DY259738

Overview
NameDY259738
Unique NameDY259738
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECO8A (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O8 (strain IAI1) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECO81 (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O81 (strain ED1a) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIENIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECO5E (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECO57 (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O157:H7 GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECO55 (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli (strain 55989 / EAEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECO45 (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIENIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECO27 (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECO24 (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62
Identity = 126/238 (52.94%), Postives = 161/238 (67.65%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV ++ILDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQ 507
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_PROMH (Phosphoenolpyruvate carboxykinase [ATP] OS=Proteus mirabilis (strain HI4320) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 3.017e-62
Identity = 129/232 (55.60%), Postives = 158/232 (68.10%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            D+GV N EGGCYAK I LS+E EPDI+ AIK   +LEN+V       VD+ D S TENTR +YPI +I N   P     H K +I L  DAFGVLPPV++L+ EQT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G + +A     PVF L  PT + GV SEILDP  T+A
Sbjct:  274 DDGVFNFEGGCYAKTIHLSKEAEPDIYGAIKRDALLENVVVLADG-SVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHAKKVIFLTADAFGVLPPVARLTPEQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPTQYAQVLVKRMQACGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGDIDKAETQTLPVFNLAIPTALPGVNSEILDPRDTYA 500
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_BACFR (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides fragilis GN=pckA PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 3.017e-62
Identity = 126/232 (54.31%), Postives = 158/232 (68.10%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            + GV N EGGCYAK I+L +E EPDI+NAIK   +LEN+      + +++ DKSVTENTR +YPI +I N   P   GPH K +I L+ DAFGVLPPVS L+ EQ  Y+F+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA  L +KM+  GA  +LVNTGW+    GSG RI +  TR IIDAI  G++ +A     P F    PTE+ GV  +ILDP  T+A
Sbjct:  270 NEGVFNYEGGCYAKVINLDKESEPDIFNAIKRDALLENVTVAADGK-INFADKSVTENTRVSYPIYHIENIVKPVSKGPHAKQVIFLSADAFGVLPPVSILNPEQAQYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEELVKKMEMTGAKAYLVNTGWN----GSGKRISIKDTRGIIDAILDGSIDKAPTKVIPFFDFVVPTELPGVDPKILDPRDTYA 496
The following BLAST results are available for this feature:
BLAST of DY259738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_ECO8A2.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO812.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO5E2.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO572.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO552.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO452.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO272.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO242.310e-6252.94Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_PROMH3.017e-6255.60Phosphoenolpyruvate carboxykinase [ATP] OS=Proteus... [more]
PCKA_BACFR3.017e-6254.31Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259738 ID=DY259738; Name=DY259738; organism=Citrus clementina; type=EST; length=1040bp
GATAATGGAGTATCTTTCCAGCAGTGCTCATCATCTCCAATTAAGTACCG
GTTATGATCAGTAGACAGAGTGATAATGGAGTATCAAACATTGAAGGCGG
GTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATATCT
GGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATGAG
CATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACTCG
TGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGATACCTTGTGTTG
GCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATGCATTTGGTGTA
CTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATGTACCACTTCAT
CAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGGTGTGAAGGAGC
CACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTATAATGCTACAC
CCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAGAAGCATGGGGC
TACTGGATGGTTGGTTAACACTGGCTGGTCAGGTGGAAGCTATGGGTCAG
GAAATCGTATTAAATTAGCTTTTACGAGAAGAATCATTGATGCAATACAT
TCTGGGACTCTTTTGGAGGCAAGCTACACAAAGACTCCAGTTTTTGGGCT
TGAGACCCCAACTGAGATAAAGGGAGTGCCCTCAGAAATCCTGGATCCAG
AAAAAACATGGGCCGGAAATGAAGGGCTACAGGGATACACTCCTTGAAGC
CTAGGAAACCCTTTTCAAAAAAAATTTTGAGGGGCTTTGGGAATCCACAG
AATTGGAAAGGAACACCAAGCCTTACCGGAGAGATTCCTGGCATCCGGCC
CCCTTTTCCTAATCAAAAGTCTTCAAAAACGAACCGGGGCGCCCAGGGGA
CACCAAAAAAATAAAAAAAAACCTTATTTCGCCAAGGCGAGCCATACGTG
TGGGTAAAACTAAAAAAAGCCCCCCTACCCCCTCCCGGGA
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