DY259738

Overview
NameDY259738
Unique NameDY259738
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ESCF3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=pckA PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.037e-62
Identity = 126/238 (52.94%), Postives = 162/238 (68.07%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A +E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASSEQWQ 507          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_CITK8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=pckA PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.354e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDG-SIDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQASGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFNLPMFDLAIPTELPGVETRILDPRNTYASPEQWQ 506          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_PHOPR (Phosphoenolpyruvate carboxykinase [ATP] OS=Photobacterium profundum GN=pckA PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.769e-62
Identity = 124/231 (53.68%), Postives = 158/231 (68.40%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            DNGV N EGGCYAK I+LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YPI +I N   P   G H   +I L+ DAFGVLPPVSKL+  QT YHF+SG+TA +AGTE G+ EP  TFSACFG AF+ LHPT+YA +L ++M+  GA  +LVNTGW+    G+G RI +  TR IIDAI +G++  A   + P+F LE PT + GV  EILDP  T+
Sbjct:  264 DNGVFNFEGGCYAKTINLSKEAEPDIYNAIRRDALLENVTV-RADGAIDFDDNSKTENTRVSYPIYHIENIVKPVSKGGHANKVIFLSADAFGVLPPVSKLTPAQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGNAFLTLHPTQYAEVLVKRMEAAGAEAYLVNTGWN----GTGKRISIQDTRAIIDAILNGSIDNAETKEMPIFNLEVPTSLPGVNPEILDPRDTY 489          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.769e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDG-SIDFDDGSKTENTRVSYPIYHIENIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECO7I (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.769e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDG-SIDFDDGSKTENTRVSYPIYHIENIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SHISS (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella sonnei (strain Ss046) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SHIFL (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella flexneri GN=pckA PE=3 SV=4)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SHIF8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella flexneri serotype 5b (strain 8401) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SHIDS (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SHIBS (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella boydii serotype 4 (strain Sb227) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507          
The following BLAST results are available for this feature:
BLAST of DY259738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_ESCF31.037e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_CITK81.354e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Citroba... [more]
PCKA_PHOPR1.769e-6253.68Phosphoenolpyruvate carboxykinase [ATP] OS=Photoba... [more]
PCKA_ECOSM1.769e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO7I1.769e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_SHISS2.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_SHIFL2.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_SHIF82.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_SHIDS2.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_SHIBS2.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259738 ID=DY259738; Name=DY259738; organism=Citrus clementina; type=EST; length=1040bp
GATAATGGAGTATCTTTCCAGCAGTGCTCATCATCTCCAATTAAGTACCG
GTTATGATCAGTAGACAGAGTGATAATGGAGTATCAAACATTGAAGGCGG
GTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATATCT
GGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATGAG
CATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACTCG
TGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGATACCTTGTGTTG
GCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATGCATTTGGTGTA
CTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATGTACCACTTCAT
CAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGGTGTGAAGGAGC
CACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTATAATGCTACAC
CCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAGAAGCATGGGGC
TACTGGATGGTTGGTTAACACTGGCTGGTCAGGTGGAAGCTATGGGTCAG
GAAATCGTATTAAATTAGCTTTTACGAGAAGAATCATTGATGCAATACAT
TCTGGGACTCTTTTGGAGGCAAGCTACACAAAGACTCCAGTTTTTGGGCT
TGAGACCCCAACTGAGATAAAGGGAGTGCCCTCAGAAATCCTGGATCCAG
AAAAAACATGGGCCGGAAATGAAGGGCTACAGGGATACACTCCTTGAAGC
CTAGGAAACCCTTTTCAAAAAAAATTTTGAGGGGCTTTGGGAATCCACAG
AATTGGAAAGGAACACCAAGCCTTACCGGAGAGATTCCTGGCATCCGGCC
CCCTTTTCCTAATCAAAAGTCTTCAAAAACGAACCGGGGCGCCCAGGGGA
CACCAAAAAAATAAAAAAAAACCTTATTTCGCCAAGGCGAGCCATACGTG
TGGGTAAAACTAAAAAAAGCCCCCCTACCCCCTCCCGGGA
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