DY259745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259745 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.026e-22 Identity = 74/250 (29.60%), Postives = 110/250 (44.00%), Query Frame = 1 Query: 82 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXXSFKSAIWFWMTAQPQSHRATKSLSTNGNHQQLK*TPAGFPGYGLTTNIIHGGIECGQGGNDPVPTPIGFLTPFRWQVGDS 822 CG G G D G + I+++E F D + + CP + FYT F+EA A+P FG + RKREIAA+FA ET CYI + A++YC + PC +Y+GRGP+QL+WN NY+ G+ L SFK+++WFW+ + + + + N G+G T II+GG EC + +G+ + Q+G S Sbjct: 25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHET-------------GHLCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI------RKGVQYVILDPNQ-----------GFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVS 243
BLAST of DY259745 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.750e-22 Identity = 70/231 (30.30%), Postives = 101/231 (43.72%), Query Frame = 1 Query: 85 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXXSFKSAIWFWMTAQPQSHRATKSLSTNGNHQQLK*TPAGFPGYGLTTNIIHGGIECGQGGNDP 768 G G G G G+ G + +++ F + C + FYT AF+ A A+P F + G E KREIAAFFA ET +CYI ++++ ++ YC R PC +YYGRGP+Q++WN NY G +G +FK+A+WFWM + +G Q G+G T I+G +EC GN+P Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGS-GCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGH-------------FCYISEINK-SNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMN------------NVHGVMPQ---------GFGATIRAINGALEC--NGNNP 253
BLAST of DY259745 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 5.630e-21 Identity = 72/249 (28.92%), Postives = 100/249 (40.16%), Query Frame = 1 Query: 82 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC----YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXXSFKSAIWFWMTAQPQSHRATKSLSTNGNHQQLK*TPAGFPGYGLTTNIIHGGIECGQGGNDPVPTPIGFLTPFRWQVG 816 CG+G G T + I F + + + D C + FYT DAF+ A ++ FG G+E KREIAA FA ET +CYI ++ + DYC PC Y+GRGPIQL+WN NY G A SFK+A+W+WM Q ++ P G+G T I+G +EC V + + T + Q+G Sbjct: 47 CGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM-------------------QHVR--PVINQGFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLG 261
BLAST of DY259745 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 9.603e-21 Identity = 70/255 (27.45%), Postives = 100/255 (39.22%), Query Frame = 1 Query: 67 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXXSFKSAIWFWMTAQPQSHRATKSLSTNGNHQQLK*TPAGFPGYGLTTNIIHGGIECGQGGNDPVPTPIGFLTPFRWQVGDS 822 G G G G G + + E F + + + C + FYT +F+ AA+++ F N KREIAAFFA ET CYI +++ DYC + PC +YYGRGP+Q++WN NY G+ +G SFK+A+WFWM N HQ + G+G T I+G +EC V + + + Q G S Sbjct: 58 GPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------NNVHQVMS------QGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVS 278
BLAST of DY259745 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.139e-20 Identity = 72/257 (28.02%), Postives = 102/257 (39.69%), Query Frame = 1 Query: 82 CGSGVVCGERDTGHGTDGGELG---------KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXXSFKSAIWFWMTAQPQSHRATKSLSTNGNHQQLK*TPAGFPGYGLTTNIIHGGIECGQGGNDPVPTPIGFLTPFRWQVG 816 C SG G G G GG G + + E F + + + C + FYT +F+ AA ++ F KREIAAFFA ET CYI +++ + DYC + PC +YYGRGP+Q++WN NY G+ +G SFK+A+WFWM N HQ + G+G T I+G +EC V + + + Q G Sbjct: 57 CRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------NNVHQVM------LQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFG 279 The following BLAST results are available for this feature:
BLAST of DY259745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259745 ID=DY259745; Name=DY259745; organism=Citrus clementina; type=EST; length=1023bpback to top |