DY259738

Overview
NameDY259738
Unique NameDY259738
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_VIBC3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 124/231 (53.68%), Postives = 157/231 (67.97%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YPI +I N   P   G H   +I L+ DAFGVLPPVSKL+ EQT YHF+SG+TA +AGTE G+ EP  TFSACFGAAF+ LHPT+YA +L ++M+  GA  +LVNTGW+    GSG RI +  TR IIDAI  G++ +A     P+F L+ PT + GV   ILDP  T+
Sbjct:  276 DDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTV-RSDGSIDFDDGSKTENTRVSYPIYHIDNIVKPVSKGGHATKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTQYAEVLVKRMEAAGAEAYLVNTGWN----GSGKRISIKDTRGIIDAILDGSIEKAETKHIPIFNLQVPTALPGVDPMILDPRDTY 501
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SALTI (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella typhi GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+  QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A   + P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGT-VDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQ 506
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SALSV (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella schwarzengrund (strain CVM19633) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+  QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A   + P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGT-VDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQ 506
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SALPK (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi A (strain AKU_12601) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+  QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A   + P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGT-VDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQ 506
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SALPC (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi C (strain RKS4594) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+  QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A   + P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGT-VDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQ 506
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SALPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+  QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A   + P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGT-VDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQ 506
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SALPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi A GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+  QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A   + P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGT-VDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQ 506
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SALNS (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella newport (strain SL254) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+  QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A   + P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGT-VDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQ 506
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SALHS (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella heidelberg (strain SL476) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+  QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A   + P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGT-VDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQ 506
[Close]
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SALG2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 3 
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVS+L+  QT YHF+SG+TA +AGTE GV EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G+G RI +  TR IIDAI +G+L  A   + P+F L  PTE+ GV + ILDP  T+A  E  Q
Sbjct:  274 DDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGT-VDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQ 506
The following BLAST results are available for this feature:
BLAST of DY259738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_VIBC36.721e-6253.68Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_SALTI6.721e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALSV6.721e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPK6.721e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPC6.721e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPB6.721e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPA6.721e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALNS6.721e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALHS6.721e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALG26.721e-6253.36Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259738 ID=DY259738; Name=DY259738; organism=Citrus clementina; type=EST; length=1040bp
GATAATGGAGTATCTTTCCAGCAGTGCTCATCATCTCCAATTAAGTACCG
GTTATGATCAGTAGACAGAGTGATAATGGAGTATCAAACATTGAAGGCGG
GTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATATCT
GGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATGAG
CATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACTCG
TGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGATACCTTGTGTTG
GCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATGCATTTGGTGTA
CTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATGTACCACTTCAT
CAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGGTGTGAAGGAGC
CACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTATAATGCTACAC
CCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAGAAGCATGGGGC
TACTGGATGGTTGGTTAACACTGGCTGGTCAGGTGGAAGCTATGGGTCAG
GAAATCGTATTAAATTAGCTTTTACGAGAAGAATCATTGATGCAATACAT
TCTGGGACTCTTTTGGAGGCAAGCTACACAAAGACTCCAGTTTTTGGGCT
TGAGACCCCAACTGAGATAAAGGGAGTGCCCTCAGAAATCCTGGATCCAG
AAAAAACATGGGCCGGAAATGAAGGGCTACAGGGATACACTCCTTGAAGC
CTAGGAAACCCTTTTCAAAAAAAATTTTGAGGGGCTTTGGGAATCCACAG
AATTGGAAAGGAACACCAAGCCTTACCGGAGAGATTCCTGGCATCCGGCC
CCCTTTTCCTAATCAAAAGTCTTCAAAAACGAACCGGGGCGCCCAGGGGA
CACCAAAAAAATAAAAAAAAACCTTATTTCGCCAAGGCGAGCCATACGTG
TGGGTAAAACTAAAAAAAGCCCCCCTACCCCCTCCCGGGA
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