMEMVGATAYLVNTGWN----GTGKRISIKDTRGIIDAILDGSIDKAPTKAIPFFDFKVPTALPGVDPNILDPRDTYA 496          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_PORG3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=pckA PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.037e-62
Identity = 126/231 (54.55%), Postives = 159/231 (68.83%), Query Frame = 3
Query:   75 NGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            +G+ N EGGCYAK I+LSRE EPDI+NAI+   +LEN+  D    ++D+ DKSVTENTR +YPI +I N   P     H K +I L+ DAFGVLPPVS L+ EQT Y+F+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA  L +KM+  GAT +LVNTGW+    G+G RI +  TR IIDAI  G++ +A     P F  + PT + GV   ILDP  T+A
Sbjct:  271 DGIFNFEGGCYAKVINLSRENEPDIYNAIRRNALLENVTVDA-AGKIDFGDKSVTENTRVSYPIYHIENIVKPVSKAGHAKKVIFLSADAFGVLPPVSILTPEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEELVKKMEMVGATAYLVNTGWN----GTGKRISIKDTRGIIDAILDGSIDKAPTKAIPFFDFKVPTALPGVDPNILDPRDTYA 496          
The following BLAST results are available for this feature:
BLAST of DY259738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_MESSB2.468e-6452.38Phosphoenolpyruvate carboxykinase [ATP] OS=Mesorhi... [more]
PCKA_VIBVY9.379e-6454.55Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_VIBVU1.225e-6354.55Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_PHOLL2.089e-6355.36Phosphoenolpyruvate carboxykinase [ATP] OS=Photorh... [more]
PCKA_IDILO2.089e-6354.74Phosphoenolpyruvate carboxykinase [ATP] OS=Idiomar... [more]
PCKA_VIBHB4.655e-6354.11Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_ERWT96.079e-6354.11Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia... [more]
PCKA_VIBPA7.940e-6354.11Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_PORGI1.037e-6254.55Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyr... [more]
PCKA_PORG31.037e-6254.55Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyr... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259738 ID=DY259738; Name=DY259738; organism=Citrus clementina; type=EST; length=1040bp
GATAATGGAGTATCTTTCCAGCAGTGCTCATCATCTCCAATTAAGTACCG
GTTATGATCAGTAGACAGAGTGATAATGGAGTATCAAACATTGAAGGCGG
GTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATATCT
GGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATGAG
CATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACTCG
TGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGATACCTTGTGTTG
GCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATGCATTTGGTGTA
CTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATGTACCACTTCAT
CAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGGTGTGAAGGAGC
CACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTATAATGCTACAC
CCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAGAAGCATGGGGC
TACTGGATGGTTGGTTAACACTGGCTGGTCAGGTGGAAGCTATGGGTCAG
GAAATCGTATTAAATTAGCTTTTACGAGAAGAATCATTGATGCAATACAT
TCTGGGACTCTTTTGGAGGCAAGCTACACAAAGACTCCAGTTTTTGGGCT
TGAGACCCCAACTGAGATAAAGGGAGTGCCCTCAGAAATCCTGGATCCAG
AAAAAACATGGGCCGGAAATGAAGGGCTACAGGGATACACTCCTTGAAGC
CTAGGAAACCCTTTTCAAAAAAAATTTTGAGGGGCTTTGGGAATCCACAG
AATTGGAAAGGAACACCAAGCCTTACCGGAGAGATTCCTGGCATCCGGCC
CCCTTTTCCTAATCAAAAGTCTTCAAAAACGAACCGGGGCGCCCAGGGGA
CACCAAAAAAATAAAAAAAAACCTTATTTCGCCAAGGCGAGCCATACGTG
TGGGTAAAACTAAAAAAAGCCCCCCTACCCCCTCCCGGGA
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