DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: ALH13_CAEEL (Probable delta-1-pyrroline-5-carboxylate synthetase OS=Caenorhabditis elegans GN=alh-13 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20
Identity = 52/120 (43.33%), Postives = 77/120 (64.17%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL--DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            EQ+ EL   G ++++VSSGAV  GRQ+LR   +++ S+    +  + +  D +ACAA G   LM+LY+ LF Q  +T +Q+L+T  D  D+  RK L  T++SLL L +IPI N NDAV+
Sbjct:  109 EQVSELQQSGRQMLIVSSGAVAFGRQKLRQELVMSMSMRQTLRGPSGMTADKRACAASGMPGLMSLYEQLFQQYGITVAQVLLTKPDIDDDQRRKNLQATIESLLSLNIIPIVNANDAVA 228          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PROMS (Glutamate 5-kinase OS=Prochlorococcus marinus (strain AS9601) GN=proB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 3
Query:  192 SQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            S+G ++ILV+SGAVG+G Q+L  +   N  L+ LQ         A AAVGQ +LM+LYD +F++L +  +Q+L+T +DF   +       T++ L+DL VIPI NEND V+  +  Y
Sbjct:   37 SKGNKLILVTSGAVGLGCQKLNIKTRPND-LSTLQ---------ATAAVGQVNLMSLYDKVFNRLGLNIAQILITKADFNSRESFNNASKTLKRLIDLNVIPIVNENDTVANEELKY 143          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PROM0 (Glutamate 5-kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=proB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 3
Query:  192 SQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            S+G ++ILV+SGAVG+G Q+L  +   N  L+ LQ         A AAVGQ +LM+LYD +F++L +  +Q+L+T +DF   +       T++ L+DL VIPI NEND V+  +  Y
Sbjct:   37 SKGNKLILVTSGAVGLGCQKLNIKTRPND-LSTLQ---------ATAAVGQVNLMSLYDKVFNKLGLNIAQILITKADFNSRESFNNASKTLKRLIDLNVIPIVNENDTVANEELKY 143          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SYNJA (Glutamate 5-kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=proB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.771e-15
Identity = 54/130 (41.54%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVSCSL 560
            E L  L SQG+ +ILVSSGAVG+G  RL  R          Q+P    + +A AAVGQ  L+ LYD LFS L+   +Q+L+T  DF +         T   LL + VIPI NEND V+  +  +  + SL
Sbjct:   35 EVLTRLRSQGYAVILVSSGAVGIGCARLGLR----------QRPTAIAEKQAVAAVGQGRLIRLYDDLFSALNQPIAQVLLTRGDFVERSRYVNANRTFTQLLQMGVIPIVNENDTVAVEELKFGDNDSL 154          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_HERAR (Glutamate 5-kinase OS=Herminiimonas arsenicoxydans GN=proB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.771e-15
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            EQ+ +L + G E++LVSSGA+  G QRL + K          +P    + +ACAAVGQ  L  +Y+T F Q  V ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   37 EQIVQLRALGKEVVLVSSGAIAEGMQRLGFDK----------RPTGVHELQACAAVGQMGLAQIYETSFRQHQVQTAQILLTHADLADRERYLNARSTLFTLLQLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_NITMU (Glutamate 5-kinase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=proB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15
Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+ +L   G E++LVSSGA+  G QRL+++K          +P    + +A AAVGQ  L+  Y+T F + ++ S+Q+L+T  D  D         T+ +LLDL VIPI NEND V+T
Sbjct:   38 QIVKLKKTGKEVVLVSSGAIAEGMQRLKWKK----------RPHAVHELQAAAAVGQMGLVQAYETCFRKHELHSAQILLTHEDLSDRKRYLNARSTLATLLDLNVIPIINENDTVAT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_THEEB (Glutamate 5-kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=proB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15
Identity = 50/118 (42.37%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            E L     +G  ++LVSSGAVGVG  RL             ++PQ     +A AAVGQ  LM +YD LF+ L    +Q+LVT  +F D      +Y+T Q+L +L VIPI NEND V+
Sbjct:   32 EVLCHCQRRGDRVVLVSSGAVGVGAMRLGLT----------ERPQQLAQKQAVAAVGQGHLMRMYDDLFAVLRQPIAQILVTRQNFVDRQSYLNIYNTFQALFELGVIPIVNENDTVA 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PROM9 (Glutamate 5-kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=proB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.154e-15
Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 3
Query:  195 QGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            +G ++ILV+SGAVG+G Q+L  +   N  L+ LQ         A AAVGQ +LM+LYD +F++L    +Q+L+T +DF   +       T++ L+DL VIPI NEND V+  +  Y
Sbjct:   38 KGNKLILVTSGAVGLGCQKLNIKTRPND-LSTLQ---------ATAAVGQVNLMSLYDKIFNKLGHNIAQILITKADFNSRESFNNASKTLKKLIDLNVIPIVNENDTVANEELKY 143          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PROM2 (Glutamate 5-kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=proB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.154e-15
Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 3
Query:  192 SQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            S+G +IILV+SGAVG+G Q+L      N  L+ LQ         A AAVGQ +LM+LYD +F++L    +Q+L+T +DF           T++ L+DL VIPI NEND V+  +  Y
Sbjct:   37 SKGNKIILVTSGAVGLGCQKLNIETRPND-LSTLQ---------ATAAVGQVNLMSLYDKVFNKLGHNIAQILITKADFNSRKSFNNASKTLKKLIDLNVIPIVNENDTVANEELKY 143          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_MANSM (Glutamate 5-kinase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=proB PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.154e-15
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            QL +L+ +G+ +++V+SGA+  GR  L + KL          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD R+IP+ NENDAV+T
Sbjct:   38 QLAQLHQEGYRLVIVTSGAMAAGRHYLNHPKL----------PPTIASKQLLAAVGQSQLIQTWEQLFAIYDIHIGQLLLTRADIEDRERFLNARDTLHALLDNRIIPVVNENDAVAT 145          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
ALH13_CAEEL4.074e-2043.33Probable delta-1-pyrroline-5-carboxylate synthetas... [more]
PROB_PROMS1.038e-1541.88Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_PROM01.038e-1541.88Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_SYNJA1.771e-1541.54Glutamate 5-kinase OS=Synechococcus sp. (strain JA... [more]
PROB_HERAR1.771e-1540.34Glutamate 5-kinase OS=Herminiimonas arsenicoxydans... [more]
PROB_NITMU3.021e-1539.83Glutamate 5-kinase OS=Nitrosospira multiformis (st... [more]
PROB_THEEB3.946e-1542.37Glutamate 5-kinase OS=Thermosynechococcus elongatu... [more]
PROB_PROM95.154e-1541.38Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_PROM25.154e-1542.74Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_MANSM5.154e-1538.14Glutamate 5-kinase OS=Mannheimia succiniciproducen... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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