DY259738

Overview
NameDY259738
Unique NameDY259738
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_BACFN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 3.017e-62
Identity = 126/232 (54.31%), Postives = 158/232 (68.10%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            + GV N EGGCYAK I+L +E EPDI+NAIK   +LEN+      + +++ DKSVTENTR +YPI +I N   P   GPH K +I L+ DAFGVLPPVS L+ EQ  Y+F+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA  L +KM+  GA  +LVNTGW+    GSG RI +  TR IIDAI  G++ +A     P F    PTE+ GV  +ILDP  T+A
Sbjct:  270 NEGVFNYEGGCYAKVINLDKESEPDIFNAIKRDALLENVTVAADGK-INFADKSVTENTRVSYPIYHIENIVKPVSKGPHAKQVIFLSADAFGVLPPVSILNPEQAQYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEELVKKMEMTGAKAYLVNTGWN----GSGKRISIKDTRGIIDAILDGSIDKAPTKVIPFFDFVVPTELPGVDPKILDPRDTYA 496          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_PECCP (Phosphoenolpyruvate carboxykinase [ATP] OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.940e-62
Identity = 130/239 (54.39%), Postives = 162/239 (67.78%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENI-VFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EPDI+ AIK   +LEN+ V  + T  VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+MLHPT+YA +L ++M+  GA  +LVNTGW+    GSG RI +  TR IIDAI +G++ +A     PVF L  PT + GV  +ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPDIYGAIKRDALLENVTVLADGT--VDFNDGSKTENTRVSYPIYHIQNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTSDQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLMLHPTQYAEVLVKRMKAAGAQAYLVNTGWN----GSGKRISIKDTRGIIDAILNGSIDDAEMQTLPVFDLAIPTSLPGVNPDILDPRDTYASVEQWQ 506          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ECOL6 (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O6 GN=pckA PE=3 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 3.940e-62
Identity = 125/238 (52.52%), Postives = 161/238 (67.65%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A     P+F L  PTE+ GV +++LDP  T+A  E  Q
Sbjct:  275 DDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGT-IDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKLLDPRNTYASPEQWQ 507          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_COLP3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.940e-62
Identity = 123/231 (53.25%), Postives = 157/231 (67.97%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            DNGV N EGGCYAK I+LS+E EPDI+NAI+   +LEN+  D + + +D+ D S TENTR +YPI +I N   P     H K +I L  DAFGVLPPV+KL+ EQT Y+F+SG+TA +AGTE G+ EP  TFS+CFGAAF+ LHPT+YA +L ++M   GA  +LVNTGW+    G+G RI +  TR IIDAI  G++  A     P F LE P  I GV  +ILDP  T+
Sbjct:  271 DNGVFNFEGGCYAKTINLSKENEPDIYNAIRRDALLENVTVDANGK-IDFDDNSKTENTRVSYPIHHIDNIVKPVSRAGHAKKVIFLTADAFGVLPPVAKLTPEQTEYYFLSGFTAKLAGTERGITEPTPTFSSCFGAAFLSLHPTQYAEVLHKRMDDAGAEAYLVNTGWN----GTGKRISIKATRAIIDAILDGSIDNAETETVPFFNLEVPKVIAGVEGDILDPRNTY 496          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ERWCT (Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia carotovora subsp. atroseptica GN=pckA PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62
Identity = 129/238 (54.20%), Postives = 160/238 (67.23%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EPDI+ AIK   +LEN+        VD+ D S TENTR +YPI +I N   P     H   +ILL  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+MLHPT+YA +L ++M+  GA  +LVNTGW+    GSG RI +  TR IIDAI +G++ +A     PVF L  PT + GV  +ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPDIFGAIKRDALLENVTVLADGA-VDFNDGSKTENTRVSYPIYHIHNIVKPVSKAGHATKVILLTADAFGVLPPVSRLTSDQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLMLHPTQYAEVLVKRMKASGAQAYLVNTGWN----GSGKRISIKDTRGIIDAILNGSIDDAEMQTLPVFDLAIPTSLPGVNPDILDPRDTYASIEQWQ 506          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ACTPJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62
Identity = 125/232 (53.88%), Postives = 158/232 (68.10%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            D+GV N EGGCYAK I+LS E EPDI+ AI+   +LEN+V  E    VD+ D S TENTR +YPI +I N   P     H K +I L  DAFGVLPPVSKL+ EQT Y+F+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA +L ++M++ G+  +LVNTGW+    GSG RI +  TR IIDAI  G++ +A   + P+F L  PT +  V   ILDP  T+A
Sbjct:  271 DDGVFNYEGGCYAKTINLSEENEPDIYRAIRRDALLENVVVREDG-SVDFADGSKTENTRVSYPIHHIDNIVEPVSKAGHAKKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEVLVKRMEEAGSQAYLVNTGWN----GSGKRISIKDTRGIIDAILDGSIEKAETKELPIFNLAIPTALPNVDPAILDPRDTYA 497          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ACTP7 (Phosphoenolpyruvate carboxykinase [ATP] OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62
Identity = 125/232 (53.88%), Postives = 158/232 (68.10%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            D+GV N EGGCYAK I+LS E EPDI+ AI+   +LEN+V  E    VD+ D S TENTR +YPI +I N   P     H K +I L  DAFGVLPPVSKL+ EQT Y+F+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA +L ++M++ G+  +LVNTGW+    GSG RI +  TR IIDAI  G++ +A   + P+F L  PT +  V   ILDP  T+A
Sbjct:  271 DDGVFNYEGGCYAKTINLSEENEPDIYRAIRRDALLENVVVREDG-SVDFADGSKTENTRVSYPIHHIDNIVEPVSKAGHAKKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEVLVKRMEEAGSQAYLVNTGWN----GSGKRISIKDTRGIIDAILDGSIEKAETKELPIFNLAIPTALPNVDPAILDPRDTYA 497          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ACTP2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62
Identity = 125/232 (53.88%), Postives = 158/232 (68.10%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            D+GV N EGGCYAK I+LS E EPDI+ AI+   +LEN+V  E    VD+ D S TENTR +YPI +I N   P     H K +I L  DAFGVLPPVSKL+ EQT Y+F+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPTKYA +L ++M++ G+  +LVNTGW+    GSG RI +  TR IIDAI  G++ +A   + P+F L  PT +  V   ILDP  T+A
Sbjct:  271 DDGVFNYEGGCYAKTINLSEENEPDIYRAIRRDALLENVVVREDG-SVDFADGSKTENTRVSYPIHHIDNIVEPVSKAGHAKKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEVLVKRMEEAGSQAYLVNTGWN----GSGKRISIKDTRGIIDAILDGSIEKAETKELPIFNLAIPTALPNVDPAILDPRDTYA 497          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_VIBCM (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 124/231 (53.68%), Postives = 157/231 (67.97%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YPI +I N   P   G H   +I L+ DAFGVLPPVSKL+ EQT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++M+  GA  +LVNTGW+    GSG RI +  TR IIDAI  G++ +A     P+F L+ PT + GV   ILDP  T+
Sbjct:  276 DDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTV-RSDGSIDFDDGSKTENTRVSYPIYHIDNIVKPVSKGGHATKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTQYAEVLVKRMEAAGAEAYLVNTGWN----GSGKRISIKDTRGIIDAILDGSIEKAETKHIPIFNLQVPTALPGVDPMILDPRDTY 501          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_VIBCH (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio cholerae GN=pckA PE=3 SV=3)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 124/231 (53.68%), Postives = 157/231 (67.97%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YPI +I N   P   G H   +I L+ DAFGVLPPVSKL+ EQT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++M+  GA  +LVNTGW+    GSG RI +  TR IIDAI  G++ +A     P+F L+ PT + GV   ILDP  T+
Sbjct:  276 DDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTV-RSDGSIDFDDGSKTENTRVSYPIYHIDNIVKPVSKGGHATKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTQYAEVLVKRMEAAGAEAYLVNTGWN----GSGKRISIKDTRGIIDAILDGSIEKAETKHIPIFNLQVPTALPGVDPMILDPRDTY 501          
The following BLAST results are available for this feature:
BLAST of DY259738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACFN3.017e-6254.31Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]
PCKA_PECCP3.940e-6254.39Phosphoenolpyruvate carboxykinase [ATP] OS=Pectoba... [more]
PCKA_ECOL63.940e-6252.52Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_COLP33.940e-6253.25Phosphoenolpyruvate carboxykinase [ATP] OS=Colwell... [more]
PCKA_ERWCT5.146e-6254.20Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia... [more]
PCKA_ACTPJ5.146e-6253.88Phosphoenolpyruvate carboxykinase [ATP] OS=Actinob... [more]
PCKA_ACTP75.146e-6253.88Phosphoenolpyruvate carboxykinase [ATP] OS=Actinob... [more]
PCKA_ACTP25.146e-6253.88Phosphoenolpyruvate carboxykinase [ATP] OS=Actinob... [more]
PCKA_VIBCM6.721e-6253.68Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_VIBCH6.721e-6253.68Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259738 ID=DY259738; Name=DY259738; organism=Citrus clementina; type=EST; length=1040bp
GATAATGGAGTATCTTTCCAGCAGTGCTCATCATCTCCAATTAAGTACCG
GTTATGATCAGTAGACAGAGTGATAATGGAGTATCAAACATTGAAGGCGG
GTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATATCT
GGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATGAG
CATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACTCG
TGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGATACCTTGTGTTG
GCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATGCATTTGGTGTA
CTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATGTACCACTTCAT
CAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGGTGTGAAGGAGC
CACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTATAATGCTACAC
CCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAGAAGCATGGGGC
TACTGGATGGTTGGTTAACACTGGCTGGTCAGGTGGAAGCTATGGGTCAG
GAAATCGTATTAAATTAGCTTTTACGAGAAGAATCATTGATGCAATACAT
TCTGGGACTCTTTTGGAGGCAAGCTACACAAAGACTCCAGTTTTTGGGCT
TGAGACCCCAACTGAGATAAAGGGAGTGCCCTCAGAAATCCTGGATCCAG
AAAAAACATGGGCCGGAAATGAAGGGCTACAGGGATACACTCCTTGAAGC
CTAGGAAACCCTTTTCAAAAAAAATTTTGAGGGGCTTTGGGAATCCACAG
AATTGGAAAGGAACACCAAGCCTTACCGGAGAGATTCCTGGCATCCGGCC
CCCTTTTCCTAATCAAAAGTCTTCAAAAACGAACCGGGGCGCCCAGGGGA
CACCAAAAAAATAAAAAAAAACCTTATTTCGCCAAGGCGAGCCATACGTG
TGGGTAAAACTAAAAAAAGCCCCCCTACCCCCTCCCGGGA
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