DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_CYAP4 (Glutamate 5-kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=proB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.269e-13
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            E L +L  QG  I+LVSSGAVGVG  RL             ++P+     +A AAVGQ  LM +YD  F+ L+   +Q+L+T  D          Y+T Q L +L VIPI NEND V+
Sbjct:   32 ETLSKLRRQGQRIVLVSSGAVGVGCGRLGLS----------ERPRTMALKQAVAAVGQGRLMRIYDDFFTTLNQPIAQVLLTRGDLVQRQRYLNAYNTFQELFNLGVIPIVNENDTVA 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_ACAM1 (Glutamate 5-kinase OS=Acaryochloris marina (strain MBIC 11017) GN=proB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.269e-13
Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            E L +L  +G ++ILVSSGAVG+G  RL         LA+  +P+     +A AAVGQ  LM +YD  F+ L    +Q+L+T  D  D        +T+Q LL L VIPI NEND V+
Sbjct:   32 EVLSQLRQEGNQVILVSSGAVGIGCARL--------GLAE--RPKAIALKQAVAAVGQGRLMRIYDDFFTSLQQPIAQVLLTRGDLADRSRYINASNTLQELLKLGVIPIVNENDTVA 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SERP5 (Glutamate 5-kinase OS=Serratia proteamaculans (strain 568) GN=proB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADLEDRERFLNARDTMTALLDNRIVPVINENDAVAT 141          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SERMA (Glutamate 5-kinase OS=Serratia marcescens GN=proB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADLEDRERFLNARDTMTALLDNRIVPVINENDAVAT 141          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_ENTS8 (Glutamate 5-kinase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=proB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLTALLDNRIVPVINENDAVAT 141          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURVG (Glutamate 5-kinase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=proB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWNK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHHIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURPP (Glutamate 5-kinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=proB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWTK----------RPREIDELQAAAAVGQMGLAQVYESRFAEHSIQTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_CYAP8 (Glutamate 5-kinase OS=Cyanothece sp. (strain PCC 8801) GN=proB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 48/124 (38.71%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            E L +L   G  IILVSSGAVGVG  RL  +          ++P+     +A AAVGQ  L+ +YD LF+ L    +Q+L+T  +  +        +T +SLL+L VIPI NEND V+  +  +
Sbjct:   32 ETLTQLRQLGHRIILVSSGAVGVGCSRLNLK----------ERPKKMAMKQAIAAVGQGRLIRVYDDLFNTLGQPIAQVLLTRRELIERSCYVNASNTFESLLELGVIPIVNENDTVAIEELKF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURP8 (Glutamate 5-kinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=proB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L  QG E++LVSSGA+  G QRL + +          +P+   + +A AAVGQ  L  +Y++ FS+  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALREQGKEVVLVSSGAIAEGMQRLGWTR----------RPREIDELQAAAAVGQMGLAQVYESRFSEHSIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURM1 (Glutamate 5-kinase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=proB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_CYAP41.269e-1341.53Glutamate 5-kinase OS=Cyanothece sp. (strain PCC 7... [more]
PROB_ACAM11.269e-1342.37Glutamate 5-kinase OS=Acaryochloris marina (strain... [more]
PROB_SERP51.658e-1336.44Glutamate 5-kinase OS=Serratia proteamaculans (str... [more]
PROB_SERMA1.658e-1336.44Glutamate 5-kinase OS=Serratia marcescens GN=proB ... [more]
PROB_ENTS81.658e-1336.44Glutamate 5-kinase OS=Enterobacter sakazakii (stra... [more]
PROB_BURVG1.658e-1337.29Glutamate 5-kinase OS=Burkholderia vietnamiensis (... [more]
PROB_BURPP1.658e-1337.29Glutamate 5-kinase OS=Burkholderia phytofirmans (s... [more]
PROB_CYAP82.165e-1338.71Glutamate 5-kinase OS=Cyanothece sp. (strain PCC 8... [more]
PROB_BURP82.165e-1337.29Glutamate 5-kinase OS=Burkholderia phymatum (strai... [more]
PROB_BURM12.165e-1337.29Glutamate 5-kinase OS=Burkholderia multivorans (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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